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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02638181.1 AC5_0568 RNA polymerase sigma-70 factor 1131 1706 -1
CDS - ZP_02638182.1 AC5_0567 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein 1963 3516 -1
CDS - ZP_02638183.1 AC5_0566 glycine betaine/L-proline transport, ATP-binding protein 3509 4645 -1
CDS - ZP_02638185.1 AC5_0565 flavodoxin family protein 5951 6607 -1
CDS - ZP_02638186.1 AC5_0564 copper-translocating P-type ATPase 6908 9559 1
CDS - ZP_02638187.1 AC5_0563 conserved hypothetical protein 9678 10325 -1
CDS - ZP_02638188.1 AC5_0562 putative exo-alpha-sialidase 10471 13992 -1
CDS - ZP_02638189.1 AC5_0561 conserved hypothetical protein 14201 14464 1
CDS speB ZP_02638190.1 AC5_0560 agmatinase 14779 15636 -1
CDS speE ZP_02638191.1 AC5_0559 spermidine synthase 15623 16474 -1
CDS - ZP_02638192.1 AC5_0558 Orn/Lys/Arg decarboxylase 16489 17943 -1
CDS speD ZP_02638193.2 AC5_0557 S-adenosylmethionine decarboxylase 17961 18767 -1
CDS - ZP_02638194.1 AC5_0556 nitrite/sulfite reductase homolog 19089 20639 -1
CDS - ZP_02638195.1 AC5_0555 conserved domain protein 20888 21118 1
CDS - ZP_02638196.1 AC5_0554 hypothetical protein 21132 21347 1
CDS - ZP_02638197.1 AC5_0553 amino acid/peptide transporter 21510 22901 -1
CDS - ZP_02638198.1 AC5_0552 putative membrane protein 23306 24439 -1
CDS - ZP_02638199.1 AC5_0551 transcriptional regulator, MarR family 24692 25144 1
CDS - ZP_02638200.1 AC5_0550 TrkA domain protein 25259 25939 -1
CDS - ZP_02638201.1 AC5_0549 hypothetical protein 25975 26163 -1
CDS - ZP_02638202.1 AC5_0548 NAD-dependent 4-hydroxybutyrate dehydrogenase 26172 27287 -1
CDS - ZP_02638203.1 AC5_0547 hypothetical protein 27598 28011 -1
CDS - ZP_02638204.1 AC5_0544 putative membrane protein 29824 30465 -1
CDS - ZP_02638205.1 AC5_0543 hypothetical protein 30991 31131 -1
CDS - ZP_02638206.1 AC5_0542 putative lipoprotein 31588 32118 -1
CDS - ZP_02638207.1 AC5_0541 hypothetical protein 32276 32455 -1
CDS - ZP_02638208.1 AC5_0540 response regulator 32536 33204 -1
CDS - ZP_02638209.1 AC5_0539 sensor histidine kinase 33204 34754 -1
CDS - ZP_02638210.1 AC5_0538 putative D-lactate dehydrogenase 35050 36048 -1
CDS - ZP_02638211.1 AC5_0537 transporter, auxin efflux carrier family 36375 37424 -1
CDS - ZP_02638212.1 AC5_0536 hypothetical protein 37679 38560 -1
CDS - ZP_02638213.1 AC5_0535 ABC transporter, permease/ATP-binding protein 39076 40932 -1
CDS - ZP_02638214.1 AC5_0534 ABC transporter, permease/ATP-binding protein 40925 43222 -1
CDS - ZP_02638215.1 AC5_0533 transcriptional regulator, MarR family 43545 43991 1
CDS - ZP_02638216.1 AC5_0532 HAD hydrolase, IIB family 44125 44919 -1
CDS - ZP_02638217.1 AC5_0531 PTS system, L-Ascorbate family, IIC component 45283 46554 -1
CDS - ZP_02638218.1 AC5_0530 PTS system, lactose/cellobiose-specific IIB component 46595 46867 -1
CDS - ZP_02638219.1 AC5_0529 PTS system, L-Ascorbate family, IIA component 47042 47485 -1
CDS - ZP_02638220.1 AC5_0528 hypothetical protein 47859 48665 -1
CDS - ZP_02638221.2 AC5_0527 sensor histidine kinase 48843 50138 -1
CDS - ZP_02638222.1 AC5_0525 DNA-binding response regulator 50143 50859 -1
CDS - ZP_02638223.1 AC5_0524 von Willebrand factor type A domain protein 51138 53000 -1
CDS - ZP_02638224.1 AC5_0523 conserved hypothetical protein 53017 53643 -1
CDS - ZP_02638225.1 AC5_0522 conserved hypothetical protein 53646 54377 -1
CDS - ZP_02638226.1 AC5_0521 hypothetical protein 54425 55060 -1
CDS sipW ZP_02638227.1 AC5_0520 signal peptidase I 55114 55638 -1
CDS - ZP_02638228.1 AC5_0519 sortase B 55877 56626 1
CDS - ZP_02638229.2 AC5_0518 alpha-galactosidase 56774 58969 -1
tRNA - - AC5_0517 tRNA-Met 59270 59345 -1
CDS - ZP_02638230.1 AC5_0516 ISCpe2, transposase OrfB 59574 60728 -1
CDS - ZP_02638231.1 AC5_0515 ISCpe2, transposase OrfA 60739 61140 -1
CDS - ZP_02638233.1 AC5_0514 hypothetical protein 61322 62014 -1
CDS galU ZP_02638234.1 AC5_0513 UTP-glucose-1-phosphate uridylyltransferase 62338 63282 -1
CDS galE ZP_02638235.1 AC5_0512 UDP-glucose 4-epimerase 63564 64580 -1
CDS - ZP_02638236.1 AC5_0511 hypothetical protein 64658 66886 -1
CDS - ZP_02638237.1 AC5_0510 putative RNA polymerase sigma factor 67306 67953 -1
CDS - ZP_02638238.1 AC5_0509 putative capsular polysaccharide transporter protein 68627 70000 -1
CDS rfbB ZP_02638239.1 AC5_0508 dTDP-glucose 4,6-dehydratase 70022 71071 -1
CDS rfbD ZP_02638240.1 AC5_0507 dTDP-4-dehydrorhamnose reductase 71099 71986 -1
CDS rfbC ZP_02638241.1 AC5_0506 dTDP-4-dehydrorhamnose 3,5-epimerase 72000 72569 -1
CDS rfbA ZP_02638242.1 AC5_0505 glucose-1-phosphate thymidylyltransferase 72582 73493 -1
CDS - ZP_02638243.1 AC5_0504 O-antigen polymerase family 73490 74782 -1
CDS - ZP_02638244.1 AC5_0503 putative WsaD 74766 75665 -1
CDS - ZP_02638245.1 AC5_0502 hypothetical glycosyltransferase 75667 76812 -1
CDS - ZP_02638246.1 AC5_0501 WbtD 77326 78408 -1
CDS - ZP_02638247.1 AC5_0500 carbamoylphosphate synthase, large subunit 78423 79379 -1
CDS - ZP_02638248.2 AC5_0499 WfbC 79381 79893 -1
CDS - ZP_02638249.1 AC5_0498 undecaprenyl-phosphate galactosephosphotransferase 79903 80517 -1
CDS - ZP_02638250.1 AC5_0497 putative perosamine synthetase 80548 81699 -1
CDS - ZP_02638251.1 AC5_0496 capsular polysaccharide biosynthesis protein 81725 83635 -1
CDS - ZP_02638252.1 AC5_0495 capsular polysaccharide biosynthesis protein 83813 84466 -1
CDS - ZP_02638253.1 AC5_0494 capsule chain length determinant protein 84479 85177 -1
CDS - ZP_02638254.1 AC5_0493 conserved hypothetical protein 85660 86073 -1
CDS - ZP_02638255.1 AC5_0492 putative membrane protein 86914 87951 -1
CDS - ZP_02638256.1 AC5_0491 sensor histidine kinase 88420 90651 -1
CDS - ZP_02638257.1 AC5_0490 DNA-binding response regulator 90626 91330 -1
CDS - ZP_02638258.1 AC5_0489 conserved hypothetical protein 91560 92192 -1
CDS - ZP_02638260.1 AC5_0487 putative membrane protein 93065 94885 -1
CDS - ZP_02638261.1 AC5_0486 transcriptional regulator, MerR family 94998 95783 1
CDS - ZP_02638262.1 AC5_0485 glyoxalase I 96096 96494 -1
CDS - ZP_02638263.2 AC5_0484 conserved hypothetical protein 96606 96929 -1
CDS - ZP_02638264.1 AC5_0483 alcohol dehydrogenase, iron-containing 97244 98392 -1
CDS - ZP_02638265.1 AC5_0482 transcriptional regulator, AraC family 98582 99439 1
CDS - ZP_02638266.1 AC5_0481 putative lactoylglutathione lyase 99572 99952 -1
CDS - ZP_02638267.1 AC5_0480 putative 4Fe-4S ferredoxin, iron-sulfur binding 100226 101047 -1
CDS - ZP_02638268.1 AC5_0479 BFD-like iron-sulfur cluster-binding protein 101232 101405 -1
CDS - ZP_02638269.1 AC5_0478 putative sulfite/nitrite reductase 101595 102284 -1
CDS - ZP_02638270.1 AC5_0477 putative iron ABC transporter, ATP-binding protein 102574 103254 -1
CDS - ZP_02638271.1 AC5_0476 putative iron ABC transporter, permease protein 103257 104849 -1
CDS - ZP_02638272.1 AC5_0475 iron compound ABC transporter, iron compound-binding protein 104849 105901 -1
CDS - ZP_02638273.1 AC5_0474 CBS/transporter associated domain protein 106176 107513 -1
CDS - ZP_02638274.1 AC5_0473 conserved hypothetical protein 108059 108475 1
CDS - ZP_02638275.1 AC5_0472 conserved hypothetical protein 108481 108816 1
CDS - ZP_02638276.1 AC5_0471 acetyltransferase, GNAT family 108875 109363 -1
CDS - ZP_02638277.1 AC5_0470 putative lipoprotein 109739 111034 -1
CDS - ZP_02638278.1 AC5_0469 hydrolase, alpha/beta fold family 111118 111957 -1
CDS - ZP_02638279.1 AC5_0468 conserved hypothetical protein 112240 113082 -1
CDS lepB ZP_02638280.1 AC5_0467 signal peptidase I 113290 113832 1
CDS - ZP_02638281.1 AC5_0466 hypothetical protein 113920 114447 -1
CDS - ZP_02638282.1 AC5_0465 hypothetical protein 114841 114996 -1