xBASE Logo
About | Contact | Home

Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05399695.1 CdifQCD-2_020200001042 putative membrane-associated nucleotidase 1 1188 1
CDS - ZP_05399696.1 CdifQCD-2_020200001047 LysR family transcriptional regulator 1336 2211 -1
CDS - ZP_05399697.1 CdifQCD-2_020200001052 chromate transporter 2331 2894 1
CDS - ZP_05399698.1 CdifQCD-2_020200001057 putative chromate transporter 2891 3457 1
CDS - ZP_05399699.1 CdifQCD-2_020200001062 hypothetical protein 3586 4419 -1
CDS - ZP_05399700.1 CdifQCD-2_020200001067 putative DNA repair protein 4604 8032 -1
CDS - ZP_05399701.1 CdifQCD-2_020200001072 putative signaling protein 8681 10909 1
CDS - ZP_05399702.1 CdifQCD-2_020200001077 putative transcription antiterminator 11174 13204 1
CDS - ZP_05399703.1 CdifQCD-2_020200001082 PTS system, IIA component 13201 13653 1
CDS - ZP_05399704.1 CdifQCD-2_020200001087 putative fructose-like permease EIIC subunit 2 13655 14710 1
CDS - ZP_05399705.1 CdifQCD-2_020200001092 putative fructose-like phosphotransferase EIIB subunit 2 14781 15089 1
CDS - ZP_05399706.1 CdifQCD-2_020200001097 putative sugar-phosphate kinase 15193 16458 1
CDS - ZP_05399707.1 CdifQCD-2_020200001102 putative hydrolase 16546 17259 1
CDS - ZP_05399708.1 CdifQCD-2_020200001107 putative spore coat protein 17441 17734 -1
CDS - ZP_05399709.1 CdifQCD-2_020200001112 hypothetical protein 17740 17955 -1
CDS - ZP_05399710.1 CdifQCD-2_020200001117 putative nitroreductase 18505 19017 -1
CDS - ZP_05399711.1 CdifQCD-2_020200001122 phosphoribosylaminoimidazole carboxylase catalytic subunit 19467 19943 1
CDS - ZP_05399712.1 CdifQCD-2_020200001127 phosphoribosylaminoimidazole-succinocarboxamide synthase 19949 20647 1
CDS - ZP_05399713.1 CdifQCD-2_020200001132 amidophosphoribosyltransferase 20659 22026 1
CDS - ZP_05399714.1 CdifQCD-2_020200001137 phosphoribosylformylglycinamidine cyclo-ligase 22020 23096 1
CDS - ZP_05399715.1 CdifQCD-2_020200001142 phosphoribosylglycinamide formyltransferase 23090 23683 1
CDS purH ZP_05399716.1 CdifQCD-2_020200001147 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 23676 25208 1
CDS - ZP_05399717.1 CdifQCD-2_020200001152 phosphoribosylamine--glycine ligase 25219 26469 1
CDS - ZP_05399718.1 CdifQCD-2_020200001157 formylglycinamidine ribonucleotide synthetase 26494 30300 1
CDS - ZP_05399719.1 CdifQCD-2_020200001162 dTDP-4-dehydrorhamnose reductase, rfbD ortholog 30504 31376 1
CDS - ZP_05399720.1 CdifQCD-2_020200001167 glucose-1-phosphate thymidylyltransferase 31485 32354 1
CDS - ZP_05399721.1 CdifQCD-2_020200001172 dTDP-4-dehydrorhamnose 3,5-epimerase 32403 32960 1
CDS - ZP_05399722.1 CdifQCD-2_020200001177 dTDP-glucose 4,6-dehydratase 32998 33981 1
CDS - ZP_05399723.1 CdifQCD-2_020200001182 putative transglycosylase 34019 34687 1
CDS - ZP_05399724.1 CdifQCD-2_020200001187 hypothetical protein 34696 35124 1
CDS - ZP_05399725.1 CdifQCD-2_020200001192 flagellar motor switch protein 35148 35462 1
CDS - ZP_05399726.1 CdifQCD-2_020200001197 negative regulator of flagellin synthesis (anti-sigma-d factor) 35614 35889 1
CDS - ZP_05399727.1 CdifQCD-2_020200001202 putative flagellar biosynthesis protein 35894 36310 1
CDS - ZP_05399728.1 CdifQCD-2_020200001207 putative flagellar hook-associated protein 36328 36705 1
CDS - ZP_05399729.1 CdifQCD-2_020200001212 putative flagellar hook-associated protein 36692 37639 1
CDS - ZP_05399730.1 CdifQCD-2_020200001217 flagellar hook-associated protein 37658 38590 1
CDS - ZP_05399731.1 CdifQCD-2_020200001222 hypothetical protein 38610 38999 1
CDS - ZP_05399732.1 CdifQCD-2_020200001227 carbon storage regulator 38993 39205 1
CDS - ZP_05399733.1 CdifQCD-2_020200001232 flagellar protein FliS 39227 39622 1
CDS - ZP_05399734.1 CdifQCD-2_020200001237 flagellar protein 39622 39978 1
CDS - ZP_05399735.1 CdifQCD-2_020200001242 flagellar cap protein 39999 41522 1
CDS - ZP_05399736.1 CdifQCD-2_020200001247 hypothetical protein 41525 41860 1
CDS - ZP_05399737.1 CdifQCD-2_020200001252 flagellin subunit 41961 42833 1
CDS - ZP_05399738.1 CdifQCD-2_020200001257 putative glycosyltransferase 42926 45067 1
CDS - ZP_05399739.1 CdifQCD-2_020200001262 glycosyl transferase family protein 45091 46968 1
CDS - ZP_05399740.1 CdifQCD-2_020200001267 glycosyl transferase family protein 46961 49075 1
CDS - ZP_05399741.1 CdifQCD-2_020200001272 hypothetical protein 49084 50079 1
CDS - ZP_05399742.1 CdifQCD-2_020200001277 Dehydrogenase 50171 51403 1
CDS - ZP_05399743.1 CdifQCD-2_020200001282 ornithine cyclodeaminase 51423 52367 1
CDS - ZP_05399744.1 CdifQCD-2_020200001287 hypothetical protein 52461 52559 1
CDS - ZP_05399745.1 CdifQCD-2_020200001292 transposase-like protein A 53188 53295 1
CDS - ZP_05399746.1 CdifQCD-2_020200001297 transposase-like protein B 53306 54415 1
CDS - ZP_05399747.1 CdifQCD-2_020200001302 hypothetical protein 54602 55714 1
CDS - ZP_05399748.1 CdifQCD-2_020200001307 heat shock protein 90 55830 57767 1
CDS - ZP_05399749.1 CdifQCD-2_020200001312 putative 1,3-propanediol dehydrogenase 58146 59276 1
CDS - ZP_05399750.1 CdifQCD-2_020200001317 spore photoproduct lyase 59504 60526 1
CDS - ZP_05399751.1 CdifQCD-2_020200001322 AraC family transcription regulator 60693 61604 1
CDS - ZP_05399752.1 CdifQCD-2_020200001327 hypothetical protein 61619 62035 1
CDS - ZP_05399753.1 CdifQCD-2_020200001332 putative transcriptional regulator 62135 62527 -1
CDS - ZP_05399754.1 CdifQCD-2_020200001337 hypothetical protein 62668 63063 1
CDS - ZP_05399755.1 CdifQCD-2_020200001342 hypothetical protein 63464 63670 1
CDS - ZP_05399756.1 CdifQCD-2_020200001347 putative hydrolase 63976 64719 -1
CDS - ZP_05399757.1 CdifQCD-2_020200001352 putative transcription antiterminator 64885 67452 1
CDS - ZP_05399758.1 CdifQCD-2_020200001357 PTS system, IIA component 67682 68086 1
CDS - ZP_05399759.1 CdifQCD-2_020200001362 PTS system, IIB component 68110 68607 1
CDS - ZP_05399760.1 CdifQCD-2_020200001367 putative PTS system, IIA component 68610 69017 1
CDS - ZP_05399761.1 CdifQCD-2_020200001372 PTS system, IIB component 69028 69516 1
CDS - ZP_05399762.1 CdifQCD-2_020200001377 PTS system, IIC component 69543 70298 1
CDS - ZP_05399763.1 CdifQCD-2_020200001382 PTS system, IID component 70298 71161 1
CDS - ZP_05399764.1 CdifQCD-2_020200001387 hypothetical protein 71208 71687 1
CDS - ZP_05399765.1 CdifQCD-2_020200001392 putative peptidase 71752 73059 1
CDS - ZP_05399766.1 CdifQCD-2_020200001397 DNA-binding protein 74008 75102 1
CDS - ZP_05399767.1 CdifQCD-2_020200001402 hypothetical protein 75107 75307 1
CDS - ZP_05399768.1 CdifQCD-2_020200001407 ABC transporter, ATP-binding protein 75307 76224 1
CDS - ZP_05399769.1 CdifQCD-2_020200001412 putative ABC transporter, permease protein 76221 76979 1
CDS - ZP_05399770.1 CdifQCD-2_020200001417 putative iron-sulfur-binding protein 77455 78528 1
CDS - ZP_05399771.1 CdifQCD-2_020200001422 hypothetical protein 78598 78861 1
CDS - ZP_05399772.1 CdifQCD-2_020200001427 putative biotin synthase 79067 80044 1
CDS - ZP_05399773.1 CdifQCD-2_020200001432 putative ribose operon repressor 80272 81285 1
CDS - ZP_05399774.1 CdifQCD-2_020200001437 putative ribokinase 81327 82220 1
CDS - ZP_05399775.1 CdifQCD-2_020200001442 D-ribose ABC transporter, substrate-binding protein 82268 83212 1
CDS - ZP_05399776.1 CdifQCD-2_020200001447 ribose ABC transporter, ATP-binding protein 83282 84793 1
CDS - ZP_05399777.1 CdifQCD-2_020200001452 ribose ABC transporter, permease protein 84777 85775 1
CDS - ZP_05399778.1 CdifQCD-2_020200001457 putative acetylornithine deacetylase 85959 87221 1
CDS - ZP_05399779.1 CdifQCD-2_020200001462 hypothetical protein 87241 87984 1
CDS - ZP_05399780.1 CdifQCD-2_020200001467 putative aminobenzoyl-glutamate utilization protein 88157 89542 1
CDS - ZP_05399781.1 CdifQCD-2_020200001472 hypothetical protein 89754 90593 1
CDS - ZP_05399782.1 CdifQCD-2_020200001477 putative 'four-disulfide core' protein 90583 91026 1
CDS - ZP_05399783.1 CdifQCD-2_020200001482 hypothetical protein 91037 91528 1
CDS - ZP_05399784.1 CdifQCD-2_020200001487 putative phosphoserine phosphatase 91730 92458 -1
CDS - ZP_05399785.1 CdifQCD-2_020200001492 hypothetical protein 92583 93671 1
CDS - ZP_05399786.1 CdifQCD-2_020200001497 hypothetical protein 94109 94999 -1
CDS - ZP_05399787.1 CdifQCD-2_020200001502 transcription regulator ArsR 95199 95564 1
CDS - ZP_05399788.1 CdifQCD-2_020200001507 putative heavy-metal-transporting ATPase 95587 97974 1