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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02638904.1 AC5_0255 conserved hypothetical protein 504 1133 -1
tRNA - - AC5_0254 tRNA-Phe 1647 1724 -1
rRNA rrf - AC5_0253 5S ribosomal RNA 1735 1852 -1
rRNA rrl - AC5_0252 23S ribosomal RNA 1970 4948 -1
rRNA rrs - AC5_0250 16S ribosomal RNA 5061 6578 -1
CDS - ZP_02638905.1 AC5_0249 putative membrane protein 7141 7797 -1
CDS - ZP_02638906.1 AC5_0248 peptidase, M23/M37 family 8529 9683 1
CDS - ZP_02638907.1 AC5_0247 5'-nucleotidase, lipoprotein e(P4) family 9906 10769 1
CDS - ZP_02638908.2 AC5_0246 hypothetical protein 10973 11170 -1
CDS - ZP_02638909.1 AC5_0245 6-phospho-alpha-glucosidase 11716 13041 -1
CDS - ZP_02638910.1 AC5_0244 putative SIS domain 13301 13801 -1
CDS - ZP_02638911.1 AC5_0243 transcriptional regulator, RpiR family 14130 14900 -1
CDS - ZP_02638912.1 AC5_0242 pts system maltose-specific eiicb component 15155 16738 -1
CDS cbiO ZP_02638913.1 AC5_0241 cobalt ABC transporter, ATP-binding protein 17200 18057 -1
CDS cbiQ ZP_02638914.1 AC5_0240 cobalt ABC transporter, permease protein CbiQ 18072 18842 -1
CDS cbiN ZP_02638915.1 AC5_0239 cobalt transport protein 18826 19137 -1
CDS cbiM ZP_02638916.1 AC5_0238 cobalamin biosynthesis protein CbiM 19137 19880 -1
CDS nagH ZP_02638917.1 AC5_0237 hyaluronidase 20759 25645 -1
CDS - ZP_02638919.1 AC5_0235 transcriptional regulator, RpiR family 26497 27336 -1
CDS - ZP_02638920.1 AC5_0234 ROK family protein 27527 28414 -1
CDS - ZP_02638921.1 AC5_0233 conserved hypothetical protein subfamily 28570 29022 -1
CDS - ZP_02638922.1 AC5_0232 sodium/solute symporter family protein 29132 30649 -1
CDS nanA ZP_02638923.1 AC5_0231 N-acetylneuraminate lyase 30752 31618 -1
CDS nanE ZP_02638924.1 AC5_0230 N-acetylmannosamine-6-phosphate epimerase 31655 32320 -1
CDS - ZP_02638925.1 AC5_0229 nitroreductase family protein 32606 33274 -1
CDS - ZP_02638926.1 AC5_0228 ABC transporter, ATP-binding protein 33585 34610 1
CDS - ZP_02638927.1 AC5_0227 putative ABC transporter, permease protein 34613 35431 1
CDS - ZP_02638928.1 AC5_0226 conserved hypothetical protein 35436 36227 1
CDS - ZP_02638929.1 AC5_0225 putative esterase 36610 37584 -1
CDS luxS ZP_02638930.1 AC5_0224 autoinducer-2 production protein LuxS 37933 38388 -1
CDS - ZP_02638931.1 AC5_0223 cysteine synthase family protein 38473 39381 -1
CDS metC ZP_02638932.1 AC5_0222 cystathionine beta-lyase 39368 40522 -1
CDS - ZP_02638933.1 AC5_0221 methyltransferase, UbiE/COQ5 family 40586 41209 -1
CDS mscL ZP_02638934.1 AC5_0220 large conductance mechanosensitive channel protein 41952 42410 1
CDS colA ZP_02638935.1 AC5_0219 microbial collagenase 42558 45872 -1
CDS argR ZP_02638936.1 AC5_0218 arginine repressor 46414 46869 -1
CDS arcC ZP_02638937.1 AC5_0217 carbamate kinase 46942 47886 -1
CDS arcD ZP_02638938.1 AC5_0216 arginine/ornithine antiporter 47947 49383 -1
CDS argF ZP_02638939.1 AC5_0215 ornithine carbamoyltransferase 49528 50523 -1
CDS arcA ZP_02638940.1 AC5_0214 arginine deiminase 50631 51872 -1
CDS - ZP_02638941.1 AC5_0213 beta-galactosidase 52425 54494 -1
CDS - ZP_02638942.1 AC5_0212 amino acid permease family protein 54653 56140 -1
CDS - ZP_02638944.1 AC5_0211 conserved hypothetical protein 57202 57660 -1
CDS - ZP_02638945.1 AC5_0210 perfringolysin O 57856 59358 -1
CDS - ZP_02638946.1 AC5_0209 putative membrane protein 59951 60982 -1
CDS - ZP_02638947.1 AC5_0208 conserved hypothetical protein 61651 63117 1
CDS - ZP_02638949.1 AC5_0207 conserved hypothetical protein 63319 63870 -1
CDS - ZP_02638950.1 AC5_0206 conserved domain protein 63947 64603 -1
CDS - ZP_02638951.1 AC5_0205 putative membrane protein 64887 65564 -1
CDS - ZP_02638952.1 AC5_0204 conserved hypothetical protein 66039 66950 -1
CDS - ZP_02638953.2 AC5_0203 sortase family protein 67019 67867 -1
CDS - ZP_02638954.1 AC5_0202 putative surface protein 68402 69970 -1
CDS - ZP_02638955.1 AC5_0201 cell wall surface anchor family protein 69974 72145 -1
CDS - ZP_02638956.1 AC5_0200 beta-N-acetylglucosaminidase/beta-glucosidase 72775 74544 -1
CDS - ZP_02638957.1 AC5_0199 glucuronide permease 74604 75995 -1
CDS uxaC ZP_02638958.1 AC5_0198 glucuronate isomerase 76113 77513 -1
CDS uxuA ZP_02638959.1 AC5_0197 mannonate dehydratase 77533 78585 -1
CDS - ZP_02638960.1 AC5_0196 khg/kdpg aldolase 78676 79284 -1
CDS - ZP_02638961.1 AC5_0195 D-mannonate oxidoreductase 79299 80150 -1
CDS - ZP_02638962.1 AC5_0194 probable transcriptional regulator 80340 81029 -1
CDS - ZP_02638963.1 AC5_0193 beta-glucuronidase 81172 82971 -1
CDS - ZP_02638964.1 AC5_0192 2-keto-3-deoxygluconate kinase 83035 84060 -1
CDS - ZP_02638965.1 AC5_0191 glucuronate isomerase 84089 84934 -1
CDS - ZP_02638966.1 AC5_0190 RNA 2'-phosphotransferase 85224 85775 -1
CDS - ZP_02638969.1 AC5_0188 conserved hypothetical protein 86983 87144 1
CDS - ZP_02638970.1 AC5_0187 conserved hypothetical protein 87164 88933 -1
CDS - ZP_02638971.1 AC5_0186 transposase, family 89211 89681 -1
CDS - ZP_02638972.1 AC5_0185 conserved hypothetical protein 90032 90832 -1
CDS - ZP_02638973.1 AC5_0184 site-specific recombinase, resolvase family 91153 92706 -1
CDS - ZP_02638974.1 AC5_0183 hypothetical protein 92706 92897 -1
CDS - ZP_02638975.1 AC5_0182 acetyltransferase, gnat family 93079 93765 -1
CDS - ZP_02638976.2 AC5_0181 hypothetical protein 93777 93923 -1
CDS - ZP_02638977.1 AC5_0180 putative caudovirus prohead protease 94268 95050 -1
CDS - ZP_02638978.1 AC5_0179 putative DNA double-strand break repair Rad50 ATPase 95056 95715 -1
CDS - ZP_02638979.1 AC5_0178 putative DNA-directed RNA polymerase subunit N 95741 96079 -1
CDS - ZP_02638980.1 AC5_0177 hypothetical protein 96080 96496 -1
CDS - ZP_02638981.1 AC5_0176 hypothetical protein 96517 96729 -1
CDS - ZP_02638982.1 AC5_0175 hypothetical protein 98031 98153 -1
CDS - ZP_02638983.1 AC5_0174 type III restriction enzyme, res subunit family 98883 100331 -1
CDS - ZP_02638984.1 AC5_0173 hypothetical protein 100324 100497 -1
CDS - ZP_02638985.1 AC5_0172 hypothetical protein 100869 101309 -1
CDS - ZP_02638986.1 AC5_0171 hypothetical protein 101515 102711 -1
CDS - ZP_02638988.1 AC5_0170 tetratricopeptide repeat domain protein 103099 104364 -1
CDS - ZP_02638990.1 AC5_0169 conserved hypothetical protein 104627 105463 -1
CDS - ZP_02638991.1 AC5_0168 conserved crenarchaeal protein 105617 105790 1
CDS - ZP_02638992.1 AC5_0167 ATPase component of ABC transporter 106044 107600 -1
CDS - ZP_02638993.1 AC5_0166 hypothetical protein 107868 107993 -1
CDS - ZP_02638995.1 AC5_0165 conserved hypothetical protein 108456 109001 1
CDS rbr ZP_02638996.1 AC5_0164 rubrerythrin 109164 109751 -1
CDS - ZP_02638997.2 AC5_0163 transposase, IS605 OrfB family 110327 111553 1
CDS - ZP_02638998.1 AC5_0161 CAAX amino terminal protease family protein 112173 113099 -1
CDS - ZP_02638999.1 AC5_0160 cinA family protein 113742 114980 -1
CDS - ZP_02639000.1 AC5_0159 putative membrane protein 115309 116202 1
CDS - ZP_02639001.1 AC5_0158 hypothetical protein 116558 116710 -1
CDS - ZP_02639002.1 AC5_0157 putative membrane protein 116911 117930 -1
CDS - ZP_02639003.1 AC5_0156 C4-dicarboxylate transporter family protein 118444 119460 -1
CDS - ZP_02639004.1 AC5_0155 conserved hypothetical protein 119704 120030 -1
CDS - ZP_02639005.1 AC5_0154 conserved hypothetical protein 120325 120537 -1
CDS - ZP_02639006.1 AC5_0153 putative membrane protein 120629 121198 1
CDS - ZP_02639007.1 AC5_0152 putative ABC transporter, permease protein 121367 123394 -1