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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05400828.1 CdifQCD-2_020200006892 ABC transporter, ATP-binding protein 25 1281 -1
CDS - ZP_05400829.1 CdifQCD-2_020200006897 hypothetical protein 1238 2020 -1
CDS ddl ZP_05400830.1 CdifQCD-2_020200006912 D-alanine--D-alanine ligase 3574 4473 -1
CDS - ZP_05400831.1 CdifQCD-2_020200006917 competence damage-inducible protein A 4731 5987 1
CDS - ZP_05400832.1 CdifQCD-2_020200006922 putative hydrolase 6045 6824 1
CDS - ZP_05400833.1 CdifQCD-2_020200006927 hypothetical protein 6918 7502 -1
CDS - ZP_05400834.1 CdifQCD-2_020200006932 sigma-54 dependent regulatory protein 7925 9145 -1
CDS - ZP_05400835.1 CdifQCD-2_020200006937 hypothetical protein 9463 10407 1
CDS - ZP_05400836.1 CdifQCD-2_020200006942 putative radical SAM-superfamily protein 10709 11644 -1
CDS - ZP_05400837.1 CdifQCD-2_020200006947 hypothetical protein 11819 11929 1
CDS - ZP_05400838.1 CdifQCD-2_020200006952 hypothetical protein 12469 12897 1
CDS - ZP_05400839.1 CdifQCD-2_020200006957 putative ATP-binding protein 12982 13632 1
CDS - ZP_05400840.1 CdifQCD-2_020200006962 putative drug/sodium antiporter 13750 15105 -1
CDS - ZP_05400841.1 CdifQCD-2_020200006967 phage integrase 15296 15640 -1
CDS - ZP_05400842.1 CdifQCD-2_020200006972 putative signaling protein 16107 17840 -1
CDS - ZP_05400843.1 CdifQCD-2_020200006977 putative signaling protein 18080 18925 -1
CDS - ZP_05400844.1 CdifQCD-2_020200006982 putative signaling protein 18956 21190 -1
CDS - ZP_05400845.1 CdifQCD-2_020200006987 MerR family transcriptional regulator 21966 22775 1
CDS - ZP_05400846.1 CdifQCD-2_020200006992 hypothetical protein 22884 23093 -1
CDS - ZP_05400847.1 CdifQCD-2_020200006997 hypothetical protein 23579 24253 -1
CDS - ZP_05400848.1 CdifQCD-2_020200007002 hypothetical protein 24656 24790 1
CDS - ZP_05400849.1 CdifQCD-2_020200007007 hypothetical protein 24890 25675 1
CDS - ZP_05400850.1 CdifQCD-2_020200007012 putative exported polysaccharide deacetylase 25771 26595 -1
CDS - ZP_05400851.1 CdifQCD-2_020200007017 putative exonuclease 26818 29937 1
CDS - ZP_05400852.1 CdifQCD-2_020200007022 putative ribonuclease 29954 30553 1
CDS - ZP_05400853.1 CdifQCD-2_020200007027 putative bifunctional protein: peroxiredoxin/chitinase 30766 32895 -1
CDS - ZP_05400854.1 CdifQCD-2_020200007032 hypothetical protein 33128 33409 1
CDS - ZP_05400855.1 CdifQCD-2_020200007037 hypothetical protein 33575 34966 1
CDS - ZP_05400856.1 CdifQCD-2_020200007042 hypothetical protein 35081 36535 1
CDS - ZP_05400857.1 CdifQCD-2_020200007047 putative sigma-54-dependent transcriptional regulator (partial) 36600 37193 1
CDS - ZP_05400858.1 CdifQCD-2_020200007062 hypothetical protein 38903 39274 1
CDS - ZP_05400859.1 CdifQCD-2_020200007067 hypothetical protein 39267 39956 1
CDS - ZP_05400860.1 CdifQCD-2_020200007072 hypothetical protein 40476 41342 1
CDS - ZP_05400861.1 CdifQCD-2_020200007077 hypothetical protein 41584 42393 1
CDS - ZP_05400862.1 CdifQCD-2_020200007082 hypothetical protein 42534 43598 1
CDS - ZP_05400863.1 CdifQCD-2_020200007087 putative exported polysaccharide deacetylase 43626 44345 1
CDS - ZP_05400864.1 CdifQCD-2_020200007092 para-aminobenzoate synthase glutamine amidotransferase component II 44368 44952 1
CDS - ZP_05400865.1 CdifQCD-2_020200007097 para-aminobenzoate synthase component I 44954 46303 1
CDS - ZP_05400866.1 CdifQCD-2_020200007102 putative aminodeoxychorismate lyase 46293 47036 1
CDS - ZP_05400867.1 CdifQCD-2_020200007107 hypothetical protein 47070 47771 1
CDS folE ZP_05400868.1 CdifQCD-2_020200007112 GTP cyclohydrolase I 47797 48369 1
CDS - ZP_05400869.1 CdifQCD-2_020200007117 dihydropteroate synthase 48435 49226 1
CDS - ZP_05400870.1 CdifQCD-2_020200007122 dihydroneopterin aldolase 49207 49602 1
CDS - ZP_05400871.1 CdifQCD-2_020200007127 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase 49595 50101 1
CDS - ZP_05400872.1 CdifQCD-2_020200007132 chorismate biosynthesis-related protein 50082 50867 1
CDS dnaG ZP_05400873.1 CdifQCD-2_020200007137 DNA primase 51122 52912 1
CDS - ZP_05400874.1 CdifQCD-2_020200007142 RNA polymerase sigma factor (sigma-43) 52930 54096 1
CDS - ZP_05400875.1 CdifQCD-2_020200007147 hypothetical protein 54258 54947 1
CDS - ZP_05400876.1 CdifQCD-2_020200007152 hypothetical protein 54961 56058 1
CDS - ZP_05400877.1 CdifQCD-2_020200007157 putative flavoprotein 56120 56692 1
CDS - ZP_05400878.1 CdifQCD-2_020200007162 putative 5-nitroimidazole reductase 56752 57219 -1
CDS - ZP_05400879.1 CdifQCD-2_020200007167 putative phosphohydrolase 57605 58081 -1
CDS - ZP_05400880.1 CdifQCD-2_020200007172 hypothetical protein 58198 59289 -1
CDS - ZP_05400881.1 CdifQCD-2_020200007177 GntR family transcriptional regulator 59282 59671 -1
CDS - ZP_05400882.1 CdifQCD-2_020200007182 hypothetical protein 59863 60144 1
CDS - ZP_05400883.1 CdifQCD-2_020200007187 hypothetical protein 60110 60310 1
CDS - ZP_05400884.1 CdifQCD-2_020200007192 two-component response regulator 60556 61281 1
CDS - ZP_05400885.1 CdifQCD-2_020200007197 two-component sensor kinase 61268 62512 1
CDS - ZP_05400886.1 CdifQCD-2_020200007202 ABC transporter, ATP-binding protein 62592 63269 1
CDS - ZP_05400887.1 CdifQCD-2_020200007207 ABC transporter, permease protein 63270 65831 1
CDS - ZP_05400888.1 CdifQCD-2_020200007212 putative iron-sulfur protein 66051 67325 1
CDS - ZP_05400889.1 CdifQCD-2_020200007217 cell surface protein (putative penicillin-binding protein) 67487 70528 -1
CDS - ZP_05400890.1 CdifQCD-2_020200007222 putative phage shock protein 70735 71034 1
CDS - ZP_05400891.1 CdifQCD-2_020200007227 putative membrane protein (putative phage infection protein) 71270 73261 -1
CDS - ZP_05400892.1 CdifQCD-2_020200007232 ABC transporter, ATP-binding/permease protein 73790 75565 1
CDS - ZP_05400893.1 CdifQCD-2_020200007237 ABC transporter, ATP-binding/permease protein 75578 77401 1
CDS - ZP_05400894.1 CdifQCD-2_020200007242 putative ruberythrin 77519 78064 1
CDS - ZP_05400895.1 CdifQCD-2_020200007247 putative hydrolase 78327 78932 1
CDS - ZP_05400896.1 CdifQCD-2_020200007252 putative signaling protein 79258 82155 1
CDS - ZP_05400897.1 CdifQCD-2_020200007257 putative ferrous iron transport protein 82476 82688 1
CDS - ZP_05400898.1 CdifQCD-2_020200007262 putative ferrous iron transport protein A 82701 82922 1
CDS - ZP_05400899.1 CdifQCD-2_020200007267 ferrous iron transport protein B 83025 85181 1
CDS - ZP_05400900.1 CdifQCD-2_020200007272 hypothetical protein 85207 85359 1
CDS - ZP_05400901.1 CdifQCD-2_020200007277 hypothetical protein 86348 87043 1
CDS - ZP_05400902.1 CdifQCD-2_020200007292 putative aliphatic sulfonates ABC transporter,ATP-binding protein 87890 88621 1
CDS - ZP_05400903.1 CdifQCD-2_020200007297 putative aliphatic sulfonates ABC transporter,substrate-binding lipoprotein 88622 88744 1
CDS - ZP_05400904.1 CdifQCD-2_020200007302 putative aliphatic sulfonates ABC transporter,substrate-binding lipoprotein 88707 89615 1
CDS - ZP_05400905.1 CdifQCD-2_020200007307 hypothetical protein 89712 90308 -1
CDS - ZP_05400906.1 CdifQCD-2_020200007312 putative lipoprotein 90553 91152 1
CDS - ZP_05400907.1 CdifQCD-2_020200007317 hypothetical protein 91431 91718 -1
CDS - ZP_05400908.1 CdifQCD-2_020200007322 putative transcriptional regulator 91874 92452 1
CDS - ZP_05400909.1 CdifQCD-2_020200007327 D-methionine ABC transporter, ATP-binding protein 92830 93795 1
CDS - ZP_05400910.1 CdifQCD-2_020200007332 putative D-methionine ABC transporter, permease protein 93788 94444 1
CDS - ZP_05400911.1 CdifQCD-2_020200007337 putative D-methionine ABC transporter,substrate-binding lipoprotein 94481 95272 1
CDS - ZP_05400912.1 CdifQCD-2_020200007342 putative two-component sensor histidine kinase 95420 98158 1
CDS - ZP_05400913.1 CdifQCD-2_020200007347 putative 3-methyladenine DNA glycosylase 98267 98875 1
CDS - ZP_05400914.1 CdifQCD-2_020200007352 putative transcriptional regulator 99760 100344 1
CDS - ZP_05400915.1 CdifQCD-2_020200007357 pyrroline-5-carboxylate reductase 100384 101187 1
CDS - ZP_05400916.1 CdifQCD-2_020200007362 hypothetical protein 101268 102443 -1
CDS - ZP_05400917.1 CdifQCD-2_020200007367 hypothetical protein 102709 103185 1
CDS - ZP_05400918.1 CdifQCD-2_020200007372 RNA polymerase sigma factor rpoD 103476 104360 1
CDS - ZP_05400919.1 CdifQCD-2_020200007377 ferric uptake regulator, Fur family protein 104835 105251 -1
CDS - ZP_05400920.1 CdifQCD-2_020200007382 periplasmic solute binding protein 105401 106303 1
CDS - ZP_05400921.1 CdifQCD-2_020200007387 putative amino acid ABC transporter, ATP-binding protein 106318 106950 1
CDS - ZP_05400922.1 CdifQCD-2_020200007392 hypothetical protein 106943 107731 1
CDS - ZP_05400923.1 CdifQCD-2_020200007397 cobalamin synthesis protein P47K 107787 108716 1
CDS - ZP_05400924.1 CdifQCD-2_020200007402 permease 108717 109259 1
CDS - ZP_05400925.1 CdifQCD-2_020200007407 hypothetical protein 109385 109897 1
CDS - ZP_05400926.1 CdifQCD-2_020200007412 permease 109918 110271 1
CDS - ZP_05400927.1 CdifQCD-2_020200007417 hypothetical protein 110406 111176 1