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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - AC5_0088 tRNA-Lys 2 79 -1
rRNA rrf - AC5_0087 5S ribosomal RNA 84 274 -1
rRNA rrf - AC5_0086 5S ribosomal RNA 156 3157 -1
rRNA rrs - AC5_0084 16S ribosomal RNA 3343 4948 -1
CDS - ZP_02639602.1 AC5_0083 deoxyguanosine kinase/deoxyadenosine kinase 5404 6087 -1
CDS - ZP_02639603.1 AC5_0082 acetyltransferase, GNAT family 6107 7045 -1
CDS - ZP_02639604.1 AC5_0081 major facilitator family transporter 7070 8236 -1
CDS - ZP_02639605.1 AC5_0080 HesA/MoeB/ThiF family protein 8527 9288 -1
CDS mtnN ZP_02639606.1 AC5_0079 MTA/SAH nucleosidase 9665 10360 1
CDS - ZP_02639607.1 AC5_0078 conserved hypothetical protein 10416 11672 -1
CDS - ZP_02639608.1 AC5_0077 putative D-3-phosphoglycerate dehydrogenase 11819 12724 -1
CDS - ZP_02639609.1 AC5_0076 aminotransferase, class V 12793 13869 -1
CDS - ZP_02639610.1 AC5_0075 hypothetical protein 14033 14215 -1
CDS - ZP_02639611.1 AC5_0074 hypothetical protein 14284 14463 -1
CDS - ZP_02639612.1 AC5_0073 putative membrane protein 14626 15756 -1
CDS bofA ZP_02639613.1 AC5_0072 sigma-K factor processing regulatory protein BofA 16032 16310 -1
CDS - ZP_02639614.1 AC5_0071 conserved hypothetical protein 16326 16604 -1
CDS recR ZP_02639615.1 AC5_0070 recombination protein RecR 16830 17426 -1
CDS - ZP_02639616.1 AC5_0069 conserved hypothetical protein TIGR00103 17524 17862 -1
CDS dnaX ZP_02639617.1 AC5_0068 DNA polymerase III, gamma and tau subunit 17974 19617 -1
CDS folA ZP_02639618.2 AC5_0067 dihydrofolate reductase 19808 20293 1
CDS - ZP_02639619.1 AC5_0065 hypothetical protein 20338 20451 1
CDS brnQ ZP_02639620.1 AC5_0066 branched-chain amino acid transport system II carrier protein 20448 21734 -1
CDS - ZP_02639621.1 AC5_0064 putative lipoprotein 22180 22683 -1
tRNA - - AC5_0063 tRNA-Ser 23115 23206 -1
CDS lgt ZP_02639622.1 AC5_0062 prolipoprotein diacylglyceryl transferase 23456 24244 -1
CDS - ZP_02639623.1 AC5_0061 conserved hypothetical protein 24510 25229 -1
CDS - ZP_02639624.1 AC5_0060 putative permease 25242 26135 -1
CDS - ZP_02639625.1 AC5_0059 conserved hypothetical protein 26138 26722 -1
CDS - ZP_02639626.1 AC5_0058 CobW/P47K family protein 26742 27668 -1
CDS plc ZP_02639627.1 AC5_0057 phospholipase C 27856 29052 -1
CDS - ZP_02639628.2 AC5_0056 conserved hypothetical protein 29383 30855 1
CDS - ZP_02639629.1 AC5_0055 conserved hypothetical protein 30953 31615 -1
CDS - ZP_02639630.1 AC5_0054 conserved hypothetical protein 31725 32090 -1
CDS - ZP_02639631.1 AC5_0053 hypothetical protein 32213 32671 -1
CDS - ZP_02639632.1 AC5_0052 cytidine/deoxycytidylate deaminase family protein 32734 33165 -1
CDS - ZP_02639633.1 AC5_0051 putative transporter 33168 34433 -1
CDS - ZP_02639634.1 AC5_0050 death-on-curing family protein 34752 35195 -1
CDS - ZP_02639635.1 AC5_0049 ciab protein 35198 36211 -1
CDS - ZP_02639636.1 AC5_0048 conserved hypothetical protein 36240 36653 -1
CDS - ZP_02639637.2 AC5_0047 hypothetical protein 36700 37062 -1
CDS - ZP_02639639.1 AC5_0045 hypothetical protein 38401 38979 -1
CDS - ZP_02639640.1 AC5_0044 hypothetical protein 38985 39113 -1
CDS - ZP_02639641.1 AC5_0043 hypothetical protein 39296 39469 -1
CDS - ZP_02639642.1 AC5_0042 hypothetical protein 39548 39691 -1
CDS - ZP_02639643.1 AC5_0041 hypothetical protein 39684 39884 -1
CDS - ZP_02639644.2 AC5_0040 hypothetical protein 40165 40284 -1
CDS - ZP_02639645.1 AC5_0039 replicative DNA helicase 40303 41598 -1
CDS - ZP_02639646.1 AC5_0038 Gp34 protein 41615 42391 -1
CDS - ZP_02639648.1 AC5_0037 conserved hypothetical protein 42521 42814 -1
CDS - ZP_02639649.1 AC5_0036 HTH-type transcriptional regulator HipB 43010 43204 -1
CDS - ZP_02639650.1 AC5_0035 helix-turn-helix domain protein 43331 43945 1
CDS - ZP_02639651.1 AC5_0034 conserved hypothetical protein 44176 44337 1
CDS - ZP_02639652.1 AC5_0033 prophage LambdaBa04, site-specific recombinase, phage integrase family 45011 46117 1
tRNA - - AC5_0032 tRNA-Arg 46234 46308 -1
CDS - ZP_02639653.1 AC5_0031 transcriptional regulator, TetR family 46363 46932 -1
CDS psd ZP_02639654.1 AC5_0030 phosphatidylserine decarboxylase 47095 47979 1
CDS - ZP_02639655.1 AC5_0029 hypothetical protein 48303 49442 -1
CDS - ZP_02639656.1 AC5_0028 group-specific protein 49577 50167 -1
tRNA - - AC5_0027 tRNA-Arg 50346 50424 -1
CDS - ZP_02639657.1 AC5_0026 degV family protein 50613 51488 1
CDS pepT ZP_02639658.1 AC5_0025 peptidase T 51594 52814 -1
CDS - ZP_02639659.1 AC5_0024 ErfK/YbiS/YcfS/YnhG family protein 53006 54166 1
CDS yhaM ZP_02639660.1 AC5_0023 3'-5' exoribonuclease YhaM 54198 55190 -1
CDS - ZP_02639661.1 AC5_0022 polyA polymerase family protein 55306 56574 1
CDS addA ZP_02639662.1 AC5_0021 ATP-dependent nuclease, subunit A 56613 60428 -1
CDS addB ZP_02639663.1 AC5_0020 ATP-dependent nuclease, subunit B 60418 63894 -1
CDS - ZP_02639664.1 AC5_0019 hypothetical protein 64103 64267 1
CDS - ZP_02639665.1 AC5_0018 conserved hypothetical protein 64356 65237 -1
CDS - ZP_02639666.1 AC5_0017 hypothetical protein 65475 65657 1
tRNA - - AC5_0016 tRNA-Ser 65691 65783 -1
tRNA - - AC5_0015 tRNA-Ser 65787 65879 -1
CDS - ZP_02639667.1 AC5_0014 hypothetical protein 65987 66253 -1
tRNA - - AC5_0013 tRNA-Ser 66511 66603 -1
tRNA - - AC5_0012 tRNA-Ser 66634 66726 -1
CDS - ZP_02639668.1 AC5_0011 hypothetical protein 66867 67277 -1
CDS serS ZP_02639669.1 AC5_0010 seryl-tRNA synthetase 67456 68733 -1
CDS - ZP_02639670.1 AC5_0009 conserved hypothetical protein 69085 69318 -1
CDS - ZP_02639671.1 AC5_0008 FAD-dependent oxidoreductase 69331 70725 -1
CDS - ZP_02639672.1 AC5_0007 putative membrane protein 70968 73724 -1
CDS - ZP_02639673.1 AC5_0006 conserved hypothetical protein 74133 74636 -1
tRNA - - AC5_0005 tRNA-Ala 74908 74985 -1
tRNA - - AC5_0004 tRNA-Met 74989 75067 -1
rRNA rrf - AC5_0003 5S ribosomal RNA 75072 75190 -1
rRNA rrl - AC5_0002 23S ribosomal RNA 75285 78189 -1