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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02631086.1 AC3_2864 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 318 932 -1
CDS rph ZP_02631087.1 AC3_2865 ribonuclease PH 934 1680 -1
CDS - ZP_02631088.1 AC3_2866 conserved hypothetical protein 1902 3605 1
CDS - ZP_02631089.1 AC3_2867 bacterial extracellular solute-binding protein, family 5 3808 5328 -1
CDS - ZP_02631090.1 AC3_2868 hypothetical protein 5523 5987 -1
CDS - ZP_02631091.1 AC3_2869 conserved hypothetical protein 6111 6434 1
CDS ligA ZP_02631092.1 AC3_2870 DNA ligase, NAD-dependent 6471 8459 -1
CDS pcrA ZP_02631093.1 AC3_2871 ATP-dependent DNA helicase PcrA 8497 10752 -1
CDS - ZP_02631094.1 AC3_2872 hypothetical protein 10964 11752 -1
CDS - ZP_02631095.1 AC3_2873 hypothetical protein 11769 12317 -1
CDS - ZP_02631096.1 AC3_2874 gram positive anchor protein 12319 12990 -1
CDS - ZP_02631097.1 AC3_2875 RNA pseudouridine synthase family protein 13543 14262 -1
CDS - ZP_02631098.1 AC3_2876 two component regulator three Y motif protein 14640 16700 -1
CDS - ZP_02631099.1 AC3_2877 YaiI/YqxD family protein 17073 17522 -1
CDS pgi ZP_02631100.1 AC3_2878 glucose-6-phosphate isomerase 17720 19072 -1
CDS - ZP_02631101.1 AC3_2879 conserved hypothetical protein 19102 19311 -1
CDS - ZP_02631102.1 AC3_2880 oligopeptide/dipeptide ABC transporter, ATP-binding protein 19513 20481 -1
CDS - ZP_02631103.1 AC3_2881 oligopeptide/dipeptide ABC transporter, ATP-binding protein 20482 21459 -1
CDS - ZP_02631104.1 AC3_2882 oligopeptide/dipeptide ABC transporter, permease protein 21473 22387 -1
CDS - ZP_02631105.1 AC3_2883 oligopeptide/dipeptide ABC transporter, permease protein 22402 23367 -1
CDS - ZP_02631106.1 AC3_2884 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein 23442 25184 -1
CDS - ZP_02631107.1 AC3_2885 major facilitator family transporter 25814 27106 1
CDS guaA ZP_02631108.1 AC3_2886 GMP synthase 27475 29004 -1
CDS guaB ZP_02631109.1 AC3_2887 inosine-5'-monophosphate dehydrogenase 29110 30564 -1
CDS - ZP_02631110.1 AC3_2888 hypothetical protein 31272 33893 -1
CDS - ZP_02631112.1 AC3_2891 hypothetical protein 34504 36612 -1
CDS - ZP_02631113.1 AC3_2892 hypothetical protein 36617 37618 -1
CDS - ZP_02631114.1 AC3_2893 hypothetical protein 37639 38856 -1
CDS - ZP_02631115.1 AC3_2894 type IV pilus biogenesis protein PilN 38846 39412 -1
CDS - ZP_02631116.1 AC3_2895 type IV pilus assembly protein PilM 39427 40581 -1
CDS - ZP_02631117.1 AC3_2896 prepilin peptidase-dependent 40670 41143 -1
CDS - ZP_02631118.1 AC3_2897 prepilin peptidase-dependent 41159 41632 -1
CDS - ZP_02631119.1 AC3_2898 prepilin peptidase-dependent 41695 42147 -1
CDS - ZP_02631121.1 AC3_2900 secretion system protein E 43404 45092 -1
CDS - ZP_02631122.1 AC3_2901 Type IV leader peptidase family protein 45162 45905 -1
CDS - ZP_02631123.1 AC3_2902 putative type IV pilin 46181 46603 -1
CDS groEL ZP_02631124.1 AC3_2903 chaperonin, 60 kDa 47269 48888 -1
CDS groS ZP_02631125.1 AC3_2904 chaperonin, 10 kDa 48943 49227 -1
CDS - ZP_02631126.1 AC3_2905 integral membrane protein TIGR01906 49598 50248 1
CDS - ZP_02631127.1 AC3_2906 conserved hypothetical protein 50397 50702 1
CDS - ZP_02631128.2 AC3_2907 putative 8-oxoguanine DNA glycosylase 50824 51762 -1
CDS - ZP_02631129.1 AC3_2908 conserved hypothetical protein 51772 52176 -1
CDS - ZP_02631130.2 AC3_2909 signal peptidase I 52420 52920 -1
CDS - ZP_02631131.1 AC3_2910 ABC transporter, ATP-binding protein/permease protein 53062 54762 -1
CDS hbd ZP_02631132.1 AC3_2911 3-hydroxybutyryl-CoA dehydrogenase 55022 55870 -1
CDS - ZP_02631133.1 AC3_2912 electron transfer flavoprotein, alpha subunit/FixB family protein 55984 56991 -1
CDS - ZP_02631134.1 AC3_2913 electron transfer flavoprotein, beta subunit/FixA family protein 57013 57792 -1
CDS bcd ZP_02631135.1 AC3_2914 butyryl-CoA dehydrogenase 57811 58950 -1
CDS - ZP_02631136.1 AC3_2916 DNA-binding protein 60042 60680 -1
CDS cadA ZP_02631137.1 AC3_2917 cadmium-translocating P-type ATPase 61146 63362 -1
CDS - ZP_02631138.1 AC3_2918 putative cadmium resistance transcriptional regulator CadC 63378 63737 -1
CDS - ZP_02631139.1 AC3_2919 transcriptional regulator, GntR family 63872 64492 -1
CDS - ZP_02631140.1 AC3_2920 conserved hypothetical protein 64580 65158 -1
CDS - ZP_02631141.1 AC3_2921 hypothetical protein 65548 66114 -1
CDS - ZP_02631142.1 AC3_2922 mannose-1-phosphate guanylyltransferase 66343 67413 -1
CDS - ZP_02631143.1 AC3_2923 glycosyl hydrolase, family 1 67651 69030 -1
CDS - ZP_02631144.1 AC3_2924 aldehyde dehydrogenase family protein 69727 71103 -1
CDS - ZP_02631145.1 AC3_2925 conserved hypothetical protein 71253 71963 -1
CDS - ZP_02631146.1 AC3_2926 conserved hypothetical protein 72072 73013 1
CDS - ZP_02631147.1 AC3_2927 RNA pseudouridine synthase family protein 73255 74160 -1
CDS - ZP_02631148.1 AC3_2928 conserved hypothetical protein 74182 75195 -1
CDS - ZP_02631149.1 AC3_2929 sortase family protein 75256 75933 -1
CDS ispF ZP_02631150.1 AC3_2930 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 76283 76753 1
CDS - ZP_02631151.1 AC3_2931 Na+/H+ antiporter family protein 76930 78243 -1
CDS - ZP_02631152.1 AC3_2932 putative pyridoxal kinase 78580 79422 -1
tRNA - - AC3_2933 tRNA-Lys 79556 79633 -1
tRNA - - AC3_2934 tRNA-Gly 79676 79751 -1
tRNA - - AC3_2935 tRNA-Gln 79815 79891 -1
tRNA - - AC3_2936 tRNA-Arg 79893 79971 -1
CDS - ZP_02631153.1 AC3_2937 hypothetical protein 80096 80788 -1
CDS - ZP_02631154.1 AC3_2938 conserved hypothetical protein 80978 81382 1
CDS - ZP_02631155.1 AC3_2939 lipase/acylhydrolase family protein 81441 82850 -1
tRNA - - AC3_2940 tRNA-Lys 83150 83227 -1
tRNA - - AC3_2941 tRNA-Gly 83246 83319 -1
tRNA - - AC3_2942 tRNA-Gly 83325 83399 -1
tRNA - - AC3_2943 tRNA-Gly 83417 83490 -1
tRNA - - AC3_2944 tRNA-Leu 83495 83580 -1
CDS thrS ZP_02631156.1 AC3_2945 threonyl-tRNA synthetase 84118 86049 1
CDS - ZP_02631157.1 AC3_2946 oligoendopeptidase, M3 family 86509 88203 -1
CDS - ZP_02631158.1 AC3_2947 5-formyltetrahydrofolate cyclo-ligase family protein 88299 88877 -1
CDS - ZP_02631159.1 AC3_2948 conserved hypothetical protein 89103 89915 -1
CDS - ZP_02631160.1 AC3_2949 hypothetical protein 90128 90298 -1
CDS glmS ZP_02631161.1 AC3_2950 glucosamine--fructose-6-phosphate aminotransferase, isomerizing 90318 92150 -1
CDS - ZP_02631162.1 AC3_2951 rubrerythrin family protein 92939 93463 1
CDS glmM ZP_02631163.1 AC3_2952 phosphoglucosamine mutase 93613 94959 -1
CDS - ZP_02631164.1 AC3_2953 conserved domain protein 95432 96724 1
CDS - ZP_02631165.2 AC3_2954 sensor histidine kinase 96986 98221 -1
CDS - ZP_02631166.1 AC3_2955 response regulator 98370 99062 -1
CDS - ZP_02631167.1 AC3_2956 conserved hypothetical protein 99232 99549 -1
CDS - ZP_02631168.1 AC3_2957 TrpR homolog YerC/YecD 99615 99914 -1
CDS - ZP_02631169.1 AC3_2958 conserved hypothetical protein 100054 100893 -1
CDS - ZP_02631170.1 AC3_2959 putative glycogen debranching enzyme, archaeal type 101009 103027 -1
CDS glgP ZP_02631171.1 AC3_2960 glycogen/starch/alpha-glucan phosphorylase 103494 105857 -1
CDS malQ ZP_02631172.1 AC3_2961 4-alpha-glucanotransferase 105850 107343 -1
CDS - ZP_02631173.1 AC3_2962 glycosyl hydrolase, family 31 107365 109512 -1
CDS - ZP_02631174.1 AC3_2963 transcriptional regulator, LacI family 109536 110549 -1
CDS - ZP_02900205.1 AC3_2964 hypothetical protein 110706 110822 -1
CDS - ZP_02631175.1 AC3_2965 putative maltose/maltodextrin ABC transporter, permease protein 110841 111734 -1
CDS - ZP_02631176.1 AC3_2966 putative maltose/maltodextrin ABC transporter, permease protein 111736 112689 -1
CDS - ZP_02631177.1 AC3_2967 putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein 112776 114002 -1