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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05401774.1 CdifQCD-2_020200011874 hypothetical protein 708 1187 -1
CDS - ZP_05401775.1 CdifQCD-2_020200011879 hypothetical protein 1482 2186 -1
CDS - ZP_05401776.1 CdifQCD-2_020200011884 putative transglycosylase 2542 3213 -1
CDS - ZP_05401777.1 CdifQCD-2_020200011889 putative transglycosylase 3266 3559 -1
CDS - ZP_05401778.1 CdifQCD-2_020200011894 putative DNA polymerase III, epsilon chain 3687 4193 -1
CDS - ZP_05401779.1 CdifQCD-2_020200011899 hypothetical protein 4352 5020 -1
CDS - ZP_05401780.1 CdifQCD-2_020200011904 hypothetical protein 5432 5938 -1
CDS - ZP_05401781.1 CdifQCD-2_020200011909 putative exonuclease 6302 7330 -1
CDS - ZP_05401782.1 CdifQCD-2_020200011914 hypothetical protein 7378 8238 -1
CDS - ZP_05401783.1 CdifQCD-2_020200011919 hypothetical protein 8507 8716 1
CDS - ZP_05401784.1 CdifQCD-2_020200011924 putative spore-coat protein 8716 8982 1
CDS - ZP_05401785.1 CdifQCD-2_020200011929 putative spore-coat protein 9011 9583 1
CDS - ZP_05401786.1 CdifQCD-2_020200011934 hypothetical protein 9712 9840 -1
CDS - ZP_05401787.1 CdifQCD-2_020200011939 putative cell wall hydrolase 9821 11011 -1
CDS - ZP_05401788.1 CdifQCD-2_020200011944 deoxyuridine 5'-triphosphate nucleotidohydrolase 11271 11702 -1
CDS - ZP_05401789.1 CdifQCD-2_020200011949 putative DNA topoisomerase 11815 12219 1
CDS - ZP_05401790.1 CdifQCD-2_020200011954 putative DNA topoisomerase 12176 14044 1
CDS - ZP_05401791.1 CdifQCD-2_020200011959 MarR family transcriptional regulator 14155 14640 -1
CDS - ZP_05401792.1 CdifQCD-2_020200011964 putative lipoprotein 14892 16115 1
CDS - ZP_05401793.1 CdifQCD-2_020200011969 putative multidrug efflux pump, membrane protein 16119 19253 1
CDS - ZP_05401794.1 CdifQCD-2_020200011974 putative multidrug efflux pump, outer membrane protein 19275 20585 1
CDS - ZP_05401795.1 CdifQCD-2_020200011979 hypothetical protein 20875 21120 -1
CDS - ZP_05401796.1 CdifQCD-2_020200011984 pyruvate phosphate dikinase 21334 23961 -1
CDS - ZP_05401797.1 CdifQCD-2_020200011989 hypothetical protein 24022 24858 -1
CDS - ZP_05401798.1 CdifQCD-2_020200011994 hypothetical protein 24871 25509 -1
CDS - ZP_05401799.1 CdifQCD-2_020200011999 hypothetical protein 25945 27237 -1
CDS - ZP_05401800.1 CdifQCD-2_020200012004 PTS system, IIA component 27274 27630 -1
CDS - ZP_05401801.1 CdifQCD-2_020200012009 hypothetical protein 27665 28024 -1
CDS - ZP_05401802.1 CdifQCD-2_020200012014 putative transcription antiterminator 28094 30067 -1
CDS - ZP_05401803.1 CdifQCD-2_020200012019 PTS system, glucitol/sorbitol-specific IIBC component 30289 31302 -1
CDS - ZP_05401804.1 CdifQCD-2_020200012024 PTS system, glucitol/sorbitol-specific IIc2 component 31315 31860 -1
CDS - ZP_05401805.1 CdifQCD-2_020200012029 AraC family transcription regulator 32235 33104 -1
CDS - ZP_05401806.1 CdifQCD-2_020200012034 hypothetical protein 33255 34373 -1
CDS - ZP_05401807.1 CdifQCD-2_020200012039 C4-dicarboxylate anaerobic carrier 34585 36003 -1
CDS - ZP_05401808.1 CdifQCD-2_020200012044 putative peptidase 36028 37164 -1
CDS - ZP_05401809.1 CdifQCD-2_020200012049 sodium/proton-dependent alanine carrier protein 37220 38683 -1
CDS - ZP_05401810.1 CdifQCD-2_020200012054 transporter 39328 40587 -1
CDS - ZP_05401811.1 CdifQCD-2_020200012059 putative aminotransferase 40611 41819 -1
CDS - ZP_05401812.1 CdifQCD-2_020200012064 phosphate butyryltransferase 41849 42742 -1
CDS - ZP_05401813.1 CdifQCD-2_020200012069 butyrate kinase 42760 43818 -1
CDS - ZP_05401814.1 CdifQCD-2_020200012074 putative oxidoreductase subunit 43975 44514 -1
CDS - ZP_05401815.1 CdifQCD-2_020200012079 putative oxidoreductase subunit 44527 45246 -1
CDS - ZP_05401816.1 CdifQCD-2_020200012084 putative oxidoreductase subunit 45249 46325 -1
CDS - ZP_05401817.1 CdifQCD-2_020200012089 putative oxidoreductase ferredoxin subunit 46354 46551 -1
CDS - ZP_05401818.1 CdifQCD-2_020200012094 IclR family transcriptional regulator 46836 47603 -1
CDS - ZP_05401819.1 CdifQCD-2_020200012099 putative nitrite/sulphite reductase 47883 49430 1
CDS - ZP_05401820.1 CdifQCD-2_020200012104 glycyl-tRNA synthetase beta chain 49597 51663 -1
CDS glyQ ZP_05401821.1 CdifQCD-2_020200012109 glycyl-tRNA synthetase subunit alpha 51663 52541 -1
CDS - ZP_05401822.1 CdifQCD-2_020200012114 hypothetical protein 52701 53300 -1
CDS - ZP_05401823.1 CdifQCD-2_020200012119 DNA repair protein 53293 54066 -1
CDS - ZP_05401824.1 CdifQCD-2_020200012124 hypothetical protein 54032 54187 -1
CDS - ZP_05401825.1 CdifQCD-2_020200012129 putative Mg2+ transporter 54260 55639 -1
CDS - ZP_05401826.1 CdifQCD-2_020200012134 GTP-binding protein Era 55651 56544 -1
CDS - ZP_05401827.1 CdifQCD-2_020200012139 cytidine deaminase 56609 57010 -1
CDS - ZP_05401828.1 CdifQCD-2_020200012144 putative membrane-associated kinase and phosphatase 57129 57848 -1
CDS - ZP_05401829.1 CdifQCD-2_020200012149 hypothetical protein 57854 58315 -1
CDS - ZP_05401830.1 CdifQCD-2_020200012154 PhoH-like protein 58372 59469 -1
CDS - ZP_05401831.1 CdifQCD-2_020200012159 putative stage IV sporulation protein 59426 60751 -1
CDS - ZP_05401832.1 CdifQCD-2_020200012164 hypothetical protein 60764 61000 -1
CDS - ZP_05401833.1 CdifQCD-2_020200012169 putative sigma 54 modulation protein 61214 61771 -1
CDS - ZP_05401834.1 CdifQCD-2_020200012174 probale sensory protein 61964 62461 -1
CDS - ZP_05401835.1 CdifQCD-2_020200012179 putative tRNA binding protein 62572 63015 -1
CDS - ZP_05401836.1 CdifQCD-2_020200012184 30S ribosomal protein S21 63045 63224 -1
CDS - ZP_05401837.1 CdifQCD-2_020200012189 histidine triad nucleotide-binding protein 63387 63737 -1
CDS - ZP_05401838.1 CdifQCD-2_020200012194 putative radical SAM superfamily protein 63780 65078 -1
CDS - ZP_05401839.1 CdifQCD-2_020200012199 hypothetical protein 65080 65838 -1
CDS prmA ZP_05401840.1 CdifQCD-2_020200012204 ribosomal protein L11 methyltransferase 65857 66804 -1
CDS - ZP_05401841.1 CdifQCD-2_020200012209 ATP-dependent helicase 67243 69297 -1
CDS - ZP_05401842.1 CdifQCD-2_020200012214 ATP-dependent helicase 69275 69652 -1
CDS - ZP_05401843.1 CdifQCD-2_020200012219 hypothetical protein 69679 70476 -1
CDS - ZP_05401844.1 CdifQCD-2_020200012224 hypothetical protein 70492 71505 -1
CDS - ZP_05401845.1 CdifQCD-2_020200012229 hypothetical protein 71524 72990 -1
CDS - ZP_05401846.1 CdifQCD-2_020200012234 hypothetical protein 72995 73732 -1
CDS - ZP_05401847.1 CdifQCD-2_020200012239 hypothetical protein 73833 74009 -1
CDS - ZP_05401848.1 CdifQCD-2_020200012244 ABC transporter, ATP-binding protein 74462 75571 1
CDS - ZP_05401849.1 CdifQCD-2_020200012249 hypothetical protein 75601 76368 1
CDS - ZP_05401850.1 CdifQCD-2_020200012254 transporter 76556 77929 -1
CDS - ZP_05401851.1 CdifQCD-2_020200012259 glucokinase 77962 78897 -1
CDS - ZP_05401852.1 CdifQCD-2_020200012264 hypothetical protein 79544 79660 -1
CDS - ZP_05401853.1 CdifQCD-2_020200012269 chaperone protein 79872 81026 -1
CDS dnaK ZP_05401854.1 CdifQCD-2_020200012274 molecular chaperone DnaK 81237 83084 -1
CDS - ZP_05401855.1 CdifQCD-2_020200012279 heat shock protein 83176 83796 -1
CDS - ZP_05401856.1 CdifQCD-2_020200012284 heat-inducible transcription repressor 83826 84845 -1
CDS - ZP_05401857.1 CdifQCD-2_020200012289 oxygen-independent coproporphyrinogen III oxidase 84948 86123 -1
CDS - ZP_05401858.1 CdifQCD-2_020200012294 amino acid transporter 86295 87608 -1
CDS - ZP_05401859.1 CdifQCD-2_020200012299 putative poly(A) polymerase 87840 89177 -1
CDS - ZP_05401860.1 CdifQCD-2_020200012304 GTP-binding protein LepA 89326 91131 -1
CDS - ZP_05401861.1 CdifQCD-2_020200012309 hypothetical protein 91413 91664 -1
CDS - ZP_05401862.1 CdifQCD-2_020200012314 putative stage II sporulation protein P 91695 92714 -1
CDS - ZP_05401863.1 CdifQCD-2_020200012319 germination protease 92732 93685 -1
CDS - ZP_05401864.1 CdifQCD-2_020200012324 hypothetical protein 94027 94656 -1
CDS rpsT ZP_05401865.1 CdifQCD-2_020200012329 30S ribosomal protein S20 94978 95244 1
CDS - ZP_05401866.1 CdifQCD-2_020200012334 hypothetical protein 95434 96477 -1
CDS - ZP_05401867.1 CdifQCD-2_020200012339 putative competence membrane protein 96431 97732 -1
CDS - ZP_05401868.1 CdifQCD-2_020200012344 hypothetical protein 97878 99032 -1
CDS - ZP_05401869.1 CdifQCD-2_020200012349 hypothetical protein 99041 99946 -1
CDS - ZP_05401870.1 CdifQCD-2_020200012354 metallo beta-lactamase superfamily lipoprotein 100133 100969 1
CDS - ZP_05401871.1 CdifQCD-2_020200012359 hypothetical protein 101111 101818 -1
CDS - ZP_05401872.1 CdifQCD-2_020200012364 hypothetical protein 102307 103146 -1
CDS - ZP_05401873.1 CdifQCD-2_020200012369 uracil-DNA glycosylase 103394 104068 -1