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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - AC3_2862 tRNA-Lys 1 78 1
tRNA - - AC3_2861 tRNA-Lys 96 173 1
tRNA - - AC3_2860 tRNA-Leu 182 267 1
tRNA - - AC3_2859 tRNA-Gly 293 367 1
tRNA - - AC3_2858 tRNA-Gly 372 445 1
tRNA - - AC3_2857 tRNA-Arg 520 598 1
tRNA - - AC3_2856 tRNA-Pro 602 679 1
tRNA - - AC3_2855 tRNA-Gly 683 756 1
tRNA - - AC3_2854 tRNA-Arg 791 869 1
tRNA - - AC3_2853 tRNA-His 872 949 1
tRNA - - AC3_2852 tRNA-Gln 951 1027 1
tRNA - - AC3_2851 tRNA-Lys 1033 1110 1
tRNA - - AC3_2850 tRNA-Leu 1119 1204 1
tRNA - - AC3_2849 tRNA-Gly 1227 1301 1
tRNA - - AC3_2848 tRNA-Gly 1305 1378 1
tRNA - - AC3_2847 tRNA-Arg 1428 1504 1
CDS pepD ZP_02631523.1 AC3_2846 aminoacyl-histidine dipeptidase 1686 3137 1
CDS - ZP_02631524.1 AC3_2845 hypothetical protein 3328 3489 -1
CDS - ZP_02631525.1 AC3_2844 putative lipoprotein 3473 4177 -1
CDS - ZP_02631526.1 AC3_2843 chromate transport protein 4616 5167 1
CDS - ZP_02631527.1 AC3_2842 chromate transport protein 5154 5723 1
rRNA rrs - AC3_2841 16S ribosomal RNA 6200 7717 1
tRNA - - AC3_2840 tRNA-Ala 7876 7953 1
tRNA - - AC3_2839 tRNA-Ile 7957 8035 1
rRNA rrl - AC3_2837 23S ribosomal RNA 8135 11039 1
tRNA - - AC3_2836 tRNA-Asn 11093 11169 1
CDS - ZP_02631528.1 AC3_2835 DNA-binding response regulator 11489 12172 1
CDS - ZP_02631529.1 AC3_2834 sensor histidine kinase 12353 13768 1
CDS - ZP_02631530.1 AC3_2833 putative lipoprotein 13785 15308 1
CDS - ZP_02631531.1 AC3_2832 sulfatase 15444 17333 -1
CDS - ZP_02631532.1 AC3_2831 conserved hypothetical protein 17515 18087 1
CDS - ZP_02631533.1 AC3_2830 oxidoreductase, pyridine nucleotide-disulphide family 18119 19081 1
CDS - ZP_02631534.2 AC3_2829 putative acyl-CoA thioesterase 19218 19778 -1
CDS - ZP_02631535.1 AC3_2828 endodeoxyribonuclease, RusA family protein 19787 20419 -1
CDS gcp ZP_02631536.1 AC3_2827 O-sialoglycoprotein endopeptidase 20561 21580 1
CDS - ZP_02631537.1 AC3_2826 hydrolase, alpha/beta fold family 21595 22614 1
CDS - ZP_02631538.1 AC3_2825 serine protease 22731 24110 1
CDS - ZP_02631539.1 AC3_2824 PTS system, lactose/cellobiose-specific IIB component 24344 24673 1
CDS - ZP_02631540.1 AC3_2823 putative ethanolamine utilization protein EutH 24827 25951 1
CDS - ZP_02631541.1 AC3_2822 ApbE family protein 26074 27102 -1
CDS - ZP_02631542.1 AC3_2821 putative lipoprotein 27137 27580 -1
CDS - ZP_02631543.1 AC3_2820 conserved hypothetical protein 27721 28092 1
CDS - ZP_02631544.1 AC3_2819 conserved hypothetical protein 28285 28815 1
CDS - ZP_02631545.1 AC3_2818 putative mannosyltransferase 29042 30187 -1
CDS - ZP_02631546.1 AC3_2817 putative spore coat protein 30316 31323 1
CDS - ZP_02631547.1 AC3_2816 conserved hypothetical protein 31331 32014 1
CDS - ZP_02631548.1 AC3_2815 putative spore coat protein 32030 33058 1
CDS mtfB ZP_02631549.1 AC3_2814 mannosyltransferase B 33240 34367 -1
CDS cotS ZP_02631550.1 AC3_2813 spore coat protein CotS 34476 35480 1
CDS - ZP_02631551.1 AC3_2812 peptidase family protein 35684 36571 1
CDS - ZP_02631552.1 AC3_2811 conserved hypothetical protein 36734 36970 1
CDS - ZP_02631553.1 AC3_2810 lysM domain protein 37330 38892 1
CDS cphB ZP_02631554.1 AC3_2809 cyanophycinase 38992 39819 1
CDS cphA ZP_02631555.1 AC3_2808 cyanophycin synthetase 39806 42430 1
CDS ispE ZP_02631556.2 AC3_2807 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 42572 43432 1
CDS - ZP_02631557.1 AC3_2806 stage II sporulation protein R 43501 44130 1
CDS - ZP_02631558.1 AC3_2805 thiamin biosynthesis protein ThiI 44176 45156 1
CDS - ZP_02631559.1 AC3_2804 conserved hypothetical protein 45179 45598 1
CDS pyrG ZP_02631560.1 AC3_2803 CTP synthase 45939 47546 1
CDS rho ZP_02631561.1 AC3_2802 transcription termination factor Rho 47810 49270 1
CDS - ZP_02631562.1 AC3_2801 putative monogalactosyldiacylglycerol synthase 49313 50437 -1
CDS rpmE ZP_02631563.1 AC3_2800 ribosomal protein L31 50546 50752 -1
CDS tdk ZP_02631564.1 AC3_2799 thymidine kinase 50908 51507 1
CDS prfA ZP_02631566.1 AC3_2797 peptide chain release factor 1 53353 54435 1
CDS - ZP_02631567.1 AC3_2796 conserved hypothetical protein 54514 55104 1
CDS - ZP_02631568.1 AC3_2795 Sua5/YciO/YrdC/YwlC family protein 55127 56179 1
CDS rpiB ZP_02631570.1 AC3_2794 ribose 5-phosphate isomerase B 56443 56892 1
CDS upp ZP_02631571.1 AC3_2793 uracil phosphoribosyltransferase 56938 57567 1
CDS mnaA ZP_02631572.1 AC3_2792 UDP-N-acetylglucosamine 2-epimerase 57631 58785 1
CDS - ZP_02631573.1 AC3_2791 acetyl-CoA acetyltransferase 59053 60231 1
CDS atpB ZP_02631575.1 AC3_2789 ATP synthase F0, A subunit 61335 62009 1
CDS atpE ZP_02631576.1 AC3_2788 ATP synthase F0, C subunit 62070 62288 1
CDS atpF ZP_02631577.1 AC3_2787 ATP synthase F0, B subunit 62388 62867 1
CDS atpH ZP_02631578.1 AC3_2786 ATP synthase F1, delta subunit 62870 63409 1
CDS atpA ZP_02631579.1 AC3_2785 ATP synthase F1, alpha subunit 63420 64928 1
CDS atpG ZP_02631580.1 AC3_2784 ATP synthase F1, gamma subunit 64993 65844 1
CDS atpD ZP_02631581.1 AC3_2783 ATP synthase F1, beta subunit 65858 67255 1
CDS atpC ZP_02631582.1 AC3_2782 ATP synthase F1, epsilon subunit 67271 67672 1
CDS - ZP_02631583.1 AC3_2781 conserved hypothetical protein 67854 68498 1
CDS murA ZP_02631584.1 AC3_2780 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 68521 69786 1
CDS spoIID ZP_02631585.1 AC3_2779 stage II sporulation protein D 69898 70920 1
CDS - ZP_02631586.1 AC3_2778 putative peptidase 71037 71807 1
CDS spoIIID ZP_02631587.1 AC3_2777 stage III sporulation protein D 71881 72132 1
CDS mbl ZP_02631588.1 AC3_2776 mbl protein 72223 73260 1
CDS - ZP_02631589.1 AC3_2775 putative sporulation protein YyaC 73299 73829 -1
CDS - ZP_02631590.1 AC3_2774 hypothetical protein 73917 74579 1
tRNA - - AC3_2773 tRNA-Thr 74743 74818 1
tRNA - - AC3_2772 tRNA-Tyr 74823 74910 1
tRNA - - AC3_2771 tRNA-Val 74914 74989 1
tRNA - - AC3_2770 tRNA-Thr 75008 75083 1
tRNA - - AC3_2769 tRNA-Tyr 75088 75175 1
tRNA - - AC3_2768 tRNA-Thr 75199 75274 1
tRNA - - AC3_2767 tRNA-Tyr 75279 75366 1
CDS metK ZP_02631591.1 AC3_2766 S-adenosylmethionine synthetase 75796 76971 1
CDS nagA ZP_02631592.1 AC3_2765 N-acetylglucosamine-6-phosphate deacetylase 77111 78247 -1
CDS - ZP_02631593.1 AC3_2764 helicase, RecD/TraA family 78384 80618 1
CDS - ZP_02631594.1 AC3_2763 hypothetical protein 80636 81598 1
CDS - ZP_02631595.1 AC3_2762 comF protein, homolog 81574 82233 1
CDS raiA ZP_02631596.1 AC3_2761 ribosomal subunit interface protein 82685 83224 1
CDS secA ZP_02631597.1 AC3_2760 preprotein translocase, SecA subunit 83461 85983 1