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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05401940.1 CdifQCD-2_020200012724 hypothetical protein 1 164 -1
CDS - ZP_05401941.1 CdifQCD-2_020200012729 putative sugar transporter, permease protein 221 1030 -1
CDS - ZP_05401942.1 CdifQCD-2_020200012734 putative sugar transporter, permease protein 1046 1963 -1
CDS - ZP_05401943.1 CdifQCD-2_020200012739 putative sugar transporter, substrate-binding lipoprotein 2061 3338 -1
CDS - ZP_05401944.1 CdifQCD-2_020200012744 hypothetical protein 3782 4306 -1
CDS - ZP_05401945.1 CdifQCD-2_020200012749 phosphopantetheine adenylyltransferase 4310 4807 -1
CDS - ZP_05401946.1 CdifQCD-2_020200012754 hypothetical protein 4809 5363 -1
CDS - ZP_05401947.1 CdifQCD-2_020200012759 ATP-dependent DNA helicase RecG 5422 7479 -1
CDS - ZP_05401948.1 CdifQCD-2_020200012764 putative phosphatase 7560 9203 -1
CDS - ZP_05401949.1 CdifQCD-2_020200012769 hypothetical protein 9222 9572 -1
CDS - ZP_05401950.1 CdifQCD-2_020200012774 50S ribosomal protein L28 9933 10121 1
CDS - ZP_05401951.1 CdifQCD-2_020200012779 hypothetical protein 10281 10433 -1
CDS - ZP_05401952.1 CdifQCD-2_020200012784 hypothetical protein 10531 11007 -1
CDS - ZP_05401953.1 CdifQCD-2_020200012789 MerR family transcriptional regulator 11226 11987 1
CDS - ZP_05401954.1 CdifQCD-2_020200012794 putative transcriptional antiterminator 12246 14174 -1
CDS - ZP_05401955.1 CdifQCD-2_020200012799 PTS system, IIA component 14409 14861 1
CDS - ZP_05401956.1 CdifQCD-2_020200012804 PTS system, IIB component 14864 15172 1
CDS - ZP_05401957.1 CdifQCD-2_020200012819 alpha-mannosidase 16469 19147 1
CDS - ZP_05401958.1 CdifQCD-2_020200012824 two-component sensor histidine kinase 19426 21759 -1
CDS - ZP_05401959.1 CdifQCD-2_020200012829 two-component response regulator 21728 22450 -1
CDS - ZP_05401960.1 CdifQCD-2_020200012834 putative nitroreductase 22845 23501 -1
CDS - ZP_05401961.1 CdifQCD-2_020200012839 hydrolase 23556 24185 -1
CDS - ZP_05401962.1 CdifQCD-2_020200012844 putative thiamine pyrophosphokinase 24316 24957 -1
CDS - ZP_05401963.1 CdifQCD-2_020200012849 ribulose-phosphate 3-epimerase 24966 25637 -1
CDS - ZP_05401964.1 CdifQCD-2_020200012854 putative ATP/GTP-binding protein 25642 26526 -1
CDS - ZP_05401965.1 CdifQCD-2_020200012859 short chain dehydrogenase 26624 27361 -1
CDS - ZP_05401966.1 CdifQCD-2_020200012864 serine/threonine-protein kinase and phosphatase 27469 29472 -1
CDS - ZP_05401967.1 CdifQCD-2_020200012869 serine/threonine phosphatase 29489 30241 -1
CDS - ZP_05401968.1 CdifQCD-2_020200012874 radical SAM protein 30261 31292 -1
CDS - ZP_05401969.1 CdifQCD-2_020200012879 ribosomal RNA small subunit methyltransferase 31300 32625 -1
CDS - ZP_05401970.1 CdifQCD-2_020200012884 putative membrane-associated neutral zinc metallopeptidase 32687 33388 -1
CDS - ZP_05401971.1 CdifQCD-2_020200012889 hypothetical protein 33457 34209 -1
CDS - ZP_05401972.1 CdifQCD-2_020200012894 methionyl-tRNA formyltransferase 34219 35148 -1
CDS - ZP_05401973.1 CdifQCD-2_020200012899 peptide deformylase 2 35163 35603 -1
CDS - ZP_05401974.1 CdifQCD-2_020200012904 putative primosomal protein N' 35621 38110 -1
CDS - ZP_05401975.1 CdifQCD-2_020200012909 coenzyme A biosynthesis bifunctional protein 38385 39584 -1
CDS - ZP_05401976.1 CdifQCD-2_020200012914 DNA-directed RNA polymerase omega chain 39589 39855 -1
CDS gmk ZP_05401977.1 CdifQCD-2_020200012919 guanylate kinase 39858 40475 -1
CDS - ZP_05401978.1 CdifQCD-2_020200012924 hypothetical protein 40505 41386 -1
CDS - ZP_05401979.1 CdifQCD-2_020200012929 diaminopimelate epimerase 41390 42220 -1
CDS - ZP_05401980.1 CdifQCD-2_020200012934 low-specificity L-threonine aldolase 42507 43541 -1
CDS - ZP_05401981.1 CdifQCD-2_020200012939 fibronectin-binding protein 43837 45612 1
CDS - ZP_05401982.1 CdifQCD-2_020200012944 putative antibiotic resistance ABC transporter,ATP-binding protein 45805 47457 -1
CDS - ZP_05401983.1 CdifQCD-2_020200012949 uracil permease 47745 48953 -1
CDS - ZP_05401984.1 CdifQCD-2_020200012954 PyrR bifunctional protein 49236 49769 -1
CDS - ZP_05401985.1 CdifQCD-2_020200012959 putative pseudouridylate synthase 50128 51075 -1
CDS - ZP_05401986.1 CdifQCD-2_020200012964 lipoprotein signal peptidase 51044 51490 -1
CDS - ZP_05401987.1 CdifQCD-2_020200012969 putative oligosaccharide deacetylase 51649 52428 -1
CDS - ZP_05401988.1 CdifQCD-2_020200012974 putative general stress protein 52477 52959 -1
CDS - ZP_05401989.1 CdifQCD-2_020200012979 putative carbon starvation 53225 54646 -1
CDS - ZP_05401990.1 CdifQCD-2_020200012984 two-component response regulator 54792 55562 -1
CDS - ZP_05401991.1 CdifQCD-2_020200012989 two-component sensor histidine kinase 55567 56769 -1
CDS - ZP_05401992.1 CdifQCD-2_020200012994 putative response regulator 57650 58396 1
CDS - ZP_05401993.1 CdifQCD-2_020200012999 C2 toxin,component I 58786 60177 1
CDS - ZP_05401994.1 CdifQCD-2_020200013004 C2 toxin,component II 60230 62860 1
CDS - ZP_05401995.1 CdifQCD-2_020200013009 tryptophanyl-tRNA synthetase 63511 64512 -1
CDS - ZP_05401996.1 CdifQCD-2_020200013014 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 64535 65233 -1
CDS - ZP_05401997.1 CdifQCD-2_020200013019 putative amino acid permease 65607 67010 -1
CDS - ZP_05401998.1 CdifQCD-2_020200013024 peptidase 67507 68583 1
CDS - ZP_05401999.1 CdifQCD-2_020200013029 hypothetical protein 68686 69528 -1
CDS - ZP_05402000.1 CdifQCD-2_020200013034 TetR family transcriptional regulator 69712 70284 1
CDS - ZP_05402001.1 CdifQCD-2_020200013039 hypothetical protein 70447 70719 -1
CDS - ZP_05402002.1 CdifQCD-2_020200013044 hypothetical protein 70833 71705 -1
CDS ileS ZP_05402003.1 CdifQCD-2_020200013049 isoleucyl-tRNA synthetase 71992 75099 -1
CDS - ZP_05402004.1 CdifQCD-2_020200013054 cell-division initiation protein 75598 76125 -1
CDS - ZP_05402005.1 CdifQCD-2_020200013059 putative RNA-binding cell division protein 76160 76945 -1
CDS - ZP_05402006.1 CdifQCD-2_020200013064 hypothetical protein 76955 77212 -1
CDS - ZP_05402007.1 CdifQCD-2_020200013069 hypothetical protein 77231 77689 -1
CDS - ZP_05402008.1 CdifQCD-2_020200013074 putative alanine racemase 77728 78432 -1
CDS - ZP_05402009.1 CdifQCD-2_020200013079 hypothetical protein 78442 79077 -1
CDS - ZP_05402010.1 CdifQCD-2_020200013084 hypothetical protein 79457 80497 1
CDS - ZP_05402011.1 CdifQCD-2_020200013089 hypothetical protein 80953 82308 -1
CDS - ZP_05402012.1 CdifQCD-2_020200013094 hypothetical protein 82334 82603 -1
CDS - ZP_05402013.1 CdifQCD-2_020200013099 hypothetical protein 82893 84854 -1
CDS - ZP_05402014.1 CdifQCD-2_020200013104 stage IV sporulation protein A 85037 86512 -1
CDS - ZP_05402015.1 CdifQCD-2_020200013109 hypothetical protein 86602 86778 -1
CDS - ZP_05402016.1 CdifQCD-2_020200013114 hypothetical protein 86791 86973 -1
CDS - ZP_05402017.1 CdifQCD-2_020200013119 hypothetical protein 86983 87255 1
CDS - ZP_05402018.1 CdifQCD-2_020200013124 glycerol-3-phosphate dehydrogenase (NAD(P)+) 87411 88430 -1
CDS - ZP_05402019.1 CdifQCD-2_020200013129 hypothetical protein 88461 89075 -1
CDS engA ZP_05402020.1 CdifQCD-2_020200013134 GTP-binding protein EngA 89109 90434 -1
CDS - ZP_05402021.1 CdifQCD-2_020200013139 hypothetical protein 90462 91790 -1
CDS - ZP_05402022.1 CdifQCD-2_020200013144 hypothetical protein 92026 92226 -1
CDS - ZP_05402023.1 CdifQCD-2_020200013159 two-component sensor histidine kinase 93205 95481 -1
CDS - ZP_05402024.1 CdifQCD-2_020200013164 two-component response regulator 95510 96202 -1
CDS - ZP_05402025.1 CdifQCD-2_020200013169 hypothetical protein 96217 96975 -1
CDS - ZP_05402026.1 CdifQCD-2_020200013174 putative ATP-binding protein 96975 97436 -1
CDS - ZP_05402027.1 CdifQCD-2_020200013179 hypothetical protein 97458 97721 -1
CDS - ZP_05402028.1 CdifQCD-2_020200013184 sporulation sigma factor SigG 97825 98598 -1
CDS - ZP_05402029.1 CdifQCD-2_020200013189 sporulation sigma factor SigE 98690 99412 -1
CDS - ZP_05402030.1 CdifQCD-2_020200013194 sporulation sigma-E factor processing peptidase 99437 100282 -1
CDS - ZP_05402031.1 CdifQCD-2_020200013199 putative extracellular solute-binding protein 100608 101711 -1
CDS - ZP_05402032.1 CdifQCD-2_020200013204 putative extracellular solute-binding protein 101686 101883 -1
CDS - ZP_05402033.1 CdifQCD-2_020200013209 cell division protein 102168 103325 -1
CDS - ZP_05402034.1 CdifQCD-2_020200013214 hypothetical protein 103515 103868 -1
CDS - ZP_05402035.1 CdifQCD-2_020200013219 hypothetical protein 103969 104643 -1
CDS - ZP_05402036.1 CdifQCD-2_020200013224 hypothetical protein 104648 105346 -1
CDS - ZP_05402037.1 CdifQCD-2_020200013229 putative cell division protein 105369 106109 -1
CDS - ZP_05402038.1 CdifQCD-2_020200013234 UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine 106370 107596 -1
CDS - ZP_05402039.1 CdifQCD-2_020200013239 cell division/stage V sporulation protein 107614 108744 -1