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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - AC3_0096 tRNA-Lys 4 81 -1
rRNA rrf - AC3_0095 5S ribosomal RNA 86 203 -1
rRNA rrl - AC3_0094 23S ribosomal RNA 256 3160 -1
rRNA rrs - AC3_0092 16S ribosomal RNA 3346 4863 -1
CDS - ZP_02632153.2 AC3_0091 deoxyguanosine kinase/deoxyadenosine kinase 5409 6020 -1
CDS - ZP_02632154.1 AC3_0090 acetyltransferase, GNAT family 6112 7050 -1
CDS - ZP_02632155.1 AC3_0089 major facilitator family transporter 7075 8241 -1
CDS - ZP_02632156.1 AC3_0088 HesA/MoeB/ThiF family protein 8531 9292 -1
CDS mtnN ZP_02632157.1 AC3_0087 MTA/SAH nucleosidase 9670 10365 1
CDS - ZP_02632158.1 AC3_0086 conserved hypothetical protein 10421 11677 -1
CDS - ZP_02632159.1 AC3_0085 putative D-3-phosphoglycerate dehydrogenase 11825 12730 -1
CDS - ZP_02632160.1 AC3_0084 aminotransferase, class V 12800 13876 -1
CDS - ZP_02632161.1 AC3_0083 hypothetical protein 14030 14212 -1
CDS - ZP_02632162.1 AC3_0082 hypothetical protein 14281 14460 -1
CDS - ZP_02632163.1 AC3_0081 putative membrane protein 14611 15756 -1
CDS bofA ZP_02632164.1 AC3_0080 sigma-K factor processing regulatory protein BofA 16031 16309 -1
CDS - ZP_02632165.1 AC3_0079 conserved hypothetical protein 16325 16603 -1
CDS recR ZP_02632166.1 AC3_0078 recombination protein RecR 16829 17425 -1
CDS - ZP_02632167.1 AC3_0077 conserved hypothetical protein TIGR00103 17523 17861 -1
CDS dnaX ZP_02632168.1 AC3_0076 DNA polymerase III, gamma and tau subunit 17973 19616 -1
CDS folA ZP_02632169.1 AC3_0075 dihydrofolate reductase 19807 20292 1
CDS brnQ ZP_02632170.1 AC3_0074 branched-chain amino acid transport system II carrier protein 20446 21732 -1
tRNA - - AC3_0071 tRNA-Ser 23104 23195 -1
CDS lgt ZP_02632171.1 AC3_0070 prolipoprotein diacylglyceryl transferase 23446 24234 -1
CDS - ZP_02632172.1 AC3_0069 conserved hypothetical protein 24511 25230 -1
CDS - ZP_02632173.1 AC3_0068 putative permease 25243 26136 -1
CDS - ZP_02632174.1 AC3_0067 conserved hypothetical protein 26139 26723 -1
CDS - ZP_02632175.1 AC3_0066 CobW/P47K family protein 26743 27666 -1
CDS plc ZP_02632176.1 AC3_0065 phospholipase C 27854 29050 -1
CDS - ZP_02632177.1 AC3_0064 conserved hypothetical protein 29381 30853 1
CDS - ZP_02632178.1 AC3_0063 conserved hypothetical protein 30953 31615 -1
CDS - ZP_02632179.1 AC3_0062 conserved hypothetical protein 31724 32089 -1
CDS - ZP_02632180.1 AC3_0061 hypothetical protein 32203 32661 -1
CDS - ZP_02632181.1 AC3_0060 cytidine/deoxycytidylate deaminase family protein 32724 33155 -1
CDS - ZP_02632182.1 AC3_0059 putative transporter 33158 34423 -1
CDS - ZP_02632183.1 AC3_0058 hypothetical protein 34752 35666 -1
CDS - ZP_02632184.1 AC3_0057 prophage ps3 protein 01 35675 36100 -1
CDS - ZP_02632185.1 AC3_0056 hypothetical protein 36270 36701 -1
CDS - ZP_02632186.1 AC3_0055 hypothetical protein 36748 37110 -1
CDS - ZP_02632187.1 AC3_0054 sigma factor 37132 37815 -1
CDS - ZP_02632188.1 AC3_0053 hypothetical protein 38300 38812 -1
CDS - ZP_02632189.1 AC3_0052 conserved domain protein 38901 39041 -1
CDS - ZP_02632190.1 AC3_0051 conserved hypothetical protein 39215 40141 -1
CDS - ZP_02632191.1 AC3_0050 conserved hypothetical protein 40153 40998 -1
CDS - ZP_02632192.1 AC3_0049 DnaJ domain protein 41320 41742 -1
CDS - ZP_02632193.1 AC3_0048 hypothetical protein 41834 41977 -1
CDS - ZP_02632194.1 AC3_0047 hypothetical protein 41994 42419 -1
CDS - ZP_02632195.1 AC3_0046 hypothetical protein 42555 42710 -1
CDS - ZP_02632196.1 AC3_0045 conserved hypothetical protein 42824 43636 -1
CDS - ZP_02632197.1 AC3_0044 hypothetical protein 43602 44600 -1
CDS - ZP_02632199.1 AC3_0043 hypothetical protein 44730 45029 -1
CDS - ZP_02632200.1 AC3_0042 conserved domain protein 45046 45246 -1
CDS - ZP_02632201.1 AC3_0041 hypothetical protein 45405 45956 1
CDS - ZP_02632202.1 AC3_0040 Gp26 protein 46003 46833 -1
CDS - ZP_02632203.1 AC3_0039 conserved domain protein 46963 47157 -1
CDS - ZP_02632204.1 AC3_0038 transcriptional regulator, MerR family 47303 48094 1
CDS - ZP_02632205.1 AC3_0037 protein of unknown function 48156 48728 1
CDS - ZP_02632206.1 AC3_0036 prophage LambdaBa04, site-specific recombinase, phage integrase family 49995 51101 1
tRNA - - AC3_0035 tRNA-Arg 51217 51291 -1
CDS - ZP_02632207.1 AC3_0034 transcriptional regulator, TetR family 51346 51915 -1
CDS psd ZP_02632208.1 AC3_0033 phosphatidylserine decarboxylase 52079 52963 1
CDS - ZP_02632209.1 AC3_0032 hypothetical protein 53079 54218 -1
tRNA - - AC3_0031 tRNA-Arg 54388 54466 -1
CDS - ZP_02632210.1 AC3_0030 degV family protein 54655 55530 1
CDS - ZP_02632211.1 AC3_0028 ErfK/YbiS/YcfS/YnhG family protein 57047 58207 1
CDS - ZP_02632212.1 AC3_0027 lichenan-specific phosphotransferase enzyme iia component 58338 58676 -1
CDS - ZP_02632213.1 AC3_0026 lichenan-specific phosphotransferase enzyme iib component 58776 59093 -1
CDS - ZP_02632214.1 AC3_0025 conserved hypothetical protein 59118 60017 -1
CDS - ZP_02632215.1 AC3_0024 lichenan permease iic component 60070 61365 -1
CDS - ZP_02632216.1 AC3_0023 putative ROK family protein 61880 63052 1
CDS yhaM ZP_02632217.1 AC3_0022 3'-5' exoribonuclease YhaM 63149 64141 -1
CDS - ZP_02632218.2 AC3_0021 polyA polymerase family protein 64251 65525 1
CDS addA ZP_02632219.1 AC3_0020 ATP-dependent nuclease, subunit A 65564 69379 -1
CDS addB ZP_02632220.1 AC3_0019 ATP-dependent nuclease, subunit B 69369 72845 -1
CDS - ZP_02632221.1 AC3_0018 hypothetical protein 73054 73218 1
CDS - ZP_02632222.1 AC3_0017 conserved hypothetical protein 73307 74188 -1
CDS - ZP_02632223.1 AC3_0016 hypothetical protein 74437 74619 1
tRNA - - AC3_0015 tRNA-Ser 74652 74744 -1
tRNA - - AC3_0014 tRNA-Ser 74748 74840 -1
CDS - ZP_02632224.1 AC3_0013 hypothetical protein 74948 75214 -1
tRNA - - AC3_0012 tRNA-Ser 75473 75565 -1
tRNA - - AC3_0011 tRNA-Ser 75597 75689 -1
CDS - ZP_02632225.1 AC3_0010 hypothetical protein 75830 76249 -1
CDS serS ZP_02632226.1 AC3_0009 seryl-tRNA synthetase 76428 77705 -1
CDS - ZP_02632227.1 AC3_0008 conserved hypothetical protein 78057 78290 -1
CDS - ZP_02632228.1 AC3_0007 FAD-dependent oxidoreductase 78303 79697 -1
CDS - ZP_02632229.1 AC3_0006 putative membrane protein 79941 82694 -1
CDS - ZP_02632230.1 AC3_0005 conserved hypothetical protein 83045 83548 -1
tRNA - - AC3_0004 tRNA-Ala 83820 83897 -1
tRNA - - AC3_0003 tRNA-Met 83901 83979 -1
CDS - ZP_02900222.1 AC3_0002 conserved hypothetical protein 84577 85233 1
rRNA rrs - AC3_0001 16S ribosomal RNA 87287 88804 -1