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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA rrs - AC3_0705 16S ribosomal RNA 92 1609 1
rRNA rrl - AC3_0707 23S ribosomal RNA 1795 4699 1
rRNA rrf - AC3_0708 5S ribosomal RNA 4752 4870 1
tRNA - - AC3_0709 tRNA-Glu 4876 4952 1
CDS sfsA ZP_02632716.1 AC3_0710 sugar fermentation stimulation protein 5376 6068 1
CDS - ZP_02632717.1 AC3_0711 hydrolase, NUDIX family 6482 7021 1
CDS lysA ZP_02632718.1 AC3_0712 diaminopimelate decarboxylase 7432 8727 1
CDS - ZP_02632719.1 AC3_0713 conserved hypothetical protein 9184 9402 1
CDS - ZP_02632720.1 AC3_0714 signal peptidase I 9405 9935 1
CDS ftsH ZP_02632721.1 AC3_0715 ATP-dependent metalloprotease FtsH 9960 12113 1
CDS - ZP_02632722.1 AC3_0716 putative helicase 12335 14455 1
CDS - ZP_02632723.1 AC3_0717 amino acid ABC transporter, amino acid-binding protein 14911 15747 1
CDS - ZP_02632725.1 AC3_0719 amino acid ABC transporter, ATP-binding protein 16446 17168 1
CDS - ZP_02632726.1 AC3_0720 sulfatase family protein 17386 19194 1
CDS - ZP_02632727.1 AC3_0721 sulfatase domain protein 19446 21290 1
CDS - ZP_02632728.1 AC3_0722 cation efflux family protein 21393 22574 -1
CDS - ZP_02632729.1 AC3_0723 N-acetylmuramoyl-L-alanine amidase, family 2 22817 24478 1
CDS - ZP_02632730.1 AC3_0724 zinc metalloprotease, aminopeptidase I family 24620 25915 1
CDS - ZP_02632731.1 AC3_0725 conserved hypothetical protein 26008 26202 -1
CDS - ZP_02632732.1 AC3_0726 HAD hydrolase, IIB family 26594 27433 1
CDS - ZP_02632733.1 AC3_0727 membrane protein, MmpL family 27649 30978 -1
CDS prfC ZP_02632734.1 AC3_0728 peptide chain release factor 3 31239 32834 -1
CDS - ZP_02632735.1 AC3_0729 conserved domain protein 33048 33653 -1
CDS - ZP_02632736.1 AC3_0730 phosphatase YidA 34029 34829 1
CDS - ZP_02632737.1 AC3_0731 galactosyl transferase CpsE 34861 35523 1
CDS - ZP_02632738.1 AC3_0732 N-acetyl-mannosamine transferase 35542 36264 1
CDS - ZP_02632739.1 AC3_0733 glycosyl transferase, group 1 family protein 36268 37365 1
CDS - ZP_02632740.1 AC3_0734 conserved hypothetical protein 37358 38794 1
CDS - ZP_02632741.1 AC3_0735 glycosyl transferase, group 1 family protein 38874 40007 1
CDS - ZP_02632742.1 AC3_0736 LicD family protein 40024 40824 1
CDS - ZP_02632743.1 AC3_0737 polysaccharide biosynthesis protein 40845 42296 1
CDS - ZP_02632744.1 AC3_0738 cell wall binding repeat/zinc carboxypeptidase family protein 42419 44140 1
CDS - ZP_02632745.1 AC3_0739 cell wall binding repeat/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 44236 46911 1
CDS - ZP_02632746.1 AC3_0740 cell wall binding repeat domain protein 47031 48689 1
CDS - ZP_02632747.1 AC3_0741 transcriptional regulator, MarR family/choline/ethanolamine kinase 48808 50676 1
CDS - ZP_02632748.1 AC3_0742 putative membrane protein 50702 51670 1
CDS - ZP_02632749.1 AC3_0743 nucleotidyl transferase family protein 51817 52500 1
CDS - ZP_02632750.1 AC3_0744 surface protein PspA 52619 54103 -1
CDS - ZP_02632751.1 AC3_0745 transcriptional regulator, LytR family 54207 55211 -1
CDS brnQ ZP_02632752.1 AC3_0746 branched-chain amino acid transport system II carrier protein 55498 56772 -1
CDS trpS ZP_02632753.1 AC3_0747 tryptophanyl-tRNA synthetase 57526 58524 1
CDS - ZP_02632754.1 AC3_0748 hypothetical protein 59127 59693 1
CDS - ZP_02632755.2 AC3_0749 putative arylsulfatase regulator 59776 60888 1
CDS pstS ZP_02632756.1 AC3_0750 phosphate ABC transporter, phosphate-binding protein 61098 61928 1
CDS pstS ZP_02632757.1 AC3_0751 phosphate ABC transporter, phosphate-binding protein 62152 62970 1
CDS pstC ZP_02632758.1 AC3_0752 phosphate ABC transporter, permease protein PstC 63052 63939 1
CDS pstA ZP_02632759.1 AC3_0753 phosphate ABC transporter, permease protein PstA 63942 64766 1
CDS pstB ZP_02632760.1 AC3_0754 phosphate ABC transporter, ATP-binding protein 64784 65545 1
CDS phoU ZP_02632761.1 AC3_0755 phosphate transport system regulatory protein PhoU 65570 66223 1
CDS - ZP_02632762.1 AC3_0756 DNA-binding response regulator 66383 67078 1
CDS - ZP_02632763.1 AC3_0757 conserved hypothetical protein 67243 67866 -1