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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05401175.1 CdifQCD-2_020200008699 hypothetical protein 1 174 1
CDS - ZP_05401176.1 CdifQCD-2_020200008704 putative 2-hydroxyacyl-CoA dehydratase 383 1534 1
CDS - ZP_05401177.1 CdifQCD-2_020200008709 putative (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit 1559 2314 1
CDS - ZP_05401178.1 CdifQCD-2_020200008714 cell surface protein (putative cell surface-associated cysteine protease) 2506 4893 1
CDS - ZP_05401179.1 CdifQCD-2_020200008719 hypothetical protein 5116 5349 -1
CDS - ZP_05401180.1 CdifQCD-2_020200008724 TetR family transcriptional regulator 5639 6229 1
CDS - ZP_05401181.1 CdifQCD-2_020200008729 ABC transporter, ATP-binding protein 6342 7187 1
CDS - ZP_05401182.1 CdifQCD-2_020200008734 putative ABC transporter, permease protein 7184 7867 1
CDS - ZP_05401183.1 CdifQCD-2_020200008739 putative ABC transporter, permease protein 7864 8580 1
CDS - ZP_05401184.1 CdifQCD-2_020200008744 putative transcriptional regulator 8662 8940 1
CDS - ZP_05401185.1 CdifQCD-2_020200008749 peptide deformylase 1 8912 9367 1
CDS - ZP_05401186.1 CdifQCD-2_020200008754 hypothetical protein 9428 9889 1
CDS - ZP_05401187.1 CdifQCD-2_020200008759 radical SAM-superfamily protein 9939 10841 1
CDS - ZP_05401188.1 CdifQCD-2_020200008774 putative iron-sulfur protein 13071 13832 1
CDS - ZP_05401189.1 CdifQCD-2_020200008779 hypothetical protein 14196 14663 1
CDS - ZP_05401190.1 CdifQCD-2_020200008784 hypothetical protein 14949 15368 1
CDS - ZP_05401191.1 CdifQCD-2_020200008789 hypothetical protein 15492 15734 -1
CDS - ZP_05401192.1 CdifQCD-2_020200008794 hypothetical protein 15961 16662 1
CDS - ZP_05401193.1 CdifQCD-2_020200008799 Nudix-family hydrolase 16744 17352 1
CDS - ZP_05401194.1 CdifQCD-2_020200008804 putative lipoprotein 17676 18140 1
CDS - ZP_05401195.1 CdifQCD-2_020200008809 glyceraldehyde-3-phosphate dehydrogenase 1 18528 19544 1
CDS - ZP_05401196.1 CdifQCD-2_020200008814 hypothetical protein 19940 21109 1
CDS - ZP_05401197.1 CdifQCD-2_020200008819 hypothetical protein 21491 25744 1
CDS - ZP_05401198.1 CdifQCD-2_020200008824 methylated-DNA--protein-cysteine methyltransferase 2 25893 26387 1
CDS - ZP_05401199.1 CdifQCD-2_020200008829 hypothetical protein 26503 26880 1
CDS - ZP_05401200.1 CdifQCD-2_020200008834 hypothetical protein 27087 27527 1
CDS - ZP_05401201.1 CdifQCD-2_020200008839 hypothetical protein 28159 29466 1
CDS - ZP_05401202.1 CdifQCD-2_020200008844 amino acid ABC transporter, substrate-binding protein 29944 30747 1
CDS - ZP_05401203.1 CdifQCD-2_020200008849 amino acid ABC transporter, permease protein 30785 31396 1
CDS - ZP_05401204.1 CdifQCD-2_020200008854 amino acid ABC transporter, ATP-binding protein 31427 32098 1
CDS - ZP_05401205.1 CdifQCD-2_020200008859 putative arsenate reductase 32393 32755 1
CDS - ZP_05401206.1 CdifQCD-2_020200008864 hypothetical protein 33190 33891 1
CDS - ZP_05401207.1 CdifQCD-2_020200008869 hypothetical protein 34215 35018 1
CDS - ZP_05401208.1 CdifQCD-2_020200008874 putative methylase 35073 36221 1
CDS - ZP_05401209.1 CdifQCD-2_020200008879 putative lipoprotein 36357 37745 1
CDS - ZP_05401210.1 CdifQCD-2_020200008884 two-component response regulator 37774 38472 1
CDS - ZP_05401211.1 CdifQCD-2_020200008889 two-component sensor histidine kinase 38475 39908 1
CDS - ZP_05401212.1 CdifQCD-2_020200008894 tRNA pseudouridine synthase A 39930 40667 1
CDS - ZP_05401213.1 CdifQCD-2_020200008899 argininosuccinate synthase 41238 42437 1
CDS - ZP_05401214.1 CdifQCD-2_020200008904 hypothetical protein 42687 43733 1
CDS - ZP_05401215.1 CdifQCD-2_020200008909 MerR family transcriptional regulator 43839 45002 1
CDS - ZP_05401216.1 CdifQCD-2_020200008914 hypothetical protein 45091 45471 -1
CDS - ZP_05401217.1 CdifQCD-2_020200008919 hypothetical protein 45474 46133 -1
CDS - ZP_05401218.1 CdifQCD-2_020200008924 putative exonuclease 46239 47213 -1
CDS - ZP_05401219.1 CdifQCD-2_020200008929 hypothetical protein 47253 47600 -1
CDS - ZP_05401220.1 CdifQCD-2_020200008934 putative L-threonine dehydrogenase 47819 48775 -1
CDS - ZP_05401221.1 CdifQCD-2_020200008939 hypothetical protein 49204 49572 1
CDS - ZP_05401222.1 CdifQCD-2_020200008944 hypothetical protein 49996 50241 1
CDS - ZP_05401223.1 CdifQCD-2_020200008949 hypothetical protein 50340 50603 1
CDS - ZP_05401224.1 CdifQCD-2_020200008954 putative nitrite and sulfite reductase subunit 50880 51827 -1
CDS - ZP_05401225.1 CdifQCD-2_020200008959 putative pyridine nucleotide-disulfide oxidoreductase 51830 53458 -1
CDS - ZP_05401226.1 CdifQCD-2_020200008964 LysR family transcriptional regulator 53588 54505 1
CDS - ZP_05401227.1 CdifQCD-2_020200008969 tellurium resistance protein 54567 55148 -1
CDS - ZP_05401228.1 CdifQCD-2_020200008974 tellurium resistance protein 55187 55753 -1
CDS - ZP_05401229.1 CdifQCD-2_020200008979 hypothetical protein 56022 56876 -1
CDS - ZP_05401230.1 CdifQCD-2_020200008984 putative hydrolase 57031 57924 1
CDS - ZP_05401231.1 CdifQCD-2_020200008989 sucrose operon repressor 58407 59393 1
CDS - ZP_05401232.1 CdifQCD-2_020200008994 PTS system, sucrose-specific IIBC component 59562 60992 1
CDS - ZP_05401233.1 CdifQCD-2_020200008999 putative sucrose-6-phosphate hydrolase 61084 62565 1
CDS - ZP_05401234.1 CdifQCD-2_020200009004 putative fructokinase 62591 63562 1
CDS - ZP_05401235.1 CdifQCD-2_020200009009 putative NADPH-dependent FMN reductase 63838 64440 -1
CDS - ZP_05401236.1 CdifQCD-2_020200009029 putative regulatory protein 66313 66690 1
CDS - ZP_05401237.1 CdifQCD-2_020200009034 putative two-component sensor histidine kinase (partial) 67219 67878 1
CDS - ZP_05401238.1 CdifQCD-2_020200009039 putative two-component system response regulator (partial) 68171 68512 1
CDS - ZP_05401239.1 CdifQCD-2_020200009044 hypothetical protein 68663 69076 1
CDS - ZP_05401240.1 CdifQCD-2_020200009049 putative phosphoglycerate mutase 69276 69917 1
CDS - ZP_05401241.1 CdifQCD-2_020200009054 hypothetical protein 69941 71194 1
CDS - ZP_05401242.1 CdifQCD-2_020200009059 cytidylate kinase 71240 71890 1
CDS - ZP_05401243.1 CdifQCD-2_020200009064 putative acyltransferase 71941 72537 1
CDS - ZP_05401244.1 CdifQCD-2_020200009079 hypothetical protein 73713 73844 1
CDS - ZP_05401245.1 CdifQCD-2_020200009084 hypothetical protein 73844 74797 1
CDS - ZP_05401246.1 CdifQCD-2_020200009089 adenine deaminase 75096 76793 1
CDS - ZP_05401247.1 CdifQCD-2_020200009094 putative thiol peroxidase (bacterioferritin comigratory protein) 77035 77493 1
CDS - ZP_05401248.1 CdifQCD-2_020200009099 hypothetical protein 77509 78252 1
CDS - ZP_05401249.1 CdifQCD-2_020200009104 putative cations-transporting ATPase 78380 81040 1
CDS - ZP_05401250.1 CdifQCD-2_020200009109 putative O-acetylhomoserine sulfhydrylase 81300 82565 1
CDS - ZP_05401251.1 CdifQCD-2_020200009114 homoserine O-succinyltransferase 82595 83485 1
CDS - ZP_05401252.1 CdifQCD-2_020200009119 MarR family transcriptional regulator 83779 84222 1
CDS - ZP_05401253.1 CdifQCD-2_020200009124 cell division protein 84252 86069 1
CDS - ZP_05401254.1 CdifQCD-2_020200009129 two-component sensor histidine kinase 86247 88949 1
CDS - ZP_05401255.1 CdifQCD-2_020200009134 two-component response regulator 88983 89681 1
CDS - ZP_05401256.1 CdifQCD-2_020200009139 putative cation transport-related, membrane protein 90038 91015 1
CDS - ZP_05401257.1 CdifQCD-2_020200009144 hypothetical protein 91169 91324 1
CDS - ZP_05401258.1 CdifQCD-2_020200009149 3-deoxy-7-phosphoheptulonate synthase 91454 92467 1
CDS aroB ZP_05401259.1 CdifQCD-2_020200009154 3-dehydroquinate synthase 92489 93553 1
CDS - ZP_05401260.1 CdifQCD-2_020200009159 3-phosphoshikimate 1-carboxyvinyltransferase 93553 94866 1
CDS - ZP_05401261.1 CdifQCD-2_020200009164 chorismate synthase 94844 95923 1
CDS - ZP_05401262.1 CdifQCD-2_020200009179 shikimate dehydrogenase 97163 97972 1
CDS - ZP_05401263.1 CdifQCD-2_020200009184 shikimate kinase 97984 98517 1
CDS - ZP_05401264.1 CdifQCD-2_020200009189 putative prephenate dehydrogenase 98538 99377 1
CDS - ZP_05401265.1 CdifQCD-2_020200009194 putative signaling protein 99746 101125 1
CDS - ZP_05401266.1 CdifQCD-2_020200009199 putative signaling protein 101158 104595 1
CDS - ZP_05401267.1 CdifQCD-2_020200009204 hypothetical protein 104612 105358 1
CDS - ZP_05401268.1 CdifQCD-2_020200009209 hypothetical protein 106238 109669 1
CDS - ZP_05401269.1 CdifQCD-2_020200009214 hypothetical protein 110123 110470 1
CDS - ZP_05401270.1 CdifQCD-2_020200009219 ABC transporter substrate-binding protein 110619 111668 -1
CDS - ZP_05401271.1 CdifQCD-2_020200009224 hypothetical protein 112047 112784 1
CDS - ZP_05401272.1 CdifQCD-2_020200009229 putative regulatory protein 112909 113400 -1
CDS - ZP_05401273.1 CdifQCD-2_020200009234 putative plasmid-related protein 113749 114132 1
CDS - ZP_05401274.1 CdifQCD-2_020200009239 hypothetical protein 114638 115021 1