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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05402128.1 CdifQCD-2_020200013711 putative sigma-54-interacting regulatory protein 1 1476 1
CDS - ZP_05402129.1 CdifQCD-2_020200013716 putative aminotransferase 1701 2867 1
CDS - ZP_05402130.1 CdifQCD-2_020200013721 putative malate-2H(+)/Na(+)-lactate antiporter 2892 4334 1
CDS - ZP_05402131.1 CdifQCD-2_020200013726 hypothetical protein 4337 4606 1
CDS - ZP_05402132.1 CdifQCD-2_020200013741 LysR family transcriptional regulator 6482 7351 1
CDS - ZP_05402133.1 CdifQCD-2_020200013746 putative carbon-nitrogen hydrolase 7463 8269 -1
CDS - ZP_05402134.1 CdifQCD-2_020200013751 putative cytosine permease 8283 9515 -1
CDS - ZP_05402135.1 CdifQCD-2_020200013756 putative aspartyl-tRNA synthetase 9973 11760 -1
CDS - ZP_05402136.1 CdifQCD-2_020200013761 putative histidyl-tRNA synthetase 11834 13096 -1
CDS - ZP_05402137.1 CdifQCD-2_020200013766 coproporphyrinogen III oxidase 13086 14642 -1
CDS - ZP_05402138.1 CdifQCD-2_020200013781 putative D-tyrosyl-tRNA protein 15363 15812 -1
CDS - ZP_05402139.1 CdifQCD-2_020200013796 adenine phosphoribosyltransferase 18119 18631 -1
CDS - ZP_05402140.1 CdifQCD-2_020200013801 putative single-stranded-DNA-specific exonuclease 18644 21094 -1
CDS - ZP_05402141.1 CdifQCD-2_020200013806 ubiquinone biosynthesis protein 21107 22771 -1
CDS - ZP_05402142.1 CdifQCD-2_020200013811 putative transferase 23069 23566 -1
CDS - ZP_05402143.1 CdifQCD-2_020200013816 putative radical SAM family protein 23595 24974 -1
CDS - ZP_05402144.1 CdifQCD-2_020200013821 autoinducer prepeptide 25274 25420 -1
CDS - ZP_05402145.1 CdifQCD-2_020200013826 accessory gene regulator 25450 26028 -1
CDS - ZP_05402146.1 CdifQCD-2_020200013831 hypothetical protein 26396 27826 -1
CDS - ZP_05402147.1 CdifQCD-2_020200013836 hypothetical protein 28171 28836 1
CDS - ZP_05402148.1 CdifQCD-2_020200013841 phosphoenolpyruvate-protein phosphotransferase 29627 31339 -1
CDS - ZP_05402149.1 CdifQCD-2_020200013846 PTS system, phosphocarrier protein 31691 31951 -1
CDS - ZP_05402150.1 CdifQCD-2_020200013851 putative phospholipase 32143 33354 -1
CDS - ZP_05402151.1 CdifQCD-2_020200013856 putative DNA modification methylase 33586 35319 -1
CDS - ZP_05402152.1 CdifQCD-2_020200013861 hypothetical protein 35359 35757 -1
CDS - ZP_05402153.1 CdifQCD-2_020200013866 putative signaling protein 35760 37307 -1
CDS - ZP_05402154.1 CdifQCD-2_020200013871 putative N-acetylmuramoyl-L-alanine amidase 37619 38524 -1
CDS - ZP_05402155.1 CdifQCD-2_020200013876 undecaprenyl pyrophosphate synthetase 38567 39211 -1
CDS - ZP_05402156.1 CdifQCD-2_020200013881 putative lipoprotein 39350 39820 1
CDS - ZP_05402157.1 CdifQCD-2_020200013896 putative penicillin-binding protein repressor 41109 42065 1
CDS - ZP_05402158.1 CdifQCD-2_020200013901 putative penicillin-binding protein repressor 42350 43315 1
CDS - ZP_05402159.1 CdifQCD-2_020200013906 cell surface protein 43513 45096 -1
CDS - ZP_05402160.1 CdifQCD-2_020200013911 cell surface protein 45152 45625 -1
CDS - ZP_05402161.1 CdifQCD-2_020200013916 putative cell-wall hydrolase 45926 46633 -1
CDS - ZP_05402162.1 CdifQCD-2_020200013921 capsular polysaccharide biosynthesis protein 46821 48734 -1
CDS - ZP_05402163.1 CdifQCD-2_020200013926 putative capsular polysaccharide biosynthesis glycosyl transferase 48817 49908 -1
CDS - ZP_05402164.1 CdifQCD-2_020200013931 putative UDP-glucose 6-dehydrogenase 49914 51281 -1
CDS - ZP_05402165.1 CdifQCD-2_020200013936 putative teichuronic acid biosynthesis glycosyl transferase 51235 51987 -1
CDS - ZP_05402166.1 CdifQCD-2_020200013941 putative beta-glycosyltransferase 52035 52943 -1
CDS - ZP_05402167.1 CdifQCD-2_020200013946 putative teichuronic acid biosynthesis glycosyl transferase 52965 53714 -1
CDS - ZP_05402168.1 CdifQCD-2_020200013951 putative minor teichoic acid biosynthesis protein 53743 54498 -1
CDS - ZP_05402169.1 CdifQCD-2_020200013956 putative minor teichoic acid biosynthesis protein 54557 54919 -1
CDS - ZP_05402170.1 CdifQCD-2_020200013961 putative glycosyl transferase 54934 55773 -1
CDS - ZP_05402171.1 CdifQCD-2_020200013966 putative polysaccharide polymerase 55776 56933 -1
CDS - ZP_05402172.1 CdifQCD-2_020200013971 putative polysaccharide biosynthesis protein 56949 57671 -1
CDS - ZP_05402173.1 CdifQCD-2_020200013976 putative mannose-1-phosphate guanylyltransferase 57683 58756 -1
CDS - ZP_05402174.1 CdifQCD-2_020200013981 putative phosphomannomutase/phosphoglycerate mutase 58778 60484 -1
CDS - ZP_05402175.1 CdifQCD-2_020200013986 putative transmembrane virulence factor MviN family protein 60530 62086 -1
CDS - ZP_05402176.1 CdifQCD-2_020200013991 cell surface protein 62202 63257 -1
CDS - ZP_05402177.1 CdifQCD-2_020200013996 putative glycosyltransferase 63352 64038 -1
CDS - ZP_05402178.1 CdifQCD-2_020200014001 cell surface protein 64258 66282 -1
CDS - ZP_05402179.1 CdifQCD-2_020200014006 hypothetical protein 66536 67981 -1
CDS - ZP_05402180.1 CdifQCD-2_020200014011 cell surface protein 68113 69690 -1
CDS - ZP_05402181.1 CdifQCD-2_020200014016 cell surface protein (putative cell surface-associated cysteine protease) 69994 72405 -1
CDS - ZP_05402182.1 CdifQCD-2_020200014021 putative cell wall teichoic acid glycosylation protein 72632 73027 1
CDS - ZP_05402183.1 CdifQCD-2_020200014026 cell surface protein 73065 75209 -1
CDS - ZP_05402184.1 CdifQCD-2_020200014031 hypothetical protein 75242 75949 -1
CDS - ZP_05402185.1 CdifQCD-2_020200014036 cell surface protein (putative S-layer protein precursor) 76056 77927 -1
CDS - ZP_05402186.1 CdifQCD-2_020200014041 preprotein translocase SecA subunit 78341 80686 -1
CDS - ZP_05402187.1 CdifQCD-2_020200014046 cell surface protein (S-layer precursor protein) 80951 83077 -1
CDS - ZP_05402188.1 CdifQCD-2_020200014051 surface surface protein 83289 84878 -1
CDS - ZP_05402189.1 CdifQCD-2_020200014066 cell surface protein 87210 88613 -1
CDS - ZP_05402190.1 CdifQCD-2_020200014071 cell surface protein 89076 90971 -1
CDS - ZP_05402191.1 CdifQCD-2_020200014076 hypothetical protein 91407 91526 -1
CDS - ZP_05402192.1 CdifQCD-2_020200014081 hypothetical protein 91609 91752 -1
CDS - ZP_05402193.1 CdifQCD-2_020200014086 hypothetical protein 91818 92180 -1
CDS - ZP_05402194.1 CdifQCD-2_020200014091 putative protein translocase subunit 92238 92531 -1
CDS - ZP_05402195.1 CdifQCD-2_020200014096 queuine tRNA-ribosyltransferase 92665 93786 -1
CDS - ZP_05402196.1 CdifQCD-2_020200014101 hypothetical protein 93865 94350 -1
CDS queA ZP_05402197.1 CdifQCD-2_020200014106 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 94362 95387 -1
CDS ruvB ZP_05402198.1 CdifQCD-2_020200014111 Holliday junction DNA helicase RuvB 95705 96724 -1
CDS ruvA ZP_05402199.1 CdifQCD-2_020200014116 Holliday junction DNA helicase RuvA 96831 97433 -1
CDS - ZP_05402200.1 CdifQCD-2_020200014121 crossover junction endodeoxyribonuclease RuvC 97426 97935 -1
CDS - ZP_05402201.1 CdifQCD-2_020200014126 hypothetical protein 98247 98876 -1
CDS - ZP_05402202.1 CdifQCD-2_020200014131 hypothetical protein 99079 99402 1
CDS - ZP_05402203.1 CdifQCD-2_020200014136 hypothetical protein 99666 100520 1
CDS - ZP_05402204.1 CdifQCD-2_020200014141 hypothetical protein 100706 101704 -1