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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - AC5_2643 tRNA-Gln 1 72 1
tRNA - - AC5_2642 tRNA-Lys 78 155 1
tRNA - - AC5_2641 tRNA-Lys 173 250 1
tRNA - - AC5_2640 tRNA-Leu 259 344 1
tRNA - - AC5_2639 tRNA-Gly 370 444 1
tRNA - - AC5_2638 tRNA-Gly 449 522 1
tRNA - - AC5_2637 tRNA-Arg 597 675 1
tRNA - - AC5_2636 tRNA-Pro 679 756 1
tRNA - - AC5_2635 tRNA-Gly 760 833 1
tRNA - - AC5_2634 tRNA-Arg 868 946 1
tRNA - - AC5_2633 tRNA-His 949 1026 1
tRNA - - AC5_2632 tRNA-Gln 1030 1106 1
tRNA - - AC5_2631 tRNA-Lys 1112 1189 1
tRNA - - AC5_2630 tRNA-Leu 1198 1283 1
tRNA - - AC5_2629 tRNA-Gly 1306 1380 1
tRNA - - AC5_2628 tRNA-Gly 1384 1457 1
tRNA - - AC5_2627 tRNA-Arg 1508 1584 1
CDS - ZP_02639254.1 AC5_2626 phage integrase 1681 2883 -1
CDS - ZP_02900248.1 AC5_2625 hypothetical protein 2989 3111 1
CDS - ZP_02639255.1 AC5_2624 conserved hypothetical protein 4336 4497 -1
CDS - ZP_02639256.2 AC5_2623 phage protein 4667 5122 -1
CDS - ZP_02639257.1 AC5_2622 putative DNA-binding protein 5136 6008 -1
CDS - ZP_02639258.1 AC5_2621 transcriptional regulator 6175 6384 1
CDS - ZP_02639259.1 AC5_2620 hypothetical protein 6594 6818 1
CDS - ZP_02639261.1 AC5_2619 hypothetical protein 6972 7784 1
CDS - ZP_02639262.1 AC5_2618 replicative DNA helicase 7801 9102 1
CDS - ZP_02639264.1 AC5_2617 hypothetical protein 9514 9714 1
CDS - ZP_02639265.1 AC5_2616 hypothetical protein 9707 9850 1
CDS - ZP_02639266.1 AC5_2615 filamentation induced by cAMP protein Fic 10230 11387 1
CDS - ZP_02639267.1 AC5_2614 conserved domain protein 11571 11705 1
CDS - ZP_02639268.1 AC5_2613 hypothetical protein 11801 12313 1
CDS - ZP_02639269.1 AC5_2612 hypothetical protein 12573 13244 1
CDS - ZP_02639270.1 AC5_2611 RNA polymerase sigma factor RpoD 13237 13920 1
CDS - ZP_02639271.1 AC5_2610 hypothetical protein 13957 14313 1
CDS - ZP_02639272.1 AC5_2609 hypothetical protein 14358 15041 1
CDS - ZP_02639273.1 AC5_2608 possible sigma factor 15100 15495 1
CDS - ZP_02639274.1 AC5_2607 putative RloA 15637 16839 1
CDS - ZP_02639275.1 AC5_2606 hypothetical protein 16832 17494 1
CDS pepD ZP_02639276.1 AC5_2605 aminoacyl-histidine dipeptidase 17927 19378 1
CDS - ZP_02639277.1 AC5_2604 hypothetical protein 19565 19726 -1
CDS - ZP_02639278.1 AC5_2603 putative lipoprotein 19710 20423 -1
CDS - ZP_02639279.1 AC5_2602 chromate transport protein 20863 21414 1
CDS - ZP_02639280.1 AC5_2601 chromate transport protein 21401 21970 1
rRNA rrs - AC5_2600 16S ribosomal RNA 22447 23984 1
tRNA - - AC5_2599 tRNA-Ala 24123 24200 1
tRNA - - AC5_2598 tRNA-Ile 24204 24282 1
rRNA rrl - AC5_2596 23S ribosomal RNA 24382 27285 1
tRNA - - AC5_2595 tRNA-Asn 27339 27415 1
CDS - ZP_02639281.1 AC5_2594 DNA-binding response regulator 27735 28418 1
CDS - ZP_02639282.1 AC5_2593 sensor histidine kinase 28599 30014 1
CDS - ZP_02639283.1 AC5_2592 putative lipoprotein 30031 31554 1
CDS - ZP_02639284.1 AC5_2591 sulfatase 31690 33579 -1
CDS - ZP_02639285.1 AC5_2590 conserved hypothetical protein 33761 34333 1
CDS - ZP_02639286.1 AC5_2589 oxidoreductase, pyridine nucleotide-disulphide family 34365 35327 1
CDS - ZP_02639287.2 AC5_2588 putative acyl-CoA thioesterase 35464 36024 -1
CDS - ZP_02639288.1 AC5_2587 endodeoxyribonuclease, RusA family protein 36033 36665 -1
CDS gcp ZP_02639289.1 AC5_2586 O-sialoglycoprotein endopeptidase 36807 37826 1
CDS - ZP_02639290.1 AC5_2585 hydrolase, alpha/beta fold family 37841 38860 1
CDS - ZP_02639291.1 AC5_2584 serine protease 38977 40356 1
CDS - ZP_02639292.1 AC5_2583 PTS system, lactose/cellobiose-specific IIB component 40589 40918 1
CDS - ZP_02639293.1 AC5_2582 putative ethanolamine utilization protein EutH 41081 42205 1
CDS - ZP_02639294.1 AC5_2581 ApbE family protein 42329 43357 -1
CDS - ZP_02639295.1 AC5_2580 putative lipoprotein 43392 43835 -1
CDS - ZP_02639296.1 AC5_2579 conserved hypothetical protein 43976 44347 1
CDS - ZP_02639297.1 AC5_2578 conserved hypothetical protein 44540 45070 1
CDS - ZP_02639298.1 AC5_2577 putative mannosyltransferase 45304 46449 -1
CDS - ZP_02639299.1 AC5_2576 putative spore coat protein 46578 47585 1
CDS - ZP_02639300.1 AC5_2575 conserved hypothetical protein 47593 48276 1
CDS - ZP_02639301.1 AC5_2574 putative spore coat protein 48292 49320 1
CDS mtfB ZP_02639302.1 AC5_2573 mannosyltransferase B 49502 50629 -1
CDS cotS ZP_02639303.1 AC5_2572 spore coat protein CotS 50738 51742 1
CDS - ZP_02639304.1 AC5_2571 peptidase family protein 51946 52833 1
CDS - ZP_02639305.1 AC5_2570 conserved hypothetical protein 52996 53232 1
CDS - ZP_02639306.1 AC5_2569 lysM domain protein 53592 55154 1
CDS cphB ZP_02639307.1 AC5_2568 cyanophycinase 55255 56082 1
CDS cphA ZP_02639308.1 AC5_2567 cyanophycin synthetase 56069 58693 1
CDS ispE ZP_02639309.2 AC5_2566 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 58835 59695 1
CDS - ZP_02639310.1 AC5_2565 stage II sporulation protein R 59765 60394 1
CDS - ZP_02639311.1 AC5_2564 thiamin biosynthesis protein ThiI 60440 61420 1
CDS - ZP_02639312.1 AC5_2563 conserved hypothetical protein 61443 61862 1
CDS pyrG ZP_02639313.1 AC5_2562 CTP synthase 62203 63810 1
CDS rho ZP_02639314.1 AC5_2561 transcription termination factor Rho 64076 65536 1
CDS - ZP_02639315.1 AC5_2560 putative monogalactosyldiacylglycerol synthase 65579 66703 -1
CDS rpmE ZP_02639316.1 AC5_2559 ribosomal protein L31 66812 67018 -1
CDS tdk ZP_02639317.1 AC5_2558 thymidine kinase 67174 67773 1
CDS hemK ZP_02639318.1 AC5_2557 protein- methyltransferase, release factor-specific 67799 69562 1
CDS prfA ZP_02639319.1 AC5_2556 peptide chain release factor 1 69619 70701 1
CDS - ZP_02639320.1 AC5_2555 conserved hypothetical protein 70780 71370 1
CDS - ZP_02639321.1 AC5_2554 Sua5/YciO/YrdC/YwlC family protein 71393 72445 1
CDS rpiB ZP_02639323.1 AC5_2553 ribose 5-phosphate isomerase B 72709 73158 1
CDS upp ZP_02639324.1 AC5_2552 uracil phosphoribosyltransferase 73203 73832 1
CDS mnaA ZP_02639325.1 AC5_2551 UDP-N-acetylglucosamine 2-epimerase 73896 75050 1
CDS - ZP_02639326.1 AC5_2550 acetyl-CoA acetyltransferase 75318 76496 1
CDS atpB ZP_02639328.1 AC5_2548 ATP synthase F0, A subunit 77600 78274 1
CDS atpE ZP_02639329.1 AC5_2547 ATP synthase F0, C subunit 78335 78553 1
CDS atpF ZP_02639330.1 AC5_2546 ATP synthase F0, B subunit 78653 79132 1
CDS atpH ZP_02639331.1 AC5_2545 ATP synthase F1, delta subunit 79135 79674 1
CDS atpA ZP_02639332.1 AC5_2544 ATP synthase F1, alpha subunit 79685 81193 1
CDS atpG ZP_02639333.1 AC5_2543 ATP synthase F1, gamma subunit 81258 82109 1
CDS atpD ZP_02639334.1 AC5_2542 ATP synthase F1, beta subunit 82123 83520 1