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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05402205.1 CdifQCD-2_020200014146 hypothetical protein 1 432 -1
CDS - ZP_05402206.1 CdifQCD-2_020200014151 putative gluconate permease 504 1886 -1
CDS garR ZP_05402207.1 CdifQCD-2_020200014156 tartronate semialdehyde reductase 2022 2912 -1
CDS - ZP_05402208.1 CdifQCD-2_020200014161 GntR family transcriptional regulator 3311 3982 1
CDS - ZP_05402209.1 CdifQCD-2_020200014166 hypothetical protein 4093 4632 1
CDS - ZP_05402210.1 CdifQCD-2_020200014171 hypothetical protein 4894 5202 1
CDS - ZP_05402211.1 CdifQCD-2_020200014176 ABC transporter, ATP-binding/permease protein 5363 7153 -1
CDS - ZP_05402212.1 CdifQCD-2_020200014181 ABC transporter, ATP-binding/permease protein 7153 8880 -1
CDS - ZP_05402213.1 CdifQCD-2_020200014186 YwjB 9125 9688 -1
CDS - ZP_05402214.1 CdifQCD-2_020200014191 putative amino acid racemase 10004 11116 1
CDS - ZP_05402215.1 CdifQCD-2_020200014196 hypothetical protein 11470 12513 1
CDS - ZP_05402216.1 CdifQCD-2_020200014201 hypothetical protein 12763 13596 -1
CDS - ZP_05402217.1 CdifQCD-2_020200014206 putative flavodoxin 13923 14453 -1
CDS - ZP_05402218.1 CdifQCD-2_020200014211 oxidoreductase 14535 15629 -1
CDS - ZP_05402219.1 CdifQCD-2_020200014216 MarR family regulatory protein 15631 16077 -1
CDS - ZP_05402220.1 CdifQCD-2_020200014221 aspartate aminotransferase 16383 17573 1
CDS - ZP_05402221.1 CdifQCD-2_020200014226 hypothetical protein 17743 18705 1
CDS - ZP_05402222.1 CdifQCD-2_020200014231 hypothetical protein 18827 19489 -1
CDS - ZP_05402223.1 CdifQCD-2_020200014236 putative collagen-binding protein 19859 20869 -1
CDS - ZP_05402224.1 CdifQCD-2_020200014241 putative collagen-binding protein 20922 22763 -1
CDS - ZP_05402225.1 CdifQCD-2_020200014246 putative cation efflux protein 23088 24266 -1
CDS - ZP_05402226.1 CdifQCD-2_020200014251 putative transport-related ATPase 24957 27731 -1
CDS - ZP_05402227.1 CdifQCD-2_020200014256 serine hydroxymethyltransferase 27902 29158 -1
CDS - ZP_05402228.1 CdifQCD-2_020200014261 putative aminobenzoyl-glutamate transport protein 29230 30780 -1
CDS - ZP_05402229.1 CdifQCD-2_020200014266 putative peptidase 30831 32015 -1
CDS - ZP_05402230.1 CdifQCD-2_020200014271 hypothetical protein 32246 33334 -1
CDS - ZP_05402231.1 CdifQCD-2_020200014276 putative two-component response regulator 33617 34315 -1
CDS - ZP_05402232.1 CdifQCD-2_020200014281 putative two-component sensor histidine kinase 34429 35934 -1
CDS - ZP_05402233.1 CdifQCD-2_020200014286 seryl-tRNA synthetase 36207 37478 -1
CDS - ZP_05402234.1 CdifQCD-2_020200014291 hypothetical protein 37851 37946 1
CDS - ZP_05402235.1 CdifQCD-2_020200014296 putative amidohydrolase 38265 39866 -1
CDS - ZP_05402236.1 CdifQCD-2_020200014301 nitrilase (carbon-nitrogen hydrolase) 40252 41178 1
CDS - ZP_05402237.1 CdifQCD-2_020200014306 putative zinc-binding dehydrogenase 41299 42297 -1
CDS - ZP_05402238.1 CdifQCD-2_020200014311 MarR family transcriptional regulator 42401 42838 1
CDS - ZP_05402239.1 CdifQCD-2_020200014316 rubrerythrin 42924 43511 1
CDS - ZP_05402240.1 CdifQCD-2_020200014321 hypothetical protein 43813 44433 -1
CDS - ZP_05402241.1 CdifQCD-2_020200014326 hypothetical protein 44441 45208 -1
CDS - ZP_05402242.1 CdifQCD-2_020200014331 hypothetical protein 45249 46070 -1
CDS - ZP_05402243.1 CdifQCD-2_020200014336 bifunctional protein 46359 48269 -1
CDS - ZP_05402244.1 CdifQCD-2_020200014341 DeoR family transcriptional regulator 48559 49344 -1
CDS - ZP_05402245.1 CdifQCD-2_020200014346 D-alanine--poly(phosphoribitol) ligase subunit 2 (D-alanyl carrier protein) 49559 49789 -1
CDS - ZP_05402246.1 CdifQCD-2_020200014351 D-alanyl transferase 49808 50956 -1
CDS - ZP_05402247.1 CdifQCD-2_020200014356 D-alanine--poly(phosphoribitol) ligase subunit 1 (D-alanine-activating enzyme) 50956 52470 -1
CDS - ZP_05402248.1 CdifQCD-2_020200014361 putative D-alanine transferase 52591 53781 -1
CDS - ZP_05402249.1 CdifQCD-2_020200014366 putative oxidoreductase 54071 55087 -1
CDS - ZP_05402250.1 CdifQCD-2_020200014371 hypothetical protein 55266 55805 -1
CDS - ZP_05402251.1 CdifQCD-2_020200014376 putative hydrolase 55906 56586 -1
CDS - ZP_05402252.1 CdifQCD-2_020200014381 putative transporter 56615 57904 -1
CDS - ZP_05402253.1 CdifQCD-2_020200014386 putative D-aminoacylase 58370 59968 -1
CDS - ZP_05402254.1 CdifQCD-2_020200014391 hypothetical protein 60136 60813 -1
CDS - ZP_05402255.1 CdifQCD-2_020200014396 hypothetical protein 60826 61521 -1
CDS - ZP_05402256.1 CdifQCD-2_020200014401 putative dipeptidase 61573 62772 -1
CDS - ZP_05402257.1 CdifQCD-2_020200014406 putative sigma-54-dependent transcriptional regulator 63033 65078 -1
CDS - ZP_05402258.1 CdifQCD-2_020200014411 putative esterase/halogenase 65489 66298 -1
CDS - ZP_05402259.1 CdifQCD-2_020200014416 putative bacterioferritin 66382 66915 -1
CDS - ZP_05402260.1 CdifQCD-2_020200014421 putative regulatory protease 67065 68414 -1
CDS - ZP_05402261.1 CdifQCD-2_020200014426 putative regulatory protease 68426 69808 -1
CDS - ZP_05402262.1 CdifQCD-2_020200014431 putative oxidoreductase 70052 71266 1
CDS - ZP_05402263.1 CdifQCD-2_020200014436 putative sigma-54 dependent regulatory protein 71463 73355 1
CDS - ZP_05402264.1 CdifQCD-2_020200014441 2-keto-3-deoxygluconate permease 73625 74599 1
CDS - ZP_05402265.1 CdifQCD-2_020200014446 altronate hydrolase (N-terminus) 74620 74895 1
CDS - ZP_05402266.1 CdifQCD-2_020200014451 putative altronate hydrolase 74908 76071 1
CDS - ZP_05402267.1 CdifQCD-2_020200014456 putative signaling protein 76401 78683 1
CDS - ZP_05402268.1 CdifQCD-2_020200014461 putative drug/sodium antiporter 78774 80114 -1
CDS - ZP_05402269.1 CdifQCD-2_020200014466 putative ferrichrome ABC transporter,ATP-binding protein 80126 80908 -1
CDS - ZP_05402270.1 CdifQCD-2_020200014471 putative ferrichrome ABC transporter, permease protein 80923 81945 -1
CDS - ZP_05402271.1 CdifQCD-2_020200014476 putative ferrichrome ABC transporter, permease protein 81951 82964 -1
CDS - ZP_05402272.1 CdifQCD-2_020200014481 putative ferrichrome ABC transporter,substrate-binding protein 83093 84031 -1
CDS - ZP_05402273.1 CdifQCD-2_020200014486 hypothetical protein 84380 84763 1
CDS - ZP_05402274.1 CdifQCD-2_020200014491 PTS system, lichenan-specific IIA component 84885 85202 -1
CDS - ZP_05402275.1 CdifQCD-2_020200014496 hypothetical protein 85215 85946 -1
CDS - ZP_05402276.1 CdifQCD-2_020200014501 6-phospho-beta-glucosidase 85972 87282 -1
CDS - ZP_05402277.1 CdifQCD-2_020200014506 PTS system, lichenan-specific IIC component 87359 88672 -1
CDS - ZP_05402278.1 CdifQCD-2_020200014511 PTS system, lichenan-specific IIB component 88694 89005 -1
CDS - ZP_05402279.1 CdifQCD-2_020200014516 GntR family transcriptional regulator 89205 89909 -1
CDS - ZP_05402280.1 CdifQCD-2_020200014521 alpha,alpha-phosphotrehalase 90162 91820 -1
CDS - ZP_05402281.1 CdifQCD-2_020200014526 PTS system, trehalose-specific enzyme II, BC component 91883 93316 -1
CDS - ZP_05402282.1 CdifQCD-2_020200014531 hypothetical protein 93546 95303 1
CDS - ZP_05402283.1 CdifQCD-2_020200014536 GntR family transcriptional regulator 95319 96050 -1
CDS - ZP_05402284.1 CdifQCD-2_020200014551 putative iron ABC transporter, ATP-binding protein 98201 99190 -1
CDS - ZP_05402285.1 CdifQCD-2_020200014556 ABC transporter, substrate-binding protein 99286 100335 -1
CDS - ZP_05402286.1 CdifQCD-2_020200014561 V-type ATP synthase subunit D 100612 101280 -1
CDS - ZP_05402287.1 CdifQCD-2_020200014566 V-type ATP synthase subunit B 101286 102659 -1
CDS - ZP_05402288.1 CdifQCD-2_020200014571 V-type ATP synthase subunit A 102656 104434 -1
CDS - ZP_05402289.1 CdifQCD-2_020200014576 V-type ATP synthase subunit F 104551 104868 -1
CDS - ZP_05402290.1 CdifQCD-2_020200014581 V-type ATP synthase subunit C 104861 105838 -1
CDS - ZP_05402291.1 CdifQCD-2_020200014586 V-type sodium ATP synthase subunit E 105853 106416 -1
CDS - ZP_05402292.1 CdifQCD-2_020200014591 V-type ATP synthase subunit K 106468 106959 -1
CDS - ZP_05402293.1 CdifQCD-2_020200014606 hypothetical protein 108888 109199 -1
CDS - ZP_05402294.1 CdifQCD-2_020200014611 hypothetical protein 109829 110104 -1
CDS - ZP_05402295.1 CdifQCD-2_020200014616 putative peptidoglycan-binding exported protein 110219 111628 -1
CDS - ZP_05402296.1 CdifQCD-2_020200014621 hypothetical protein 111998 112660 -1
CDS - ZP_05402297.1 CdifQCD-2_020200014626 putative signaling protein 112913 115132 -1
CDS - ZP_05402298.1 CdifQCD-2_020200014631 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 115408 117843 -1
CDS - ZP_05402299.1 CdifQCD-2_020200014636 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 117869 118063 -1
CDS - ZP_05402300.1 CdifQCD-2_020200014641 hypothetical protein 118567 118767 1
CDS spoVFB ZP_05402301.1 CdifQCD-2_020200014646 dipicolinate synthase subunit B 118974 119564 -1
CDS - ZP_05402302.1 CdifQCD-2_020200014651 dipicolinate synthase subunit A 119567 120442 -1
CDS - ZP_05402303.1 CdifQCD-2_020200014656 putative AMP-binding protein 120518 121909 -1
CDS - ZP_05402304.1 CdifQCD-2_020200014661 putative thiolase 121913 123049 -1