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Clostridium perfringens CPE str. F4969, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rimM ZP_02639812.1 AC5_2072 16S rRNA processing protein RimM 821 1318 -1
CDS - ZP_02639813.1 AC5_2073 conserved hypothetical protein 1374 1601 -1
CDS rpsP ZP_02639814.1 AC5_2074 ribosomal protein S16 1645 1890 -1
CDS ffh ZP_02639815.1 AC5_2075 signal recognition particle protein 1924 3282 -1
CDS - ZP_02639816.1 AC5_2076 DNA-binding protein 3294 3632 -1
CDS ftsY ZP_02639817.1 AC5_2077 signal recognition particle-docking protein FtsY 3807 4721 -1
CDS smc ZP_02639818.1 AC5_2078 chromosome segregation protein SMC 4735 8292 -1
CDS - ZP_02639819.1 AC5_2079 radical SAM domain protein 8497 9570 -1
CDS rnc ZP_02639820.1 AC5_2080 ribonuclease III 9549 10262 -1
CDS acpP ZP_02639821.1 AC5_2081 acyl carrier protein 10361 10591 -1
CDS plsX ZP_02639822.1 AC5_2082 fatty acid/phospholipid synthesis protein PlsX 10668 11687 -1
CDS rpmF ZP_02639823.1 AC5_2083 ribosomal protein L32 11744 11926 -1
CDS - ZP_02639824.1 AC5_2084 conserved hypothetical protein 11942 12436 -1
CDS ackA ZP_02639825.1 AC5_2085 acetate kinase 12556 13752 -1
CDS pta ZP_02639826.1 AC5_2086 phosphate acetyltransferase 13843 14844 -1
CDS - ZP_02639827.1 AC5_2087 conserved hypothetical protein 15079 16287 1
CDS ylbJ ZP_02639828.1 AC5_2089 sporulation integral membrane protein YlbJ 16352 17512 1
CDS - ZP_02639829.1 AC5_2088 conserved hypothetical protein 17495 18025 -1
CDS coaD ZP_02639830.1 AC5_2090 pantetheine-phosphate adenylyltransferase 18034 18528 -1
CDS - ZP_02639831.1 AC5_2091 putative methyltransferase 18530 19087 -1
CDS recG ZP_02639832.1 AC5_2092 ATP-dependent DNA helicase RecG 19152 21224 -1
CDS - ZP_02639833.1 AC5_2093 DAK2 domain protein 21377 23023 -1
CDS - ZP_02639834.1 AC5_2094 conserved hypothetical protein 23037 23384 -1
CDS rpmB ZP_02639835.1 AC5_2095 ribosomal protein L28 23644 23835 1
CDS - ZP_02639837.1 AC5_2096 thiamine pyrophosphokinase 24078 24707 -1
CDS rpe ZP_02639838.1 AC5_2097 ribulose-phosphate 3-epimerase 24709 25362 -1
CDS rsgA ZP_02639839.1 AC5_2098 ribosome small subunit-dependent GTPase A 25362 26225 -1
CDS - ZP_02639840.1 AC5_2099 protein kinase 26462 28519 -1
CDS - ZP_02639841.1 AC5_2100 protein phosphatase 2C family protein 28521 29240 -1
CDS - ZP_02639842.1 AC5_2101 radical SAM enzyme, Cfr family 29253 30296 -1
CDS sun ZP_02639843.1 AC5_2102 ribosomal RNA small subunit methyltransferase B 30328 31656 -1
CDS - ZP_02639844.1 AC5_2103 putative neutral zinc metallopeptidase 31667 32362 -1
CDS fmt ZP_02639845.1 AC5_2104 methionyl-tRNA formyltransferase 32380 33309 -1
CDS def ZP_02639846.1 AC5_2105 polypeptide deformylase 33329 33772 -1
CDS priA ZP_02639847.1 AC5_2106 primosomal protein N' 33786 35981 -1
CDS coaBC ZP_02639848.1 AC5_2107 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 36020 37207 -1
CDS rpoZ ZP_02639849.1 AC5_2108 DNA-directed RNA polymerase, omega subunit 37213 37425 -1
CDS gmk ZP_02639850.2 AC5_2109 guanylate kinase 37406 38053 -1
CDS - ZP_02639851.1 AC5_2110 conserved hypothetical protein 38046 38315 -1
CDS - ZP_02639852.1 AC5_2111 conserved hypothetical protein TIGR00255 38329 39213 -1
CDS - ZP_02639853.1 AC5_2112 xanthine/uracil permease family protein 39433 40830 -1
CDS - ZP_02639854.1 AC5_2113 L-asparaginase 41088 42071 -1
CDS spoIVA ZP_02639855.1 AC5_2114 stage IV sporulation protein A 42422 43897 -1
CDS - ZP_02639856.1 AC5_2115 NAD-dependent glycerol-3-phosphate dehydrogenase family protein 44226 45221 -1
CDS - ZP_02639857.1 AC5_2116 putative GTP-binding protein Era 45226 46542 -1
CDS - ZP_02639858.1 AC5_2117 conserved hypothetical protein 46545 47882 -1
CDS - ZP_02639859.1 AC5_2118 sensory box histidine kinase 48209 49924 -1
CDS - ZP_02639860.1 AC5_2119 conserved hypothetical protein 49938 50642 -1
CDS nrdR ZP_02639861.2 AC5_2120 transcriptional regulator NrdR 50808 51269 -1
CDS - ZP_02639862.1 AC5_2121 PRC-barrel domain protein 51319 51591 -1
CDS sigG ZP_02639863.1 AC5_2122 RNA polymerase sigma-G factor 51732 52505 -1
CDS sigE ZP_02639864.1 AC5_2123 RNA polymerase sigma-E factor 52580 53287 -1
CDS spoIIGA ZP_02639865.2 AC5_2124 Sporulation factor SpoIIGA 53301 53966 -1
CDS - ZP_02639866.2 AC5_2125 hypothetical protein 54145 54264 -1
CDS ftsZ ZP_02639867.1 AC5_2126 cell division protein FtsZ 54512 55657 -1
CDS ftsA ZP_02639868.1 AC5_2127 cell division protein FtsA 55671 56909 -1
CDS pilT ZP_02639869.1 AC5_2128 twitching motility protein PilT 56987 58039 -1
CDS - ZP_02639870.1 AC5_2129 RNA polymerase sigma-70 factor family 58219 58920 -1
CDS - ZP_02639871.1 AC5_2130 putative penicillin-binding protein 58983 60650 -1
CDS udk ZP_02639872.1 AC5_2131 uridine kinase 60763 61389 -1
CDS - ZP_02639873.1 AC5_2132 peptidase, U32 family 61389 62618 -1
CDS - ZP_02639874.1 AC5_2133 O-methyltransferase family protein 62624 63268 -1
CDS - ZP_02639875.1 AC5_2134 conserved hypothetical protein TIGR00247 63284 64312 -1
CDS typA ZP_02639876.1 AC5_2135 GTP-binding protein TypA 64455 66287 -1
CDS - ZP_02639877.1 AC5_2136 RNA-metabolising metallo-beta-lactamase family protein 66444 68111 -1
CDS - ZP_02639878.1 AC5_2137 transcriptional regulator, Fur family 68182 68634 -1
CDS - ZP_02639879.1 AC5_2138 conserved hypothetical protein 68655 68909 -1
CDS - ZP_02639880.1 AC5_2139 conserved hypothetical protein TIGR00250 68925 69338 -1
CDS - ZP_02639881.1 AC5_2140 conserved hypothetical protein 69386 69643 -1
CDS alaS ZP_02639882.1 AC5_2141 alanyl-tRNA synthetase 69787 72426 -1
CDS - ZP_02639883.1 AC5_2142 putative domain of unknown function 73018 74055 -1
CDS - ZP_02639884.1 AC5_2143 PRC-barrel domain protein 74081 74554 -1
CDS trmU ZP_02639885.1 AC5_2144 tRNA -methyltransferase 74835 75914 -1
CDS nifU ZP_02639886.1 AC5_2145 FeS cluster assembly scaffold protein NifU 75939 76367 -1