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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rph ZP_02638788.1 AC5_2645 ribonuclease PH 530 1276 -1
CDS - ZP_02638789.1 AC5_2646 conserved hypothetical protein 1498 3201 1
CDS - ZP_02638790.1 AC5_2647 bacterial extracellular solute-binding protein, family 5 3469 4989 -1
CDS - ZP_02638791.1 AC5_2648 hypothetical protein 5199 5663 -1
CDS - ZP_02638792.1 AC5_2649 conserved hypothetical protein 5787 6110 1
CDS ligA ZP_02638793.1 AC5_2650 DNA ligase, NAD-dependent 6147 8135 -1
CDS pcrA ZP_02638794.1 AC5_2651 ATP-dependent DNA helicase PcrA 8173 10428 -1
CDS - ZP_02638795.1 AC5_2652 hypothetical protein 10640 11428 -1
CDS - ZP_02638796.1 AC5_2653 hypothetical protein 11445 11993 -1
CDS - ZP_02638797.1 AC5_2654 gram positive anchor protein 11995 12666 -1
CDS - ZP_02638798.1 AC5_2655 RNA pseudouridine synthase family protein 13219 13938 -1
CDS - ZP_02638799.1 AC5_2656 two component regulator three Y motif protein 14310 16355 -1
CDS - ZP_02638800.1 AC5_2657 YaiI/YqxD family protein 16728 17177 -1
CDS pgi ZP_02638801.1 AC5_2658 glucose-6-phosphate isomerase 17374 18726 -1
CDS - ZP_02638802.1 AC5_2659 conserved hypothetical protein 18756 18965 -1
CDS - ZP_02638803.1 AC5_2660 oligopeptide/dipeptide ABC transporter, ATP-binding protein 19167 20135 -1
CDS - ZP_02638804.1 AC5_2661 oligopeptide/dipeptide ABC transporter, ATP-binding protein 20136 21113 -1
CDS - ZP_02638805.1 AC5_2662 oligopeptide/dipeptide ABC transporter, permease protein 21127 22041 -1
CDS - ZP_02638806.1 AC5_2663 oligopeptide/dipeptide ABC transporter, permease protein 22056 23021 -1
CDS - ZP_02638807.1 AC5_2664 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein 23096 24835 -1
CDS - ZP_02638808.1 AC5_2665 major facilitator family transporter 25465 26757 1
CDS guaA ZP_02638809.1 AC5_2666 GMP synthase 27124 28653 -1
CDS guaB ZP_02638810.1 AC5_2667 inosine-5'-monophosphate dehydrogenase 28759 30213 -1
CDS - ZP_02638811.1 AC5_2668 von Willebrand factor type A domain protein 30924 34973 -1
CDS - ZP_02638812.1 AC5_2669 prepilin peptidase-dependent 34995 35582 -1
CDS - ZP_02638813.1 AC5_2670 conserved hypothetical protein 35609 37885 -1
CDS - ZP_02638814.1 AC5_2671 conserved hypothetical protein 37890 39038 -1
CDS - ZP_02638815.1 AC5_2672 hypothetical protein 39059 40276 -1
CDS - ZP_02638816.1 AC5_2673 type IV pilus biogenesis protein PilN 40266 40832 -1
CDS - ZP_02638817.1 AC5_2674 type IV pilus assembly protein PilM 40847 42001 -1
CDS - ZP_02638818.1 AC5_2675 prepilin peptidase-dependent 42090 42563 -1
CDS - ZP_02638819.1 AC5_2676 prepilin peptidase-dependent 42579 43052 -1
CDS - ZP_02638820.1 AC5_2677 putative type IV pilin 43105 43623 -1
CDS - ZP_02638821.1 AC5_2678 bacterial type II secretion system protein F 43649 44854 -1
CDS - ZP_02638822.1 AC5_2679 secretion system protein E 44881 46575 -1
CDS - ZP_02638823.1 AC5_2680 Type IV leader peptidase family protein 46645 47388 -1
CDS - ZP_02638824.1 AC5_2681 putative type IV pilin 47664 48086 -1
CDS groEL ZP_02638825.1 AC5_2682 chaperonin, 60 kDa 48752 50371 -1
CDS groS ZP_02638826.1 AC5_2683 chaperonin, 10 kDa 50426 50710 -1
CDS - ZP_02638828.1 AC5_2685 conserved hypothetical protein 51870 52175 1
CDS - ZP_02638829.2 AC5_2686 putative 8-oxoguanine DNA glycosylase 52298 53236 -1
CDS - ZP_02638830.1 AC5_2687 conserved hypothetical protein 53246 53650 -1
CDS - ZP_02638831.2 AC5_2688 signal peptidase I 53892 54392 -1
CDS - ZP_02638832.1 AC5_2689 ABC transporter, ATP-binding protein/permease protein 54534 56234 -1
CDS hbd ZP_02638833.1 AC5_2690 3-hydroxybutyryl-CoA dehydrogenase 56493 57341 -1
CDS - ZP_02638834.1 AC5_2691 electron transfer flavoprotein, alpha subunit/FixB family protein 57455 58462 -1
CDS - ZP_02638835.1 AC5_2692 electron transfer flavoprotein, beta subunit/FixA family protein 58484 59263 -1
CDS bcd ZP_02638836.1 AC5_2693 butyryl-CoA dehydrogenase 59282 60421 -1
CDS crt ZP_02638837.1 AC5_2694 3-hydroxybutyryl-CoA dehydratase 60468 61250 -1
CDS - ZP_02638838.1 AC5_2695 DNA-binding protein 61513 62151 -1
CDS cadA ZP_02638839.1 AC5_2696 cadmium-translocating P-type ATPase 62617 64833 -1
CDS - ZP_02638840.1 AC5_2697 putative cadmium resistance transcriptional regulator CadC 64849 65208 -1
CDS - ZP_02638841.1 AC5_2698 transcriptional regulator, GntR family 65684 66304 -1
CDS - ZP_02638842.1 AC5_2699 conserved hypothetical protein 66394 66972 -1
CDS - ZP_02638843.1 AC5_2700 hypothetical protein 67357 67923 -1
CDS - ZP_02638844.1 AC5_2701 mannose-1-phosphate guanylyltransferase 68152 69222 -1
CDS - ZP_02638845.1 AC5_2702 glycosyl hydrolase, family 1 69460 70839 -1
CDS - ZP_02638846.1 AC5_2703 aldehyde dehydrogenase family protein 71536 72912 -1
CDS - ZP_02638847.1 AC5_2704 conserved hypothetical protein 73063 73773 -1
CDS - ZP_02638848.2 AC5_2705 conserved hypothetical protein 73900 74823 1
CDS - ZP_02638849.1 AC5_2706 RNA pseudouridine synthase family protein 75065 75961 -1
CDS - ZP_02638850.1 AC5_2707 conserved hypothetical protein 75983 76996 -1
CDS - ZP_02638851.1 AC5_2708 sortase family protein 77057 77734 -1
CDS ispF ZP_02638852.1 AC5_2709 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 78084 78554 1
CDS - ZP_02638853.1 AC5_2710 Na+/H+ antiporter family protein 78730 80043 -1
CDS - ZP_02638854.1 AC5_2711 putative pyridoxal kinase 80381 81223 -1
tRNA - - AC5_2712 tRNA-Lys 81358 81435 -1
tRNA - - AC5_2713 tRNA-Gly 81478 81553 -1
tRNA - - AC5_2714 tRNA-Gln 81617 81693 -1
tRNA - - AC5_2715 tRNA-Arg 81695 81773 -1
CDS - ZP_02638855.1 AC5_2716 hypothetical protein 81897 82589 -1
CDS - ZP_02638856.1 AC5_2717 conserved hypothetical protein 82779 83183 1
CDS - ZP_02638857.1 AC5_2718 lipase/acylhydrolase family protein 83242 84651 -1
tRNA - - AC5_2719 tRNA-Lys 84952 85029 -1
tRNA - - AC5_2720 tRNA-Gly 85047 85120 -1
tRNA - - AC5_2721 tRNA-Leu 85125 85210 -1
CDS thrS ZP_02638858.1 AC5_2722 threonyl-tRNA synthetase 85748 87679 1
CDS - ZP_02638859.1 AC5_2723 oligoendopeptidase, M3 family 88148 89842 -1
CDS - ZP_02638860.1 AC5_2724 5-formyltetrahydrofolate cyclo-ligase family protein 89938 90516 -1
CDS - ZP_02638861.1 AC5_2725 conserved hypothetical protein 90742 91554 -1
CDS - ZP_02638862.1 AC5_2726 hypothetical protein 91768 91938 -1
CDS glmS ZP_02638863.1 AC5_2727 glucosamine--fructose-6-phosphate aminotransferase, isomerizing 91958 93790 -1
CDS - ZP_02638864.1 AC5_2728 rubrerythrin family protein 94582 95106 1
CDS glmM ZP_02638865.1 AC5_2729 phosphoglucosamine mutase 95256 96602 -1
CDS - ZP_02638866.1 AC5_2730 conserved domain protein 97075 98367 1
CDS - ZP_02638867.2 AC5_2731 sensor histidine kinase 98628 99899 -1
CDS - ZP_02638868.1 AC5_2732 response regulator 100012 100704 -1
CDS - ZP_02638869.1 AC5_2733 conserved hypothetical protein 100873 101190 -1
CDS - ZP_02638870.1 AC5_2734 TrpR homolog YerC/YecD 101256 101555 -1
CDS - ZP_02638871.1 AC5_2735 conserved hypothetical protein 101695 102534 -1
CDS - ZP_02638872.1 AC5_2736 putative glycogen debranching enzyme, archaeal type 102651 104669 -1
CDS glgP ZP_02638873.1 AC5_2737 glycogen/starch/alpha-glucan phosphorylase 105028 107391 -1
CDS malQ ZP_02638874.1 AC5_2738 4-alpha-glucanotransferase 107384 108877 -1
CDS - ZP_02638875.1 AC5_2739 glycosyl hydrolase, family 31 108899 111046 -1
CDS - ZP_02638876.1 AC5_2740 transcriptional regulator, LacI family 111070 112083 -1
CDS - ZP_02638877.1 AC5_2741 putative maltose/maltodextrin ABC transporter, permease protein 112379 113272 -1
CDS - ZP_02638878.1 AC5_2742 putative maltose/maltodextrin ABC transporter, permease protein 113274 114227 -1
CDS - ZP_02638879.1 AC5_2743 putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein 114314 115540 -1
CDS - ZP_02638880.1 AC5_2744 conserved hypothetical protein 115998 116939 -1
CDS - ZP_02638881.1 AC5_2745 putative maltose/maltodextrin ABC transporter, ATP-binding protein 116974 118083 -1