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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS infC ZP_02632060.1 AC3_2423 translation initiation factor IF-3 725 1246 1
CDS rpmI ZP_02632061.1 AC3_2422 ribosomal protein L35 1268 1465 1
CDS rplT ZP_02632062.1 AC3_2421 ribosomal protein L20 1495 1854 1
CDS - ZP_02632063.1 AC3_2420 potassium uptake protein, TrkH family 2083 3423 1
CDS - ZP_02632064.1 AC3_2419 putative potassium uptake protein 3446 4111 1
CDS - ZP_02632065.1 AC3_2418 RNA methyltransferase, TrmH family 4137 4910 1
CDS pheS ZP_02632066.1 AC3_2417 phenylalanyl-tRNA synthetase, alpha subunit 5524 6543 1
CDS pheT ZP_02632067.1 AC3_2416 phenylalanyl-tRNA synthetase, beta subunit 6567 8948 1
CDS - ZP_02632068.1 AC3_2415 hypothetical protein 9029 10384 1
CDS - ZP_02632069.1 AC3_2414 putative histidinol-phosphatase 10473 11261 -1
CDS - ZP_02900221.1 AC3_2413 hypothetical protein 11452 11571 1
CDS - ZP_02632070.1 AC3_2412 peptidase, U32 family 11660 14011 1
CDS - ZP_02632071.1 AC3_2411 MutS2 family protein 14025 16385 1
CDS spoVD ZP_02632072.1 AC3_2410 stage V sporulation protein D 16649 18832 1
CDS - ZP_02632073.1 AC3_2409 conserved hypothetical protein 19070 19513 1
CDS - ZP_02632074.1 AC3_2408 FMN-dependent dehydrogenase 19527 20549 1
CDS - ZP_02632075.1 AC3_2407 glycerophosphoryl diester phosphodiesterase family protein 20553 21269 1
CDS - ZP_02632076.1 AC3_2406 calx-beta domain protein 21494 24292 1
CDS - ZP_02632077.1 AC3_2405 fibronectin type III domain protein 24450 28889 1
CDS - ZP_02632078.2 AC3_2404 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 29023 29634 1
CDS - ZP_02632079.1 AC3_2403 phosphoglucomutase/phosphomannomutase family protein 29790 31517 1
CDS - ZP_02632080.1 AC3_2402 TPR domain protein 31809 32906 1
CDS - ZP_02632081.1 AC3_2401 glycosyl transferase, WecB/TagA/CpsF family 32922 33638 1
CDS - ZP_02632082.1 AC3_2400 hypothetical protein 33638 34924 1
CDS - ZP_02632083.1 AC3_2399 methenyltetrahydrofolate cyclohydrolase 34953 35588 1
CDS pdaA ZP_02632084.1 AC3_2398 delta-lactam-biosynthetic de-N-acetylase 35768 36565 -1
CDS ychF ZP_02632085.1 AC3_2397 GTP-binding protein YchF 36724 37821 1
tRNA - - AC3_2396 tRNA-Sec 37915 38011 -1
CDS mraW ZP_02632086.1 AC3_2395 S-adenosyl-methyltransferase MraW 38369 39301 1
CDS - ZP_02632087.1 AC3_2394 putative cell division protein FtsL 39373 39801 1
CDS spoVD ZP_02632088.1 AC3_2393 stage V sporulation protein D 39989 42208 1
CDS murE ZP_02632089.1 AC3_2392 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 42303 43757 1
CDS murF ZP_02632090.1 AC3_2391 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 43770 45131 1
CDS mraY ZP_02632091.1 AC3_2390 phospho-N-acetylmuramoyl-pentapeptide- transferase 45181 46152 1
CDS spoVE ZP_02632092.1 AC3_2389 stage V sporulation protein E 46180 47304 1
CDS - ZP_02632093.1 AC3_2388 cell division protein FtsQ 47462 48208 1
CDS - ZP_02632094.1 AC3_2387 conserved hypothetical protein 48222 48938 1
CDS sbp ZP_02632095.1 AC3_2386 small basic protein 48951 49289 1
CDS - ZP_02632096.1 AC3_2385 conserved hypothetical protein 49302 50033 1
CDS - ZP_02632097.1 AC3_2384 conserved hypothetical protein TIGR00044 50133 50792 1
CDS - ZP_02632098.1 AC3_2383 conserved hypothetical protein 50811 51260 1
CDS - ZP_02632099.1 AC3_2382 S4 domain protein 51262 52023 1
CDS - ZP_02632100.1 AC3_2381 putative cell division protein DivIVA 52036 52662 1
CDS - ZP_02632101.1 AC3_2380 pseudouridine synthase, RluA family 52800 53720 1
CDS pyrR ZP_02632102.1 AC3_2379 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase 53724 54260 1
CDS - ZP_02632103.1 AC3_2378 putative methyltransferase 54280 55407 1
CDS - ZP_02632104.1 AC3_2377 fibronectin-binding protein 55518 57245 -1
CDS dapF ZP_02632105.1 AC3_2376 diaminopimelate epimerase 57337 58155 1
CDS - ZP_02632106.1 AC3_2375 putative lipoprotein 58172 59203 1
CDS - ZP_02632107.1 AC3_2374 putative pilus biogenesis protein 59302 60690 1
CDS - ZP_02632108.1 AC3_2373 putative pilus biogenesis protein 60677 61696 1
CDS - ZP_02632109.1 AC3_2372 putative type IV pilin 61689 62117 1
CDS - ZP_02632110.1 AC3_2371 hypothetical protein 62137 62649 1
CDS - ZP_02900220.1 AC3_2370 hypothetical protein 62709 63080 1
CDS - ZP_02900218.1 AC3_2369 putative type IV pilin 63127 63477 1
CDS - ZP_02632113.1 AC3_2368 hypothetical protein 63452 64063 1
CDS - ZP_02632114.1 AC3_2367 hypothetical protein 64035 64463 1
CDS - ZP_02632115.1 AC3_2366 hypothetical protein 64460 64807 1
CDS efp ZP_02632116.1 AC3_2365 translation elongation factor P 64978 65535 1
CDS - ZP_02632117.1 AC3_2364 hypothetical protein 65649 66011 1
CDS - ZP_02632118.1 AC3_2363 stage III sporulation protein AA 66211 67095 1
CDS - ZP_02632119.1 AC3_2362 stage III sporulation protein AB 67242 67757 1
CDS - ZP_02632120.1 AC3_2361 stage III sporulation protein AC 67833 68030 1
CDS - ZP_02632121.1 AC3_2360 stage III sporulation protein AD 68118 68504 1
CDS - ZP_02632122.1 AC3_2359 stage III sporulation protein AE 68515 69687 1
CDS spoIIIAF ZP_02632123.1 AC3_2358 stage III sporulation protein AF 69695 70252 1
CDS - ZP_02632124.1 AC3_2357 stage III sporulation protein AG 70267 70872 1
CDS spoIIIAH ZP_02632125.1 AC3_2356 stage III sporulation protein AH 70899 71396 1
CDS asp ZP_02632126.1 AC3_2355 alkaline shock protein 71481 71870 1
CDS nusB ZP_02632127.1 AC3_2354 N utilization substance protein B 71989 72396 1
CDS folD ZP_02632128.1 AC3_2353 folD bifunctional protein 72445 73278 1
CDS xseA ZP_02632129.1 AC3_2352 exodeoxyribonuclease VII, large subunit 73280 74482 1
CDS xseB ZP_02632130.1 AC3_2351 exodeoxyribonuclease VII, small subunit 74501 74728 1
CDS ispA ZP_02632131.1 AC3_2350 geranyltranstransferase 74718 75590 1
CDS dxs ZP_02632132.1 AC3_2349 1-deoxy-D-xylulose-5-phosphate synthase 75611 77470 1
CDS - ZP_02632133.1 AC3_2348 hemolysin A 77482 78297 1
CDS - ZP_02632134.1 AC3_2347 NAD(+)/NADH kinase 78382 79212 1
CDS argR ZP_02632135.1 AC3_2346 arginine repressor 79235 79687 1
CDS recN ZP_02632136.1 AC3_2345 DNA repair protein RecN 79703 81400 1
CDS - ZP_02632137.1 AC3_2344 stage IV sporulation protein B 81577 82737 1
CDS spo0A ZP_02632138.1 AC3_2343 Spo0A protein 82911 83741 1
CDS - ZP_02632139.1 AC3_2342 hypothetical protein 83818 84123 1
CDS - ZP_02632140.1 AC3_2341 hydrolase, NUDIX family 84185 84715 1
CDS - ZP_02632141.1 AC3_2340 putative sporulation protein 84983 85603 1
CDS xerD ZP_02632142.1 AC3_2339 tyrosine recombinase XerD 85653 86525 1
CDS pdp ZP_02632143.1 AC3_2338 pyrimidine-nucleoside phosphorylase 86772 88073 1
CDS dacF ZP_02632144.1 AC3_2337 D-alanyl-D-alanine carboxypeptidase 88325 89533 1
CDS - ZP_02900219.1 AC3_2336 hypothetical protein 89585 89725 1
CDS scpA ZP_02632145.1 AC3_2335 segregation and condensation protein A 89805 90551 1
CDS scpB ZP_02632146.1 AC3_2334 segregation and condensation protein B 90544 91131 1
CDS - ZP_02632147.1 AC3_2333 conserved hypothetical protein 91460 91879 -1
CDS - ZP_02632148.1 AC3_2332 conserved hypothetical protein 91926 92498 -1
CDS - ZP_02632149.1 AC3_2331 D-alanyl-D-alanine carboxypeptidase family protein 92646 93521 1
CDS - ZP_02632150.1 AC3_2330 oxidoreductase family protein 93768 94748 1
CDS gidA ZP_02632151.1 AC3_2328 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 94780 95571 1