xBASE Logo
About | Contact | Home

Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS holA ZP_02631856.1 AC3_2629 DNA polymerase III, delta subunit 245 1291 -1
CDS - ZP_02631857.1 AC3_2630 competence family protein 1335 2990 -1
CDS spoVAE ZP_02631858.1 AC3_2631 stage V sporulation protein AE 3042 3398 -1
CDS spoVAD ZP_02631859.1 AC3_2632 stage V sporulation protein AD 3463 4482 -1
CDS spoVAC ZP_02631860.1 AC3_2633 stage V sporulation protein AC 4488 4955 -1
CDS sigF ZP_02631861.1 AC3_2634 RNA polymerase sigma-F factor 5093 5848 -1
CDS spoIIAB ZP_02631862.1 AC3_2635 anti-sigma F factor 5866 6288 -1
CDS spoIIAA ZP_02631863.1 AC3_2636 anti-sigma F factor antagonist 6302 6637 -1
CDS - ZP_02631864.1 AC3_2637 ATP-dependent protease 6771 9056 -1
CDS deoC ZP_02631865.1 AC3_2638 deoxyribose-phosphate aldolase 9256 9930 -1
CDS - ZP_02631866.1 AC3_2639 conserved hypothetical protein 10187 10594 1
CDS - ZP_02631867.1 AC3_2640 ATPase, P-type , HAD superfamily, subfamily IC 10798 13347 -1
CDS - ZP_02631868.1 AC3_2641 putative manganese-dependent inorganic pyrophosphatase 13592 15241 1
CDS - ZP_02631869.1 AC3_2642 HAD-superfamily subfamily IB hydrolase, TIGR01490 15285 15926 -1
CDS - ZP_02631870.1 AC3_2643 conserved hypothetical protein 16009 16383 -1
CDS - ZP_02631871.1 AC3_2644 glutamate decarboxylase 16593 17987 -1
CDS - ZP_02900211.1 AC3_2645 putative membrane protein 18573 19361 -1
CDS - ZP_02900212.1 AC3_2646 hypothetical protein 19360 19503 1
CDS - ZP_02631873.1 AC3_2647 glutamate:gamma aminobutyrate antiporter family protein 19741 21159 -1
CDS nifJ ZP_02631874.1 AC3_2648 pyruvate-flavodoxin oxidoreductase 21863 25378 -1
CDS - ZP_02631875.1 AC3_2649 flavodoxin 25483 25908 -1
CDS murG ZP_02631876.1 AC3_2650 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 26115 27188 -1
CDS sspC1 ZP_02631877.1 AC3_2651 small, acid-soluble spore protein 27373 27552 1
CDS recJ ZP_02631878.1 AC3_2652 single-stranded-DNA-specific exonuclease RecJ 27674 29452 -1
CDS - ZP_02631879.1 AC3_2653 peptidase, M16 family 29464 30675 -1
CDS - ZP_02631880.1 AC3_2654 DJ-1 family protein 30890 31465 -1
CDS gyrA ZP_02631881.1 AC3_2655 DNA topoisomerase, GyrA/ParC subunit family 31477 34416 -1
CDS - ZP_02631882.1 AC3_2656 DNA topoisomerase, GyrB/ParE subunit family 34430 36376 -1
CDS uvdE ZP_02631884.1 AC3_2660 UV damage endonuclease UvdE 39933 41171 1
CDS - ZP_02631885.1 AC3_2661 putative sporulation protein YtaF 41256 41864 1
CDS - ZP_02631886.1 AC3_2662 alcohol dehydrogenase, short-chain family 42034 43203 -1
CDS - ZP_02631887.1 AC3_2663 amino acid permease family protein 43434 44924 -1
CDS - ZP_02631888.1 AC3_2664 alpha-glucosidase 45275 47515 -1
CDS - ZP_02631890.1 AC3_2665 ROK family protein 47564 48457 -1
CDS - ZP_02631891.1 AC3_2666 bacterial extracellular solute-binding protein 48597 50045 -1
CDS - ZP_02631892.1 AC3_2667 putative membrane protein 50430 50924 1
CDS - ZP_02631893.1 AC3_2668 putative alpha-mannosidase 50992 54126 -1
CDS - ZP_02631894.1 AC3_2669 ABC transporter, permease protein 54443 55399 -1
CDS - ZP_02631895.1 AC3_2670 ABC transporter, permease protein 55417 56385 -1
CDS moaC ZP_02631896.1 AC3_2671 molybdenum cofactor biosynthesis protein C 56614 57090 -1
CDS modB ZP_02631897.1 AC3_2672 molybdate ABC transporter, permease protein 57127 57783 -1
CDS modA ZP_02631898.1 AC3_2673 molybdate ABC transporter, molybdate-binding protein 57787 58557 -1
CDS - ZP_02631899.1 AC3_2674 molybdenum cofactor synthesis protein 58542 59033 -1
CDS - ZP_02631900.1 AC3_2675 DNA-binding response regulator, AraC family 59374 60897 -1
CDS - ZP_02631901.1 AC3_2676 sensor histidine kinase 60902 62638 -1
CDS - ZP_02631902.1 AC3_2677 putative membrane protein 62860 63537 1
CDS - ZP_02631903.1 AC3_2678 FemAB family protein 63803 65140 1
CDS - ZP_02631904.1 AC3_2679 transcriptional regulator, PadR family 65502 65807 1
CDS - ZP_02631905.1 AC3_2680 amino acid ABC transporter, ATP-binding protein 65854 66591 -1
CDS - ZP_02631906.1 AC3_2681 amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family 66610 68169 -1
CDS - ZP_02631907.1 AC3_2682 iron-sulfur cluster-binding protein 68291 69070 1
CDS - ZP_02631908.1 AC3_2683 conserved hypothetical protein 69204 69620 -1
CDS - ZP_02631909.1 AC3_2684 hypothetical protein 70126 70947 -1
CDS - ZP_02631910.1 AC3_2685 hypothetical protein 70966 72222 -1
CDS virJ ZP_02631911.1 AC3_2686 sensor histidine kinase 72338 73786 -1
CDS virI ZP_02631912.1 AC3_2687 DNA-binding response regulator 73776 74474 -1
CDS - ZP_02631913.1 AC3_2688 hypothetical protein 74675 75070 -1
CDS - ZP_02631914.1 AC3_2689 conserved hypothetical protein 75203 75493 -1
CDS - ZP_02631915.1 AC3_2690 helicase domain protein 75505 77262 -1
CDS - ZP_02631916.1 AC3_2691 putative ribosomal protein L11 methyltransferase 77525 78385 1
CDS - ZP_02631917.1 AC3_2692 putative membrane protein 78789 79304 -1
CDS - ZP_02631918.1 AC3_2693 conserved hypothetical protein 79322 79696 -1
CDS - ZP_02631919.1 AC3_2694 putative thiamin biosynthesis lipoprotein ApbE 79697 80734 -1
CDS - ZP_02631920.1 AC3_2695 conserved hypothetical protein 80906 84148 -1
CDS - ZP_02631921.1 AC3_2696 hypothetical protein 84161 85207 -1
CDS - ZP_02631922.1 AC3_2697 conserved hypothetical protein 85407 85856 -1
CDS - ZP_02631923.1 AC3_2698 major facilitator family transporter 86144 87565 1
CDS - ZP_02631924.1 AC3_2699 subtilase family protein 87689 89443 -1
CDS - ZP_02631925.1 AC3_2700 subtilase family protein 89445 91043 -1
CDS rumA ZP_02631926.1 AC3_2701 23S rRNA -methyltransferase RumA 91514 92869 -1
CDS - ZP_02631927.1 AC3_2702 hypothetical protein 92897 93346 -1
CDS selB ZP_02631928.1 AC3_2703 selenocysteine-specific translation elongation factor 93533 95440 -1
CDS selA ZP_02631929.1 AC3_2704 L-seryl-tRNA selenium transferase 95441 96829 -1
CDS - ZP_02631932.1 AC3_2706 putative comE operon protein 1 97922 98686 -1
CDS dacF ZP_02631933.1 AC3_2707 D-alanyl-D-alanine carboxypeptidase 98874 100208 1
CDS - ZP_02631934.1 AC3_2708 pseudouridine synthase, RluA family 100240 101136 -1
CDS - ZP_02631935.1 AC3_2709 cell envelope-related transcriptional attenuator domain protein 101133 102446 -1
CDS - ZP_02631936.1 AC3_2710 HD domain protein 102469 103038 -1
CDS nadD ZP_02631937.1 AC3_2711 nicotinate nucleotide adenylyltransferase 103041 103649 -1
CDS - ZP_02631938.1 AC3_2712 putative RNA-binding protein 103651 103953 -1
CDS obg ZP_02631939.1 AC3_2713 spo0B-associated GTP-binding protein 103971 105257 -1
CDS rpmA ZP_02631940.1 AC3_2714 ribosomal protein L27 105426 105728 -1
CDS - ZP_02631941.2 AC3_2715 conserved hypothetical protein 105732 106037 -1