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Clostridium difficile QCD-23m63, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05402780.1 CdifQCD-2_020200017126 putative siroheme synthase 41 619 -1
CDS - ZP_05402781.1 CdifQCD-2_020200017131 delta-aminolevulinic acid dehydratase 762 1733 -1
CDS - ZP_05402782.1 CdifQCD-2_020200017136 porphyrin biosynthesis protein 1750 3249 -1
CDS hemC ZP_05402783.1 CdifQCD-2_020200017141 porphobilinogen deaminase 3239 4144 -1
CDS - ZP_05402784.1 CdifQCD-2_020200017146 sirohydrochlorin cobaltochelatase 4174 5652 -1
CDS - ZP_05402785.1 CdifQCD-2_020200017151 cobalt-precorrin-6a reductase 5671 6423 -1
CDS - ZP_05402786.1 CdifQCD-2_020200017156 cobalt-precorrin-3b c(17)-methyltransferase 6420 7145 -1
CDS - ZP_05402787.1 CdifQCD-2_020200017161 cobalamin biosynthesis protein CbiG 7142 8263 -1
CDS - ZP_05402788.1 CdifQCD-2_020200017166 precorrin-4 C(11)-methyltransferase 8247 8999 -1
CDS - ZP_05402789.1 CdifQCD-2_020200017171 cobalt-precorrin-6Y C(15)-methyltransferase 8992 9567 -1
CDS - ZP_05402790.1 CdifQCD-2_020200017176 cobalt-precorrin-6Y C(5)-methyltransferase 9557 10165 -1
CDS cbiD ZP_05402791.1 CdifQCD-2_020200017181 cobalt-precorrin-6A synthase 10162 11388 -1
CDS cbiC ZP_05402792.1 CdifQCD-2_020200017186 cobalt-precorrin-8X methylmutase 11397 12029 -1
CDS - ZP_05402793.1 CdifQCD-2_020200017191 putative cobalamin biosynthesis kinase 12017 12904 -1
CDS - ZP_05402794.1 CdifQCD-2_020200017196 pthreonine-phosphate decarboxylase 12906 13970 -1
CDS - ZP_05402795.1 CdifQCD-2_020200017201 cobalamin biosynthesis protein 14002 14973 -1
CDS - ZP_05402796.1 CdifQCD-2_020200017206 cobyrinic acid a,c-diamide synthase 14974 16350 -1
CDS - ZP_05402797.1 CdifQCD-2_020200017211 cobyric acid synthase 16389 17903 -1
CDS - ZP_05402798.1 CdifQCD-2_020200017216 putative cobalamin biosynthesis phosphoglycerate mutase 18264 18878 -1
CDS - ZP_05402799.1 CdifQCD-2_020200017221 cobalamin synthase 18898 19671 -1
CDS - ZP_05402800.1 CdifQCD-2_020200017226 bifunctional adenosylcobalamin biosynthesis protein 19681 20241 -1
CDS - ZP_05402801.1 CdifQCD-2_020200017231 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 20273 21319 -1
CDS - ZP_05402802.1 CdifQCD-2_020200017236 hypothetical protein 21539 21730 1
CDS - ZP_05402803.1 CdifQCD-2_020200017241 hypothetical protein 21771 21890 -1
CDS - ZP_05402804.1 CdifQCD-2_020200017246 putative aldose epimerase 22124 22996 1
CDS - ZP_05402805.1 CdifQCD-2_020200017251 putative aminotransferas 23193 24380 -1
CDS - ZP_05402806.1 CdifQCD-2_020200017256 putative peptidase 24385 25455 -1
CDS - ZP_05402807.1 CdifQCD-2_020200017261 PTS system, IIC component 25465 26787 -1
CDS - ZP_05402808.1 CdifQCD-2_020200017266 PTS system, IIB component 26904 27155 -1
CDS - ZP_05402809.1 CdifQCD-2_020200017271 PTS system, IIA component 27252 27557 -1
CDS - ZP_05402810.1 CdifQCD-2_020200017276 exoaminopeptidase 27572 28615 -1
CDS - ZP_05402811.1 CdifQCD-2_020200017281 putative transcription antiterminator 28618 30519 -1
CDS - ZP_05402812.1 CdifQCD-2_020200017286 tagatose-bisphosphate aldolase 30848 31699 -1
CDS - ZP_05402813.1 CdifQCD-2_020200017291 putative tagatose-6-phosphate ketose/aldose isomerase 31748 32911 -1
CDS - ZP_05402814.1 CdifQCD-2_020200017296 putative oxidoreductase 33389 34306 1
CDS - ZP_05402815.1 CdifQCD-2_020200017301 putative tagatose-6-phosphate kinase 34435 35364 -1
CDS - ZP_05402816.1 CdifQCD-2_020200017306 GntR family transcriptional regulator 35634 36359 1
CDS - ZP_05402817.1 CdifQCD-2_020200017311 N-acetylglucosamine-6-phosphate deacetylase 36442 37596 1
CDS - ZP_05402818.1 CdifQCD-2_020200017316 putative exported carboxy-terminal processing protease 37778 38926 -1
CDS - ZP_05402819.1 CdifQCD-2_020200017321 putative 5-formyltetrahydrofolate cyclo-ligase 39193 39660 1
CDS - ZP_05402820.1 CdifQCD-2_020200017326 hypothetical protein 39842 40258 -1
CDS - ZP_05402821.1 CdifQCD-2_020200017331 hypothetical protein 40484 41578 -1
CDS - ZP_05402822.1 CdifQCD-2_020200017336 transketolase, pyridine binding subunit 42000 42941 -1
CDS - ZP_05402823.1 CdifQCD-2_020200017341 transketolase, thiamine disphosphate-binding subunit 42934 43761 -1
CDS - ZP_05402824.1 CdifQCD-2_020200017346 putative regulator of cell growth 43932 44294 -1
CDS - ZP_05402825.1 CdifQCD-2_020200017351 CopG-family transcriptional regulator 44284 44571 -1
CDS - ZP_05402826.1 CdifQCD-2_020200017356 alanine racemase 44604 45761 -1
CDS - ZP_05402827.1 CdifQCD-2_020200017361 putative lipoprotein 45776 46366 -1
CDS - ZP_05402828.1 CdifQCD-2_020200017366 hypothetical protein 46387 46848 -1
CDS acpS ZP_05402829.1 CdifQCD-2_020200017371 4'-phosphopantetheinyl transferase 46863 47243 -1
CDS - ZP_05402830.1 CdifQCD-2_020200017376 ATP synthase epsilon chain (partial) 47695 47955 -1
CDS - ZP_05402831.1 CdifQCD-2_020200017381 F0F1 ATP synthase subunit beta 47958 49352 -1
CDS - ZP_05402832.1 CdifQCD-2_020200017386 ATP synthase subunit gamma 49365 50243 -1
CDS - ZP_05402833.1 CdifQCD-2_020200017391 ATP synthase alpha chain 50271 51773 -1
CDS - ZP_05402834.1 CdifQCD-2_020200017396 ATP synthase subunit delta 51790 52335 -1
CDS - ZP_05402835.1 CdifQCD-2_020200017401 ATP synthase B chain 52332 52829 -1
CDS - ZP_05402836.1 CdifQCD-2_020200017406 F0F1 ATP synthase subunit C 52952 53212 -1
CDS - ZP_05402837.1 CdifQCD-2_020200017411 ATP synthase A chain 53281 53985 -1
CDS - ZP_05402838.1 CdifQCD-2_020200017416 ATP synthase protein I 53988 54374 -1
CDS - ZP_05402839.1 CdifQCD-2_020200017421 putative ATP synthase protein 54379 54606 -1
CDS - ZP_05402840.1 CdifQCD-2_020200017426 putative cytidine and deoxycytidylate deaminase 54791 55228 -1
CDS - ZP_05402841.1 CdifQCD-2_020200017431 hypothetical protein 55454 56269 -1
CDS - ZP_05402842.1 CdifQCD-2_020200017436 uracil phosphoribosyltransferase 56569 57198 -1
CDS - ZP_05402843.1 CdifQCD-2_020200017441 ribose-5-phosphate isomerase 2 57234 57686 -1
CDS - ZP_05402844.1 CdifQCD-2_020200017446 low molecular weight protein-tyrosine-phosphatase 57703 58152 -1
CDS - ZP_05402845.1 CdifQCD-2_020200017451 hypothetical protein 58169 59209 -1
CDS - ZP_05402846.1 CdifQCD-2_020200017456 putative zinc transporter 59238 59918 -1
CDS prfA ZP_05402847.1 CdifQCD-2_020200017461 peptide chain release factor 1 60047 61111 -1
CDS - ZP_05402848.1 CdifQCD-2_020200017466 protein methyltransferase 61155 62003 -1
CDS - ZP_05402849.1 CdifQCD-2_020200017471 hypothetical protein 62021 62914 -1
CDS - ZP_05402850.1 CdifQCD-2_020200017476 50S ribosomal protein L31 63059 63259 -1
CDS rho ZP_05402851.1 CdifQCD-2_020200017481 transcription termination factor Rho 63412 65001 -1
CDS - ZP_05402852.1 CdifQCD-2_020200017486 hypothetical protein 65385 65495 -1
CDS - ZP_05402853.1 CdifQCD-2_020200017491 UTP--glucose-1-phosphate uridylyltransferase 65516 66481 -1
CDS - ZP_05402854.1 CdifQCD-2_020200017496 putative oligopeptidase 66595 68487 -1
CDS - ZP_05402855.1 CdifQCD-2_020200017501 stage II sporulation protein e 68838 71210 -1
CDS - ZP_05402856.1 CdifQCD-2_020200017506 putative exopolyphosphatase 71300 72220 -1
CDS - ZP_05402857.1 CdifQCD-2_020200017511 putative septum formation protein 72333 72617 -1
CDS - ZP_05402858.1 CdifQCD-2_020200017516 hypothetical protein 72623 73156 -1
CDS - ZP_05402859.1 CdifQCD-2_020200017521 hypothetical protein 73157 73411 -1
CDS - ZP_05402860.1 CdifQCD-2_020200017526 putative RNA-binding protein 73473 73715 -1
CDS - ZP_05402861.1 CdifQCD-2_020200017531 hypothetical protein 73702 73794 -1
CDS - ZP_05402862.1 CdifQCD-2_020200017536 DNA-binding protein HU 73787 74065 -1
CDS - ZP_05402863.1 CdifQCD-2_020200017541 bifunctional protein 74154 75602 -1
CDS - ZP_05402864.1 CdifQCD-2_020200017546 stage V sporulation protein B 75709 77322 -1
CDS - ZP_05402865.1 CdifQCD-2_020200017551 stage V sporulation protein T 77442 77981 -1
CDS - ZP_05402866.1 CdifQCD-2_020200017556 putative foldase lipoprotein (late stage protein export lipoprotein) 78104 79099 -1
CDS - ZP_05402867.1 CdifQCD-2_020200017561 transcription-repair coupling factor 79130 82516 -1
CDS - ZP_05402868.1 CdifQCD-2_020200017566 peptidyl-tRNA hydrolase 82533 83093 -1
CDS - ZP_05402869.1 CdifQCD-2_020200017571 putative type IV prepilin leader peptidase 83107 83757 -1
CDS - ZP_05402870.1 CdifQCD-2_020200017576 putative type IV prepilin leader peptidase 83859 84641 -1
CDS - ZP_05402871.1 CdifQCD-2_020200017581 putative type IV pilus retraction protein (putative twitching mobility protein) 84622 85704 -1
CDS - ZP_05402872.1 CdifQCD-2_020200017586 hypothetical protein 85804 87342 -1
CDS - ZP_05402873.1 CdifQCD-2_020200017591 putative type IV pilin 87363 87890 -1
CDS - ZP_05402874.1 CdifQCD-2_020200017596 putative type IV pilin 87926 88486 -1
CDS - ZP_05402875.1 CdifQCD-2_020200017601 putative type IV pilus assembly protein 88519 89427 -1
CDS - ZP_05402876.1 CdifQCD-2_020200017606 putaive membrane protein 89420 91132 -1
CDS - ZP_05402877.1 CdifQCD-2_020200017611 type IV pilus assembly protein 91147 92355 -1
CDS - ZP_05402878.1 CdifQCD-2_020200017616 type IV pilus assembly protein 92367 94043 -1
CDS - ZP_05402879.1 CdifQCD-2_020200017621 pilin 94194 94715 -1