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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - AC3_0322 tRNA-Phe 950 1027 -1
rRNA rrf - AC3_0321 5S ribosomal RNA 1038 1155 -1
rRNA rrl - AC3_0320 23S ribosomal RNA 1273 4178 -1
rRNA rrs - AC3_0318 16S ribosomal RNA 4364 5881 -1
CDS - ZP_02631640.1 AC3_0317 putative membrane protein 6444 7100 -1
CDS - ZP_02631641.1 AC3_0316 peptidase, M23/M37 family 7694 8848 1
CDS - ZP_02631642.1 AC3_0315 5'-nucleotidase, lipoprotein e(P4) family 9071 9934 1
CDS - ZP_02631643.2 AC3_0314 hypothetical protein 10139 10336 -1
CDS - ZP_02631644.1 AC3_0313 6-phospho-alpha-glucosidase 10882 12207 -1
CDS - ZP_02631645.1 AC3_0312 putative SIS domain 12463 12963 -1
CDS - ZP_02631646.1 AC3_0311 transcriptional regulator, RpiR family 13187 13957 -1
CDS - ZP_02631647.1 AC3_0310 pts system maltose-specific eiicb component 14212 15795 -1
CDS cbiO ZP_02631648.1 AC3_0309 cobalt ABC transporter, ATP-binding protein 16256 17113 -1
CDS cbiQ ZP_02631649.1 AC3_0308 cobalt ABC transporter, permease protein CbiQ 17128 17898 -1
CDS cbiN ZP_02631650.1 AC3_0307 cobalt transport protein 17882 18193 -1
CDS cbiM ZP_02631651.1 AC3_0306 cobalamin biosynthesis protein CbiM 18193 18936 -1
CDS nagH ZP_02631652.1 AC3_0305 hyaluronidase 19815 24701 -1
CDS - ZP_02631653.1 AC3_0304 putative membrane protein 24964 25353 1
CDS - ZP_02631654.1 AC3_0303 transcriptional regulator, RpiR family 25552 26391 -1
CDS - ZP_02631655.1 AC3_0302 ROK family protein 26582 27469 -1
CDS - ZP_02631656.1 AC3_0301 conserved hypothetical protein subfamily 27625 28077 -1
CDS - ZP_02631657.1 AC3_0300 sodium/solute symporter family protein 28188 29705 -1
CDS nanA ZP_02631658.1 AC3_0299 N-acetylneuraminate lyase 29809 30675 -1
CDS nanE ZP_02631659.1 AC3_0298 N-acetylmannosamine-6-phosphate epimerase 30712 31377 -1
CDS - ZP_02631660.1 AC3_0297 nitroreductase family protein 31663 32331 -1
CDS - ZP_02631661.1 AC3_0296 ABC transporter, ATP-binding protein 32642 33667 1
CDS - ZP_02631662.1 AC3_0295 putative ABC transporter, permease protein 33670 34488 1
CDS - ZP_02631663.1 AC3_0294 conserved hypothetical protein 34493 35284 1
CDS - ZP_02631664.1 AC3_0293 putative esterase 35507 36481 -1
CDS luxS ZP_02631665.1 AC3_0292 autoinducer-2 production protein LuxS 36830 37285 -1
CDS - ZP_02631666.1 AC3_0291 cysteine synthase family protein 37370 38278 -1
CDS metC ZP_02631667.1 AC3_0290 cystathionine beta-lyase 38265 39419 -1
CDS - ZP_02631668.1 AC3_0289 methyltransferase, UbiE/COQ5 family 39483 40106 -1
CDS mscL ZP_02631669.1 AC3_0288 large conductance mechanosensitive channel protein 40850 41308 1
CDS colA ZP_02631670.1 AC3_0287 microbial collagenase 41456 44770 -1
CDS argR ZP_02631671.1 AC3_0286 arginine repressor 45314 45769 -1
CDS arcC ZP_02631672.1 AC3_0285 carbamate kinase 45842 46786 -1
CDS arcD ZP_02631673.1 AC3_0284 arginine/ornithine antiporter 46847 48283 -1
CDS argF ZP_02631674.1 AC3_0283 ornithine carbamoyltransferase 48428 49423 -1
CDS arcA ZP_02631675.1 AC3_0282 arginine deiminase 49531 50772 -1
CDS - ZP_02631676.1 AC3_0281 beta-galactosidase 51326 53395 -1
CDS - ZP_02631677.1 AC3_0280 amino acid permease family protein 53553 55040 -1
CDS - ZP_02631679.1 AC3_0279 conserved hypothetical protein 56089 56547 -1
CDS - ZP_02631680.1 AC3_0278 perfringolysin O 56742 58244 -1
CDS - ZP_02631681.1 AC3_0277 hypothetical protein 58241 58369 -1
CDS - ZP_02631682.1 AC3_0276 putative membrane protein 58833 59861 -1
CDS - ZP_02631683.1 AC3_0275 conserved hypothetical protein 60532 61998 1
CDS - ZP_02631684.1 AC3_0274 conserved hypothetical protein 62201 62752 -1
CDS - ZP_02631685.1 AC3_0273 conserved domain protein 62828 63484 -1
CDS - ZP_02631686.1 AC3_0272 putative membrane protein 63766 64443 -1
CDS - ZP_02631687.1 AC3_0271 conserved hypothetical protein 64917 65828 -1
CDS - ZP_02631688.2 AC3_0270 sortase family protein 65897 66718 -1
CDS - ZP_02631689.1 AC3_0269 putative surface protein 66898 68466 -1
CDS - ZP_02631690.1 AC3_0268 cell wall surface anchor family protein 68470 70647 -1
CDS - ZP_02631691.1 AC3_0267 beta-N-acetylglucosaminidase/beta-glucosidase 71278 73047 -1
CDS - ZP_02631692.1 AC3_0266 glucuronide permease 73107 74498 -1
CDS uxaC ZP_02631693.1 AC3_0265 glucuronate isomerase 74616 76016 -1
CDS uxuA ZP_02631694.1 AC3_0264 mannonate dehydratase 76045 77097 -1
CDS - ZP_02631695.1 AC3_0263 khg/kdpg aldolase 77188 77796 -1
CDS - ZP_02631696.1 AC3_0262 D-mannonate oxidoreductase 77811 78662 -1
CDS - ZP_02631697.1 AC3_0261 probable transcriptional regulator 78852 79541 -1
CDS - ZP_02631698.1 AC3_0260 beta-glucuronidase 79684 81483 -1
CDS - ZP_02631699.1 AC3_0259 2-keto-3-deoxygluconate kinase 81547 82572 -1
CDS - ZP_02631700.1 AC3_0258 glucuronate isomerase 82601 83446 -1
CDS - ZP_02631701.1 AC3_0257 RNA 2'-phosphotransferase 83734 84285 -1
CDS - ZP_02631702.1 AC3_0256 hypothetical protein 84756 85208 -1
CDS - ZP_02631704.1 AC3_0255 putative transcriptional regulator, MarR family 85673 86089 -1
CDS - ZP_02631705.1 AC3_0254 conserved hypothetical protein 86259 86717 1
CDS - ZP_02900210.1 AC3_0253 hypothetical protein 87099 87245 -1
CDS - ZP_02631706.1 AC3_0252 putative membrane protein 87356 87844 1
CDS - ZP_02631707.1 AC3_0251 transcription regulator, Cro/CI family -related protein 87865 88071 1
CDS - ZP_02631708.1 AC3_0250 ABC transporter, ATP-binding protein 88258 89814 -1
CDS - ZP_02631709.1 AC3_0249 hypothetical protein 90081 90206 -1
CDS - ZP_02631711.1 AC3_0248 conserved hypothetical protein 90602 91147 1
CDS rbr ZP_02631712.1 AC3_0247 rubrerythrin 91310 91897 -1
CDS - ZP_02631713.1 AC3_0244 CAAX amino terminal protease family protein 92850 93776 -1
CDS - ZP_02631714.1 AC3_0243 cinA family protein 94420 95658 -1
CDS - ZP_02631715.1 AC3_0242 putative membrane protein 95987 96880 1
CDS - ZP_02631716.1 AC3_0241 hypothetical protein 97236 97388 -1
CDS - ZP_02631717.1 AC3_0240 putative membrane protein 97589 98608 -1
CDS - ZP_02631718.1 AC3_0239 C4-dicarboxylate transporter family protein 99122 100138 -1
CDS - ZP_02631719.1 AC3_0238 conserved hypothetical protein 100382 100708 -1
CDS - ZP_02631720.1 AC3_0237 sortase 100995 101711 -1
CDS - ZP_02631722.1 AC3_0235 putative surface anchored protein 105640 106119 1
CDS - ZP_02631724.1 AC3_0233 conserved hypothetical protein 106701 106913 -1
CDS - ZP_02631725.1 AC3_0232 putative membrane protein 107005 107574 1
CDS - ZP_02631726.1 AC3_0231 putative ABC transporter, permease protein 107743 109722 -1
CDS - ZP_02631727.1 AC3_0230 ABC transporter, ATP-binding protein 109712 110482 -1
CDS - ZP_02631728.1 AC3_0229 hypothetical protein 111013 111210 -1
CDS - ZP_02631729.1 AC3_0228 hypothetical protein 111386 111571 -1
CDS - ZP_02631730.1 AC3_0227 sensor histidine kinase 111621 112634 -1
CDS - ZP_02631731.1 AC3_0226 DNA-binding response regulator 112631 113311 -1
CDS - ZP_02631732.1 AC3_0225 putative membrane protein 113451 114251 -1
CDS - ZP_02631733.1 AC3_0224 conserved hypothetical protein 114367 115617 1
CDS - ZP_02631734.1 AC3_0223 hypothetical protein 115629 116801 1
CDS - ZP_02631735.1 AC3_0222 putative N-acetylmuramoyl-L-alanine amidase 116814 117773 1
CDS - ZP_02631736.1 AC3_0221 conserved hypothetical protein 117831 118055 -1
CDS - ZP_02631737.1 AC3_0220 conserved hypothetical protein 118339 118566 -1
CDS - ZP_02631738.1 AC3_0219 conserved domain protein 118712 120277 -1
CDS - ZP_02631739.1 AC3_0218 conserved hypothetical protein 120721 120972 1