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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05401588.1 CdifQCD-2_020200010889 cyclomaltodextrinase (maltogenic alpha-amylase) 283 2166 -1
CDS - ZP_05401589.1 CdifQCD-2_020200010894 putative phosphoesterase 2424 3245 -1
CDS - ZP_05401590.1 CdifQCD-2_020200010899 hypothetical protein 3435 3788 -1
CDS - ZP_05401591.1 CdifQCD-2_020200010914 putative regulator of a specific sugar metabolism 5933 7144 1
CDS - ZP_05401592.1 CdifQCD-2_020200010919 ferritin 7236 7751 1
CDS - ZP_05401593.1 CdifQCD-2_020200010924 putative acetyl-CoA synthetase 8018 10117 -1
CDS - ZP_05401594.1 CdifQCD-2_020200010929 putative subunit of oxidoreductase 10241 10780 -1
CDS - ZP_05401595.1 CdifQCD-2_020200010934 putative subunit of oxidoreductase 10783 11523 -1
CDS - ZP_05401596.1 CdifQCD-2_020200010939 putative subunit of oxidoreductase 11525 12574 -1
CDS - ZP_05401597.1 CdifQCD-2_020200010944 putative oxidoreductase, ferredoxin subunit 12591 12809 -1
CDS - ZP_05401598.1 CdifQCD-2_020200010949 putative histidinol-phosphate aminotransferase 12842 13945 -1
CDS - ZP_05401599.1 CdifQCD-2_020200010954 lactose permease 14048 15478 -1
CDS - ZP_05401600.1 CdifQCD-2_020200010959 putative sodium/solute symporter 16125 17489 1
CDS - ZP_05401601.1 CdifQCD-2_020200010964 TetR family transcriptional regulator 17513 18166 1
CDS - ZP_05401602.1 CdifQCD-2_020200010969 esterase 18285 19067 -1
CDS - ZP_05401603.1 CdifQCD-2_020200010974 hypothetical protein 19184 20350 -1
CDS - ZP_05401604.1 CdifQCD-2_020200010979 aldehyde dehydrogenase 20489 21853 -1
CDS - ZP_05401605.1 CdifQCD-2_020200010984 putative flavodoxin 22169 22693 -1
CDS - ZP_05401606.1 CdifQCD-2_020200010989 MarR family transcriptional regulator 22742 23239 -1
CDS - ZP_05401607.1 CdifQCD-2_020200010994 putative GTP-binding protein 23472 24743 -1
CDS - ZP_05401608.1 CdifQCD-2_020200010999 ABC transporter, ATP-binding/permease protein 25478 27310 -1
CDS - ZP_05401609.1 CdifQCD-2_020200011004 ABC transporter, ATP-binding/permease protein 27303 29549 -1
CDS - ZP_05401610.1 CdifQCD-2_020200011009 MarR family transcriptional regulator 29617 30078 -1
CDS - ZP_05401611.1 CdifQCD-2_020200011014 putative carbonic anhydrase 30383 30949 -1
CDS - ZP_05401612.1 CdifQCD-2_020200011019 putative regulatory protein 31636 31974 1
CDS - ZP_05401613.1 CdifQCD-2_020200011024 putative regulatory protein 31996 32313 1
CDS - ZP_05401614.1 CdifQCD-2_020200011029 hypothetical protein 32462 33142 1
CDS - ZP_05401615.1 CdifQCD-2_020200011034 3-dehydroquinate dehydratase 33483 34250 -1
CDS - ZP_05401616.1 CdifQCD-2_020200011039 streptogramin A acetyltransferase 35011 35643 1
CDS - ZP_05401617.1 CdifQCD-2_020200011044 radical SAM superfamily lipoprotein 36016 36885 -1
CDS - ZP_05401618.1 CdifQCD-2_020200011049 hypothetical protein 36981 37838 -1
CDS - ZP_05401619.1 CdifQCD-2_020200011054 hypothetical protein 38053 40071 -1
CDS - ZP_05401620.1 CdifQCD-2_020200011059 putative nitrite transporter 40343 41119 -1
CDS - ZP_05401621.1 CdifQCD-2_020200011064 anaerobic sulfite reductase subunit C 41176 42147 -1
CDS - ZP_05401622.1 CdifQCD-2_020200011069 anaerobic sulfite reductase subunit B 42160 42951 -1
CDS - ZP_05401623.1 CdifQCD-2_020200011074 anaerobic sulfite reductase subunit A 42952 43959 -1
CDS - ZP_05401624.1 CdifQCD-2_020200011079 cAMP-binding regulatory protein 44350 44883 -1
CDS - ZP_05401625.1 CdifQCD-2_020200011084 hypothetical protein 44895 45038 -1
CDS - ZP_05401626.1 CdifQCD-2_020200011089 transcriptional regulator 45101 45949 -1
CDS - ZP_05401627.1 CdifQCD-2_020200011094 putative glucokinase 45968 46855 -1
CDS - ZP_05401628.1 CdifQCD-2_020200011099 hypothetical protein 46913 47716 -1
CDS - ZP_05401629.1 CdifQCD-2_020200011104 hypothetical protein 47876 48328 -1
CDS - ZP_05401630.1 CdifQCD-2_020200011109 putative sodium:solute symporter 48458 49960 -1
CDS - ZP_05401631.1 CdifQCD-2_020200011114 N-acetylneuraminate lyase 49993 50874 -1
CDS - ZP_05401632.1 CdifQCD-2_020200011119 N-acetylmannosamine-6-phosphate 2-epimerase 50944 51615 -1
CDS - ZP_05401633.1 CdifQCD-2_020200011124 hypothetical protein 51891 52382 -1
CDS - ZP_05401634.1 CdifQCD-2_020200011129 hypothetical protein 52404 53768 -1
CDS - ZP_05401635.1 CdifQCD-2_020200011134 putative signaling protein 54187 55362 1
CDS asnC ZP_05401636.1 CdifQCD-2_020200011139 asparaginyl-tRNA synthetase 55535 56050 -1
CDS asnC ZP_05401637.1 CdifQCD-2_020200011144 asparaginyl-tRNA synthetase 56070 56933 -1
CDS - ZP_05401638.1 CdifQCD-2_020200011149 hypothetical protein 57401 57595 -1
CDS - ZP_05401639.1 CdifQCD-2_020200011154 putative germination-specific protease 57847 59520 -1
CDS - ZP_05401640.1 CdifQCD-2_020200011159 putative germination-specific protease 59530 62928 -1
CDS - ZP_05401641.1 CdifQCD-2_020200011164 hypothetical protein 63094 64290 -1
CDS - ZP_05401642.1 CdifQCD-2_020200011169 putative ATPase 64311 65132 -1
CDS - ZP_05401643.1 CdifQCD-2_020200011174 hypothetical protein 65592 66686 1
CDS - ZP_05401644.1 CdifQCD-2_020200011179 hypothetical protein 66837 67193 1
CDS - ZP_05401645.1 CdifQCD-2_020200011184 L-lysine 2,3-aminomutase 67286 68554 -1
CDS - ZP_05401646.1 CdifQCD-2_020200011204 GntR family transcriptioanl regulator 69663 69839 -1
CDS - ZP_05401647.1 CdifQCD-2_020200011209 putative amino acid recemase 70066 70368 1
CDS - ZP_05401648.1 CdifQCD-2_020200011214 hypothetical protein 70516 72051 -1
CDS - ZP_05401649.1 CdifQCD-2_020200011219 putative PTS system, EIIC component 72326 73375 1
CDS - ZP_05401650.1 CdifQCD-2_020200011224 hypothetical protein 73424 74458 -1
CDS - ZP_05401651.1 CdifQCD-2_020200011229 hypothetical protein 74476 74823 -1
CDS - ZP_05401652.1 CdifQCD-2_020200011244 peptidase 76546 78339 -1
CDS - ZP_05401653.1 CdifQCD-2_020200011249 proton-dependent oligopeptide transporter 78592 79983 -1
CDS - ZP_05401654.1 CdifQCD-2_020200011254 putative protein export chaperone 80441 80863 -1
CDS - ZP_05401655.1 CdifQCD-2_020200011259 putative protein export chaperone 80823 81584 -1
CDS - ZP_05401656.1 CdifQCD-2_020200011264 hypothetical protein 81695 82738 -1
CDS - ZP_05401657.1 CdifQCD-2_020200011269 hypothetical protein 83260 83817 -1
CDS - ZP_05401658.1 CdifQCD-2_020200011274 putative oxidoreductase 83845 85371 -1
CDS - ZP_05401659.1 CdifQCD-2_020200011279 CAAX amino terminal protease family protein 85750 86712 -1
CDS - ZP_05401660.1 CdifQCD-2_020200011284 PTS system, IIBC component 87254 89173 -1
CDS - ZP_05401661.1 CdifQCD-2_020200011289 putative 1-phosphofructokinase 89210 90127 -1
CDS - ZP_05401662.1 CdifQCD-2_020200011294 putative transcriptional antiterminator 90294 92072 -1
CDS - ZP_05401663.1 CdifQCD-2_020200011299 hypothetical protein 92084 92824 -1
CDS - ZP_05401664.1 CdifQCD-2_020200011304 hypothetical protein 93098 94159 1
CDS - ZP_05401665.1 CdifQCD-2_020200011309 hypothetical protein 94314 95567 -1
CDS - ZP_05401666.1 CdifQCD-2_020200011314 DNA topoisomerase III 95753 97789 -1
CDS - ZP_05401667.1 CdifQCD-2_020200011319 putative sodium:solute symporter 98494 99861 1
CDS - ZP_05401668.1 CdifQCD-2_020200011324 sugar phosphate aldolase 100034 100681 -1
CDS araD ZP_05401669.1 CdifQCD-2_020200011329 L-ribulose-5-phosphate 4-epimerase 100699 101385 -1
CDS - ZP_05401670.1 CdifQCD-2_020200011334 putative sugar dehydrogenase 101482 102540 -1
CDS - ZP_05401671.1 CdifQCD-2_020200011339 PTS system, IIC component 102885 104291 -1
CDS - ZP_05401672.1 CdifQCD-2_020200011344 PTS system, IIB component 104469 104771 -1
CDS - ZP_05401673.1 CdifQCD-2_020200011349 PTS system, IIBC component 104892 105338 -1
CDS - ZP_05401674.1 CdifQCD-2_020200011354 putative sigma-54 interacting transcription antiterminator 105371 108274 -1
CDS - ZP_05401675.1 CdifQCD-2_020200011359 hypothetical protein 108751 109173 1
CDS - ZP_05401676.1 CdifQCD-2_020200011364 putative beta-lactamase repressor 109676 110044 1
CDS - ZP_05401677.1 CdifQCD-2_020200011369 hypothetical protein 110057 111295 1
CDS - ZP_05401678.1 CdifQCD-2_020200011384 hypothetical protein 113063 113764 1
CDS - ZP_05401679.1 CdifQCD-2_020200011389 hypothetical protein 113757 114080 1
CDS - ZP_05401680.1 CdifQCD-2_020200011394 two-component sensor histidine kinase 114273 116345 -1
CDS - ZP_05401681.1 CdifQCD-2_020200011399 hypothetical protein 116360 116566 -1
CDS - ZP_05401682.1 CdifQCD-2_020200011404 two-component system response regulator 116541 117233 -1
CDS - ZP_05401683.1 CdifQCD-2_020200011409 hypothetical protein 117819 117917 -1
CDS - ZP_05401684.1 CdifQCD-2_020200011414 putative transcriptional regulator 118098 118331 1
CDS - ZP_05401685.1 CdifQCD-2_020200011419 hypothetical protein 118315 118728 1
CDS - ZP_05401686.1 CdifQCD-2_020200011424 hypothetical protein 118747 118947 1
CDS - ZP_05401687.1 CdifQCD-2_020200011429 hypothetical protein 119325 119642 1