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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05399789.1 CdifQCD-2_020200001512 hypothetical protein 162 770 1
CDS - ZP_05399790.1 CdifQCD-2_020200001517 hypothetical protein 1176 2105 1
CDS - ZP_05399791.1 CdifQCD-2_020200001522 hypothetical protein 2119 3891 1
CDS - ZP_05399792.1 CdifQCD-2_020200001527 putative cobalt transport protein 4402 5154 1
CDS - ZP_05399793.1 CdifQCD-2_020200001532 cobalt transport protein 5144 5428 1
CDS - ZP_05399794.1 CdifQCD-2_020200001537 cobalt transport protein 5431 6129 1
CDS - ZP_05399795.1 CdifQCD-2_020200001542 cobalt ABC transporter, ATP-binding protein 6122 6940 1
CDS - ZP_05399796.1 CdifQCD-2_020200001547 ATP-dependent DNA helicase 7193 9457 1
CDS - ZP_05399797.1 CdifQCD-2_020200001552 putative aminopeptidase 2 9474 10772 1
CDS - ZP_05399798.1 CdifQCD-2_020200001557 hypothetical protein 10803 11555 1
CDS - ZP_05399799.1 CdifQCD-2_020200001562 peptidyl-prolyl cis-trans isomerase 11620 12144 1
CDS - ZP_05399800.1 CdifQCD-2_020200001567 hypothetical protein 12724 13005 -1
CDS - ZP_05399801.1 CdifQCD-2_020200001572 putative manganese-dependent inorganic pyrophosphatase 13076 14674 -1
CDS - ZP_05399802.1 CdifQCD-2_020200001577 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 15541 18183 1
CDS - ZP_05399803.1 CdifQCD-2_020200001582 hypothetical protein 18536 18877 -1
CDS - ZP_05399804.1 CdifQCD-2_020200001587 ABC transporter, ATP-binding protein 18904 19575 -1
CDS - ZP_05399805.1 CdifQCD-2_020200001592 ABC transporter, permease protein 19587 22094 -1
CDS - ZP_05399806.1 CdifQCD-2_020200001597 hypothetical protein 22469 27526 -1
CDS - ZP_05399807.1 CdifQCD-2_020200001602 hypothetical protein 27551 27970 -1
CDS - ZP_05399808.1 CdifQCD-2_020200001607 hypothetical protein 28204 28455 -1
CDS - ZP_05399809.1 CdifQCD-2_020200001612 hypothetical protein 28544 29275 1
CDS - ZP_05399810.1 CdifQCD-2_020200001617 metallo-beta-lactamase superfamily protein 29334 30098 1
CDS - ZP_05399811.1 CdifQCD-2_020200001622 putative guanosine 3',5'-bis-pyrophosphate (ppGpp) synthesis/degradation protein 30295 31107 1
CDS - ZP_05399812.1 CdifQCD-2_020200001627 putative phosphoesterase 31216 31908 1
CDS - ZP_05399813.1 CdifQCD-2_020200001632 hypothetical protein 31995 32936 1
CDS - ZP_05399814.1 CdifQCD-2_020200001637 SAM dependent methyltransferase 32973 34130 1
CDS - ZP_05399815.1 CdifQCD-2_020200001642 hypothetical protein 34282 34842 1
CDS - ZP_05399816.1 CdifQCD-2_020200001647 hypothetical protein 34870 35361 1
CDS - ZP_05399817.1 CdifQCD-2_020200001652 putative transcriptional regulator 35586 36137 1
CDS - ZP_05399818.1 CdifQCD-2_020200001657 hypothetical protein 36223 37155 1
CDS - ZP_05399819.1 CdifQCD-2_020200001662 hypothetical protein 37210 38073 1
CDS - ZP_05399820.1 CdifQCD-2_020200001667 PTS system, beta-glucoside-specific IIABC component 38320 40182 1
CDS - ZP_05399821.1 CdifQCD-2_020200001672 6-phospho-beta-glucosidase 40185 41651 1
CDS - ZP_05399822.1 CdifQCD-2_020200001677 beta-glucoside bgl operon transcription antiterminator 41675 42511 1
CDS - ZP_05399823.1 CdifQCD-2_020200001682 asparagine synthetase (glutamine-hydrolyzing) 43078 44661 1
CDS - ZP_05399824.1 CdifQCD-2_020200001687 radical SAM-superfamily protein 44726 45322 -1
CDS - ZP_05399825.1 CdifQCD-2_020200001692 hypothetical protein 45349 45876 -1
CDS - ZP_05399826.1 CdifQCD-2_020200001697 (R)-2-hydroxyisocaproate dehydrogenase 46250 47248 -1
CDS - ZP_05399827.1 CdifQCD-2_020200001702 isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase 47942 49141 1
CDS - ZP_05399828.1 CdifQCD-2_020200001707 activator of 2-hydroxyisocaproyl-CoA dehydratase 49180 49980 1
CDS - ZP_05399829.1 CdifQCD-2_020200001712 subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase 49995 51221 1
CDS - ZP_05399830.1 CdifQCD-2_020200001717 subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase 51221 52348 1
CDS - ZP_05399831.1 CdifQCD-2_020200001722 acyl-CoA dehydrogenase, short-chain specific 52396 53529 1
CDS - ZP_05399832.1 CdifQCD-2_020200001727 electron transfer flavoprotein beta-subunit 53562 54347 1
CDS - ZP_05399833.1 CdifQCD-2_020200001732 electron transfer flavoprotein alpha-subunit 54366 55403 1
CDS - ZP_05399834.1 CdifQCD-2_020200001737 sigma-54-dependent transcriptional regulator 55885 57516 1
CDS - ZP_05399835.1 CdifQCD-2_020200001742 hypothetical protein 57907 58020 1
CDS - ZP_05399836.1 CdifQCD-2_020200001747 putative fructose-bisphosphate aldolase 58131 59057 -1
CDS - ZP_05399837.1 CdifQCD-2_020200001752 hypothetical protein 59387 59716 1
CDS - ZP_05399838.1 CdifQCD-2_020200001757 putative RNA pseudouridine synthase 59716 60141 1
CDS - ZP_05399839.1 CdifQCD-2_020200001762 putative RNA pseudouridine synthase 60128 60439 1
CDS - ZP_05399840.1 CdifQCD-2_020200001767 putative tRNA (Uracil-5-)-methyltransferase 60472 61827 1
CDS - ZP_05399841.1 CdifQCD-2_020200001772 cell surface protein 62076 62696 1
CDS - ZP_05399842.1 CdifQCD-2_020200001777 putative restriction endonuclease 62973 63542 -1
CDS - ZP_05399843.1 CdifQCD-2_020200001782 hypothetical protein 63975 64451 1
CDS - ZP_05399844.1 CdifQCD-2_020200001787 hypothetical protein 64476 65126 1
CDS - ZP_05399845.1 CdifQCD-2_020200001792 hypothetical protein 65077 65370 1
CDS - ZP_05399846.1 CdifQCD-2_020200001797 hypothetical protein 65750 65884 -1
CDS - ZP_05399847.1 CdifQCD-2_020200001802 accessory gene regulator 65902 66483 -1
CDS - ZP_05399848.1 CdifQCD-2_020200001807 two-component sensor histidine kinase 66526 67848 -1
CDS - ZP_05399849.1 CdifQCD-2_020200001812 putative collagen-binding surface protein 68481 68681 1
CDS - ZP_05399850.1 CdifQCD-2_020200001817 hypothetical protein 69561 69707 1
CDS - ZP_05399851.1 CdifQCD-2_020200001822 magnesium transporting ATPase, P-type 1 69806 72469 1
CDS - ZP_05399852.1 CdifQCD-2_020200001827 putative transcriptional regulator 72485 72988 1
CDS - ZP_05399853.1 CdifQCD-2_020200001832 hypothetical protein 73126 73356 1
CDS - ZP_05399854.1 CdifQCD-2_020200001837 hypothetical protein 73372 73683 1
CDS - ZP_05399855.1 CdifQCD-2_020200001842 magnesium transporting ATPase, P-type 73848 76613 1
CDS - ZP_05399856.1 CdifQCD-2_020200001847 hypothetical protein 76626 76793 1
CDS - ZP_05399857.1 CdifQCD-2_020200001852 NADPH-dependent FMN reductase 77463 78038 -1
CDS - ZP_05399858.1 CdifQCD-2_020200001857 hypothetical protein 78089 78241 -1
CDS - ZP_05399859.1 CdifQCD-2_020200001862 L-rhamnose 1-epimerase 78976 79296 -1
CDS - ZP_05399860.1 CdifQCD-2_020200001867 helix-turn-helix domain-containing protein 79482 79949 1
CDS - ZP_05399861.1 CdifQCD-2_020200001872 AraC family transcriptional regulator 80099 80545 1
CDS - ZP_05399862.1 CdifQCD-2_020200001877 helix-turn-helix domain-containing protein 80526 80942 1
CDS - ZP_05399863.1 CdifQCD-2_020200001882 Cystathionine gamma-lyase 81043 81321 1
CDS - ZP_05399864.1 CdifQCD-2_020200001887 hypothetical protein 82003 83961 1
CDS - ZP_05399865.1 CdifQCD-2_020200001892 putative arginine utilization sigma-54 dependent regulatory protein 84468 85868 1
CDS - ZP_05399866.1 CdifQCD-2_020200001897 putative oxidoreductase 86128 87195 1
CDS - ZP_05399867.1 CdifQCD-2_020200001902 hypothetical protein 87293 87601 1
CDS - ZP_05399868.1 CdifQCD-2_020200001907 putative pyridoxal-phosphate dependent enzyme 87594 89024 1
CDS - ZP_05399869.1 CdifQCD-2_020200001912 D-ornithine aminomutase S component 89102 89476 1
CDS - ZP_05399870.1 CdifQCD-2_020200001917 D-ornithine aminomutase E component 89470 91674 1
CDS - ZP_05399871.1 CdifQCD-2_020200001922 putative component of D-ornithine aminomutase 91674 93083 1
CDS - ZP_05399872.1 CdifQCD-2_020200001927 putative amino acid racemase 93068 94132 1
CDS - ZP_05399873.1 CdifQCD-2_020200001932 Na+/H+ antiporter 94162 95583 1
CDS - ZP_05399874.1 CdifQCD-2_020200001937 hypothetical protein 95893 96357 1
CDS - ZP_05399875.1 CdifQCD-2_020200001942 hypothetical protein 96577 96939 1
CDS - ZP_05399876.1 CdifQCD-2_020200001947 putative DNA repair protein 97007 97621 1
CDS - ZP_05399877.1 CdifQCD-2_020200001952 AraC family transcription regulator 97812 98672 1
CDS - ZP_05399878.1 CdifQCD-2_020200001957 hypothetical protein 98919 101033 1
CDS - ZP_05399879.1 CdifQCD-2_020200001962 putative beta-lactamase 101573 102505 1
CDS - ZP_05399880.1 CdifQCD-2_020200001967 ABC transporter, ATP-binding protein 102854 103537 1
CDS - ZP_05399881.1 CdifQCD-2_020200001972 ABC transporter, permease protein 103534 106194 1
CDS - ZP_05399882.1 CdifQCD-2_020200001977 two-component sensor histidine kinase 106371 107552 -1
CDS - ZP_05399883.1 CdifQCD-2_020200001982 two-component response regulator 107552 108214 -1
CDS - ZP_05399884.1 CdifQCD-2_020200001987 TetR family transcriptional regulator 108330 108968 -1
CDS - ZP_05399885.1 CdifQCD-2_020200001992 putative hydrolase 109148 109753 1
CDS - ZP_05399886.1 CdifQCD-2_020200001997 PadR-like family transcriptional regulator 109854 110576 1
CDS - ZP_05399887.1 CdifQCD-2_020200002002 ABC-type multidrug transport system (daunorubicin resistance), ATPase component 110678 111436 1
CDS - ZP_05399888.1 CdifQCD-2_020200002007 integral membrane protein 111441 112181 1