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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05400463.1 CdifQCD-2_020200005035 cell surface protein (putative N-acetylmuramoyl-L-alanine amidase) 1 1016 1
CDS - ZP_05400464.1 CdifQCD-2_020200005040 hypothetical protein 1248 3161 1
CDS - ZP_05400465.1 CdifQCD-2_020200005045 putative helicase 3154 5373 1
CDS - ZP_05400466.1 CdifQCD-2_020200005050 hypothetical protein 5482 6312 1
CDS - ZP_05400467.1 CdifQCD-2_020200005055 ATP-dependent nuclease subunit B 6302 9769 1
CDS - ZP_05400468.1 CdifQCD-2_020200005060 ATP-dependent nuclease subunit A 9769 13596 1
CDS - ZP_05400469.1 CdifQCD-2_020200005065 nuclease subunit D 13640 14851 1
CDS - ZP_05400470.1 CdifQCD-2_020200005070 exonuclease subunit C 14838 18365 1
CDS - ZP_05400471.1 CdifQCD-2_020200005075 putative modulator of ions transport 18496 19749 1
CDS - ZP_05400472.1 CdifQCD-2_020200005080 hypothetical protein 19897 20949 1
CDS - ZP_05400473.1 CdifQCD-2_020200005085 peptidase T 21042 22268 1
CDS - ZP_05400474.1 CdifQCD-2_020200005090 cell surface protein 22475 23527 1
CDS - ZP_05400475.1 CdifQCD-2_020200005095 phosphodiesterase 23785 24354 -1
CDS - ZP_05400476.1 CdifQCD-2_020200005100 putative inorganic polyphosphate/ATP-NAD kinase 24379 25179 -1
CDS - ZP_05400477.1 CdifQCD-2_020200005105 ABC transporter, ATP-binding protein 25313 26173 1
CDS - ZP_05400478.1 CdifQCD-2_020200005110 putative ABC transporter, permease protein 26173 26859 1
CDS - ZP_05400479.1 CdifQCD-2_020200005115 hypothetical protein 26911 27453 1
CDS - ZP_05400480.1 CdifQCD-2_020200005120 putative regulatory protein 27532 27996 1
CDS - ZP_05400481.1 CdifQCD-2_020200005125 butyryl-CoA dehydrogenase 28708 29844 1
CDS - ZP_05400482.1 CdifQCD-2_020200005130 electron transfer flavoprotein beta-subunit 29903 30685 1
CDS - ZP_05400483.1 CdifQCD-2_020200005135 electron transfer flavoprotein alpha-subunit 30704 31714 1
CDS - ZP_05400484.1 CdifQCD-2_020200005140 3-hydroxybutyryl-CoA dehydratase 31733 32530 1
CDS - ZP_05400485.1 CdifQCD-2_020200005145 3-hydroxybutyryl-CoA dehydrogenase 32628 33473 1
CDS - ZP_05400486.1 CdifQCD-2_020200005150 acetyl-CoA acetyltransferase 33561 34736 1
CDS - ZP_05400487.1 CdifQCD-2_020200005155 putative pseudouridylate synthase 34933 35835 1
CDS - ZP_05400488.1 CdifQCD-2_020200005160 hypothetical protein 35849 36853 1
CDS - ZP_05400489.1 CdifQCD-2_020200005165 acyl carrier protein 36994 37221 -1
CDS - ZP_05400490.1 CdifQCD-2_020200005170 hypothetical protein 37393 37818 1
CDS - ZP_05400491.1 CdifQCD-2_020200005175 hypothetical protein 37866 38072 1
CDS - ZP_05400492.1 CdifQCD-2_020200005180 hypothetical protein 38254 38433 1
CDS - ZP_05400493.1 CdifQCD-2_020200005185 hypothetical protein 38467 38667 1
CDS - ZP_05400494.1 CdifQCD-2_020200005190 LacI family transcriptional regulator 38920 39936 1
CDS - ZP_05400495.1 CdifQCD-2_020200005195 hypothetical protein 40058 40456 -1
CDS - ZP_05400496.1 CdifQCD-2_020200005200 hypothetical protein 40668 41579 1
CDS - ZP_05400497.1 CdifQCD-2_020200005205 hypothetical protein 42059 43291 1
CDS - ZP_05400498.1 CdifQCD-2_020200005210 putative polysaccharide biosynthesis/sporulation protein 43391 44713 -1
CDS - ZP_05400499.1 CdifQCD-2_020200005215 putative phosphatase 44763 45494 -1
CDS - ZP_05400500.1 CdifQCD-2_020200005230 hypothetical protein 47139 47348 1
CDS - ZP_05400501.1 CdifQCD-2_020200005235 putative aminopeptidase 1 47368 48762 1
CDS - ZP_05400502.1 CdifQCD-2_020200005240 GntR family transcriptional regulator 49002 49754 1
CDS - ZP_05400503.1 CdifQCD-2_020200005245 PTS system, IIA component 49779 50192 1
CDS - ZP_05400504.1 CdifQCD-2_020200005250 hypothetical protein 50249 50938 1
CDS - ZP_05400505.1 CdifQCD-2_020200005255 PTS system, IIB component 50938 51408 1
CDS - ZP_05400506.1 CdifQCD-2_020200005260 PTS system, IIC component 51425 52183 1
CDS - ZP_05400507.1 CdifQCD-2_020200005265 PTS system, IID component 52167 53009 1
CDS - ZP_05400508.1 CdifQCD-2_020200005270 LysR family transcriptional regulator 53169 54074 -1
CDS - ZP_05400509.1 CdifQCD-2_020200005275 putative lipoprotein 54437 55171 1
CDS - ZP_05400510.1 CdifQCD-2_020200005280 molybdopterin biosynthesis protein 55383 56564 1
CDS - ZP_05400511.1 CdifQCD-2_020200005285 molybdopterin-guanine dinucleotide biosynthesis protein B 56587 57120 1
CDS - ZP_05400512.1 CdifQCD-2_020200005290 PTS system, IIB component 57239 57514 1
CDS - ZP_05400513.1 CdifQCD-2_020200005295 ABC transporter, ATP-binding/permease protein 57754 59454 1
CDS - ZP_05400514.1 CdifQCD-2_020200005300 hypothetical protein 59817 61004 1
CDS - ZP_05400515.1 CdifQCD-2_020200005305 putative peptidase 61064 62227 1
CDS - ZP_05400516.1 CdifQCD-2_020200005310 zinc transporter ZupT 62378 63181 1
CDS - ZP_05400517.1 CdifQCD-2_020200005315 hypothetical protein 63286 63837 1
CDS - ZP_05400518.1 CdifQCD-2_020200005320 two-component response regulator 64084 64797 1
CDS - ZP_05400519.1 CdifQCD-2_020200005325 sensor histidine kinase VirS 64791 66170 1
CDS - ZP_05400520.1 CdifQCD-2_020200005330 putative lipoprotein 66411 67100 1
CDS - ZP_05400521.1 CdifQCD-2_020200005335 glycerol dehydratase 67321 69693 1
CDS - ZP_05400522.1 CdifQCD-2_020200005340 glycerol dehydratase activator 69708 70610 1
CDS - ZP_05400523.1 CdifQCD-2_020200005345 putative transcriptional regulator 70630 71181 1
CDS - ZP_05400524.1 CdifQCD-2_020200005350 putative phosphoesterase 71345 72217 1
CDS - ZP_05400525.1 CdifQCD-2_020200005355 hypothetical protein 72381 73361 1
CDS - ZP_05400526.1 CdifQCD-2_020200005360 hypothetical protein 73442 73579 1
CDS - ZP_05400527.1 CdifQCD-2_020200005365 hypothetical protein 73861 74082 1
CDS - ZP_05400528.1 CdifQCD-2_020200005370 nitroreductase-family protein 74588 75457 1
CDS - ZP_05400529.1 CdifQCD-2_020200005375 AraC family transcription regulator 75682 76548 1
CDS - ZP_05400530.1 CdifQCD-2_020200005380 transcriptional regulator 76740 76937 1
CDS - ZP_05400531.1 CdifQCD-2_020200005385 hypothetical protein 76940 77383 1
CDS - ZP_05400532.1 CdifQCD-2_020200005390 hypothetical protein 77903 78283 -1
CDS - ZP_05400533.1 CdifQCD-2_020200005395 hypothetical protein 78400 79593 -1
CDS - ZP_05400534.1 CdifQCD-2_020200005400 AlgI 79609 81018 -1
CDS - ZP_05400535.1 CdifQCD-2_020200005405 hypothetical protein 81530 81643 1
tRNA - - CdifQCD-2_020200t06497 tRNA-Leu 81707 81789 -1
CDS - ZP_05400536.1 CdifQCD-2_020200005410 DNA polymerase I 82108 84756 1
CDS - ZP_05400537.1 CdifQCD-2_020200005415 putative dephospho-CoA kinase 84765 85367 1
CDS - ZP_05400538.1 CdifQCD-2_020200005420 putative transglycosylase 85360 85914 1
CDS - ZP_05400539.1 CdifQCD-2_020200005425 putative solute-binding lipoprotein 85914 87629 1
CDS - ZP_05400540.1 CdifQCD-2_020200005430 putative heavy-metal binding protein 87702 87914 1
CDS - ZP_05400541.1 CdifQCD-2_020200005435 hypothetical protein 88115 88714 1
CDS - ZP_05400542.1 CdifQCD-2_020200005440 lactoylglutathione lyase 88941 89312 1
CDS - ZP_05400543.1 CdifQCD-2_020200005445 putative cell wall hydrolase 89444 90718 1
CDS - ZP_05400544.1 CdifQCD-2_020200005450 hypothetical protein 90829 91773 1
CDS - ZP_05400545.1 CdifQCD-2_020200005455 electron transport complex protein 91989 93326 1
CDS - ZP_05400546.1 CdifQCD-2_020200005460 electron transport complex protein 93349 94326 1
CDS - ZP_05400547.1 CdifQCD-2_020200005465 electron transport complex protein 94326 94895 1
CDS - ZP_05400548.1 CdifQCD-2_020200005470 electron transport complex protein 94908 95501 1
CDS - ZP_05400549.1 CdifQCD-2_020200005475 electron transport complex protein 95516 96091 1
CDS - ZP_05400550.1 CdifQCD-2_020200005480 electron transport complex protein 96107 97078 1
CDS - ZP_05400551.1 CdifQCD-2_020200005485 septum formation protein 97298 97882 1
CDS - ZP_05400552.1 CdifQCD-2_020200005490 DNA repair protein 97927 98586 1
CDS - ZP_05400553.1 CdifQCD-2_020200005495 rod shape-determining protein MreB 98706 99716 1
CDS - ZP_05400554.1 CdifQCD-2_020200005500 putative rod shape-determining protein 99726 100619 1
CDS - ZP_05400555.1 CdifQCD-2_020200005505 hypothetical protein 100634 101122 1
CDS - ZP_05400556.1 CdifQCD-2_020200005510 putative penicillin-binding protein 101134 103743 1
CDS - ZP_05400557.1 CdifQCD-2_020200005515 putative penicillin-binding protein 104010 104111 1
CDS - ZP_05400558.1 CdifQCD-2_020200005520 septum site-determining protein 104209 104892 1
CDS - ZP_05400559.1 CdifQCD-2_020200005525 septum site-determining protein (cell division inhibitor) 104916 105713 1
CDS - ZP_05400560.1 CdifQCD-2_020200005530 cell division topological specificity factor MinE 105731 106015 1
CDS - ZP_05400561.1 CdifQCD-2_020200005535 rod shape-determining protein 106099 107229 1