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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02638427.1 AC5_2505 small, acid-soluble spore protein 1 2018 2200 1
CDS - ZP_02638428.1 AC5_2504 Ser/Thr protein phosphatase family protein 2481 3620 1
CDS - ZP_02638429.1 AC5_2503 conserved hypothetical protein 3610 6378 1
CDS - ZP_02638430.1 AC5_2502 ABC transporter, substrate-binding protein 6605 7501 1
CDS ptsG ZP_02638431.1 AC5_2501 PTS system, glucose-specific IIBC component 7672 9201 1
CDS - ZP_02638432.1 AC5_2500 mutS domain protein 9505 11292 1
CDS - ZP_02638433.1 AC5_2499 conserved hypothetical protein 11474 13219 1
CDS - ZP_02638434.1 AC5_2498 exonuclease family protein 13474 14376 1
CDS - ZP_02638435.1 AC5_2497 CBS domain protein 14462 14872 1
CDS - ZP_02638436.1 AC5_2496 conserved hypothetical protein 15039 15803 1
CDS - ZP_02638437.1 AC5_2495 heavy metal binding protein 15908 16111 1
CDS - ZP_02638438.1 AC5_2494 ribosomal protein S1 family 16257 17393 1
CDS pyk ZP_02638439.1 AC5_2493 pyruvate kinase 17510 18934 -1
CDS pepD ZP_02638440.1 AC5_2492 aminoacyl-histidine dipeptidase 19067 20518 1
CDS - ZP_02638441.1 AC5_2491 conserved hypothetical protein 20853 21671 1
CDS - ZP_02638442.1 AC5_2490 conserved hypothetical protein 21933 22736 1
CDS maf ZP_02638443.1 AC5_2489 maf protein 22962 23540 1
CDS - ZP_02638444.1 AC5_2488 DNA repair protein, RadC family 23587 24270 1
CDS mreB ZP_02638445.1 AC5_2487 rod shape-determining protein MreB 24290 25318 1
CDS mreC ZP_02638446.1 AC5_2486 rod shape-determining protein MreC 25322 26173 1
CDS mreD ZP_02638447.1 AC5_2485 rod shape-determining protein MreD 26189 26686 1
CDS - ZP_02638448.1 AC5_2484 putative penicillin-binding protein 26695 29766 1
CDS minC ZP_02638449.1 AC5_2483 septum site-determining protein MinC 30013 30648 1
CDS minD ZP_02638450.1 AC5_2482 septum site-determining protein MinD 30677 31474 1
CDS minE ZP_02638451.1 AC5_2481 cell division topological specificity factor MinE 31485 31757 1
CDS rodA ZP_02638452.1 AC5_2480 rod shape-determining protein RodA 31905 33029 1
CDS - ZP_02638453.1 AC5_2479 M23 peptidase domain protein 33181 34023 1
CDS - ZP_02638454.1 AC5_2478 peptidase, M50 family 34020 34874 1
CDS - ZP_02638455.1 AC5_2477 radical SAM domain protein 35006 36859 1
CDS - ZP_02638456.1 AC5_2476 conserved hypothetical protein 36843 37544 1
CDS - ZP_02638457.1 AC5_2475 ribonuclease, Rne/Rng family 37561 39003 1
CDS rplU ZP_02638458.1 AC5_2474 ribosomal protein L21 39129 39440 1
CDS - ZP_02638459.2 AC5_2473 conserved hypothetical protein 39516 39821 1
CDS rpmA ZP_02638460.1 AC5_2472 ribosomal protein L27 39825 40127 1
CDS obg ZP_02638461.1 AC5_2471 spo0B-associated GTP-binding protein 40294 41580 1
CDS - ZP_02638462.1 AC5_2470 putative RNA-binding protein 41598 41900 1
CDS nadD ZP_02638463.1 AC5_2469 nicotinate nucleotide adenylyltransferase 41902 42510 1
CDS - ZP_02638464.1 AC5_2468 HD domain protein 42513 43082 1
CDS - ZP_02638465.1 AC5_2467 cell envelope-related transcriptional attenuator domain protein 43105 44418 1
CDS - ZP_02638466.1 AC5_2466 pseudouridine synthase, RluA family 44415 45311 1
CDS dacF ZP_02638467.1 AC5_2465 D-alanyl-D-alanine carboxypeptidase 45343 46677 -1
CDS - ZP_02638468.1 AC5_2464 putative comE operon protein 1 46873 47637 1
CDS selA ZP_02638471.1 AC5_2462 L-seryl-tRNA selenium transferase 48730 50118 1
CDS selB ZP_02638472.1 AC5_2461 selenocysteine-specific translation elongation factor 50119 52026 1
CDS - ZP_02638473.1 AC5_2460 hypothetical protein 52213 52662 1
CDS rumA ZP_02638474.1 AC5_2459 23S rRNA -methyltransferase RumA 52690 54045 1
CDS - ZP_02638475.1 AC5_2458 subtilase family protein 54502 56112 1
CDS - ZP_02638476.1 AC5_2457 subtilase family protein 56114 57868 1
CDS - ZP_02638477.1 AC5_2456 major facilitator family transporter 57993 59414 -1
CDS - ZP_02638478.1 AC5_2455 conserved hypothetical protein 59702 60151 1
CDS - ZP_02638479.1 AC5_2454 hypothetical protein 60352 61398 1
CDS - ZP_02638480.1 AC5_2453 lipoprotein, putative 61411 64653 1
CDS - ZP_02638481.1 AC5_2452 putative thiamin biosynthesis lipoprotein ApbE 64825 65856 1
CDS - ZP_02638482.1 AC5_2451 conserved hypothetical protein 65857 66231 1
CDS - ZP_02638483.1 AC5_2450 putative membrane protein 66249 66764 1
CDS prmA ZP_02638484.1 AC5_2449 ribosomal protein L11 methyltransferase 67172 68032 -1
CDS - ZP_02638485.1 AC5_2448 helicase domain protein 68293 70050 1
CDS - ZP_02638486.1 AC5_2447 conserved hypothetical protein 70062 70352 1
CDS - ZP_02638487.1 AC5_2446 hypothetical protein 70485 70880 1
CDS virI ZP_02638488.1 AC5_2445 DNA-binding response regulator 71082 71780 1
CDS virJ ZP_02638489.1 AC5_2444 sensor histidine kinase 71770 73218 1
CDS - ZP_02638490.1 AC5_2443 hypothetical protein 73335 74591 1
CDS - ZP_02638491.1 AC5_2442 hypothetical protein 74610 75431 1
CDS - ZP_02638492.1 AC5_2441 conserved hypothetical protein 75938 76354 1
CDS - ZP_02638493.1 AC5_2440 iron-sulfur cluster-binding protein 76489 77268 -1
CDS - ZP_02638494.1 AC5_2439 amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family 77441 78949 1
CDS - ZP_02638495.1 AC5_2438 amino acid ABC transporter, ATP-binding protein 78968 79705 1
CDS - ZP_02638496.1 AC5_2437 transcriptional regulator, PadR family 79752 80057 -1
CDS - ZP_02638497.1 AC5_2436 FemAB family protein 80419 81756 -1
CDS - ZP_02638498.1 AC5_2435 putative membrane protein 82023 82700 -1
CDS - ZP_02638499.1 AC5_2434 sensor histidine kinase 82922 84658 1
CDS - ZP_02638500.1 AC5_2433 DNA-binding response regulator, AraC family 84663 86186 1
CDS - ZP_02638501.1 AC5_2432 molybdenum cofactor synthesis protein 86528 87019 1
CDS modA ZP_02638502.1 AC5_2431 molybdate ABC transporter, molybdate-binding protein 87004 87774 1
CDS modB ZP_02638503.1 AC5_2430 molybdate ABC transporter, permease protein 87778 88434 1
CDS moaC ZP_02638504.1 AC5_2429 molybdenum cofactor biosynthesis protein C 88473 88949 1
CDS - ZP_02638505.1 AC5_2428 ABC transporter, permease protein 89177 90145 1
CDS - ZP_02638506.1 AC5_2427 ABC transporter, permease protein 90163 91119 1
CDS - ZP_02638507.1 AC5_2426 putative alpha-mannosidase 91436 94570 1
CDS - ZP_02638508.1 AC5_2425 putative membrane protein 94638 95132 -1
CDS - ZP_02638509.1 AC5_2424 bacterial extracellular solute-binding protein 95517 96965 1
CDS - ZP_02638510.1 AC5_2423 ROK family protein 97105 97998 1
CDS - ZP_02638511.1 AC5_2422 alpha-glucosidase 98047 100287 1
CDS - ZP_02638512.1 AC5_2421 amino acid permease family protein 100635 102125 1
CDS - ZP_02638514.1 AC5_2420 alcohol dehydrogenase, short-chain family 102356 103525 1
CDS - ZP_02638515.1 AC5_2419 putative sporulation protein YtaF 103695 104303 -1
CDS uvdE ZP_02638516.1 AC5_2418 UV damage endonuclease UvdE 104388 105626 -1
CDS - ZP_02638517.1 AC5_2417 glycosyl transferase, group 2 family protein 106479 107879 1
CDS ybbB ZP_02638518.1 AC5_2416 tRNA 2-selenouridine synthase 108125 109195 1
CDS - ZP_02638519.1 AC5_2415 DNA topoisomerase, GyrB/ParE subunit family 109185 111131 1
CDS gyrA ZP_02638520.1 AC5_2414 DNA topoisomerase, GyrA/ParC subunit family 111145 114084 1
CDS - ZP_02638521.1 AC5_2413 DJ-1 family protein 114096 114671 1
CDS - ZP_02638522.1 AC5_2412 peptidase, M16 family 114885 116096 1
CDS recJ ZP_02638523.1 AC5_2411 single-stranded-DNA-specific exonuclease RecJ 116108 117886 1
CDS sspC1 ZP_02638524.1 AC5_2410 small, acid-soluble spore protein 118007 118186 -1
CDS murG ZP_02638525.1 AC5_2409 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 118371 119444 1
CDS - ZP_02638526.1 AC5_2408 flavodoxin 119651 120076 1
CDS nifJ ZP_02638527.1 AC5_2407 pyruvate-flavodoxin oxidoreductase 120181 123696 1
CDS - ZP_02638528.1 AC5_2406 glutamate:gamma aminobutyrate antiporter family protein 124400 125818 1
CDS - ZP_02638529.1 AC5_2405 putative membrane protein 125938 126993 1