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Clostridium perfringens E str. JGS1987, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_02632822.1 AC3_3040 conserved hypothetical protein 594 1103 -1
CDS - ZP_02632823.1 AC3_3041 RNA methyltransferase, TrmH family, group 3 1119 1988 -1
CDS thyX ZP_02632824.1 AC3_3042 thymidylate synthase, flavin-dependent 2011 2748 -1
CDS - ZP_02632825.1 AC3_3043 conserved hypothetical protein 2764 3174 -1
CDS cysS ZP_02632826.1 AC3_3044 cysteinyl-tRNA synthetase 3400 4800 -1
CDS proS ZP_02632827.1 AC3_3045 prolyl-tRNA synthetase 4905 6617 -1
CDS ispD ZP_02632828.2 AC3_3046 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6971 7648 -1
CDS - ZP_02632829.1 AC3_3047 PIN/TRAM domain protein 7662 8768 -1
CDS - ZP_02632830.1 AC3_3048 conserved hypothetical protein 9080 9481 1
CDS - ZP_02632831.1 AC3_3049 helix-hairpin-helix domain protein 9515 10579 -1
CDS radA ZP_02632832.2 AC3_3050 DNA repair protein RadA 10599 11984 -1
CDS nagB ZP_02632833.1 AC3_3051 glucosamine-6-phosphate isomerase 12212 12940 -1
CDS - ZP_02632834.1 AC3_3052 transcriptional regulator, GntR family 12937 13659 -1
CDS - ZP_02632836.1 AC3_3053 glutaredoxin-like protein, YruB-family 14117 14344 1
CDS gapN ZP_02632837.1 AC3_3054 glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent 14467 15915 -1
CDS - ZP_02632838.1 AC3_3055 glutaredoxin-like protein, YruB-family 15932 16165 -1
CDS trxB ZP_02632839.1 AC3_3056 thioredoxin-disulfide reductase 16168 17106 -1
CDS clpC ZP_02632840.1 AC3_3057 negative regulator of genetic competence MecB/ClpC 17383 19827 -1
CDS - ZP_02632841.1 AC3_3058 ATP:guanido phosphotransferase domain protein 19852 20865 -1
CDS - ZP_02632842.1 AC3_3059 conserved hypothetical protein 20849 21376 -1
CDS - ZP_02632843.1 AC3_3060 transcriptional repressor 21396 21851 -1
CDS - ZP_02632844.1 AC3_3061 putative zinc-dependent hydrolase 22068 22721 1
CDS - ZP_02632845.1 AC3_3062 Mur ligase family protein 22771 24432 -1
CDS - ZP_02632846.1 AC3_3063 putative ferredoxin 24570 24740 -1
CDS - ZP_02632847.1 AC3_3064 PSP1 domain protein 24909 25814 -1
CDS - ZP_02632848.1 AC3_3065 putative DNA polymerase III, delta prime subunit 25817 26740 -1
CDS - ZP_02632849.1 AC3_3066 conserved hypothetical protein 26762 27091 -1
CDS - ZP_02632850.1 AC3_3067 hypothetical protein 27248 27403 -1
CDS - ZP_02632851.1 AC3_3068 guanylate kinase, homolog 27420 28010 -1
CDS - ZP_02632852.1 AC3_3069 Orn/Lys/Arg decarboxylase 28257 29687 -1
CDS - ZP_02632853.1 AC3_3070 putative csfB protein 29705 29881 -1
CDS - ZP_02632854.1 AC3_3071 amidohydrolase homolog 30037 31206 1
CDS - ZP_02632855.1 AC3_3072 conserved hypothetical protein 31234 31731 -1
CDS - ZP_02632856.1 AC3_3073 putative cation transporter 32006 32950 1
CDS - ZP_02632857.2 AC3_3074 LD-carboxypeptidase family protein 33042 33923 1
tRNA - - AC3_3075 tRNA-Cys 34248 34322 -1
tRNA - - AC3_3076 tRNA-Phe 34327 34402 -1
CDS - ZP_02632858.1 AC3_3077 hypothetical protein 34839 35030 1
rRNA rrf - AC3_3078 5S ribosomal RNA 35477 35594 -1
tRNA - - AC3_3079 tRNA-Asn 35596 35672 -1
rRNA rrf - AC3_3080 5S ribosomal RNA 35678 35795 -1
rRNA rrl - AC3_3081 23S ribosomal RNA 35846 38749 -1
tRNA - - AC3_3083 tRNA-Ile 38849 38927 -1
tRNA - - AC3_3084 tRNA-Ala 38931 39008 -1
rRNA rrs - AC3_3085 16S ribosomal RNA 39168 40685 -1
CDS murD ZP_02632859.1 AC3_3086 UDP-N-acetylmuramoylalanine--D-glutamate ligase 41185 42561 -1
CDS - ZP_02632860.1 AC3_3087 radical SAM domain protein 42872 43915 1
CDS - ZP_02632861.1 AC3_3088 pyridine nucleotide-disulphide oxidoreductase 44155 45396 -1
CDS - ZP_02632862.1 AC3_3089 LD-carboxypeptidase family protein 45488 46357 -1
CDS - ZP_02632863.1 AC3_3090 peptidase T-like protein 46531 47649 -1
CDS glyS ZP_02632864.1 AC3_3091 glycyl-tRNA synthetase 47835 49238 -1
tRNA - - AC3_3092 tRNA-Asn 49694 49770 -1
CDS lysS ZP_02632865.1 AC3_3093 lysyl-tRNA synthetase 49978 51921 -1
CDS greA ZP_02632866.1 AC3_3094 transcription elongation factor GreA 51947 52423 -1
CDS - ZP_02632867.1 AC3_3095 putative dihydrouridine synthase 52702 53682 -1
CDS - ZP_02632868.1 AC3_3096 putative transcriptional activator 53689 54468 -1
CDS fhs ZP_02632869.1 AC3_3097 formate--tetrahydrofolate ligase 54671 56341 -1
CDS ftsH ZP_02632870.1 AC3_3098 ATP-dependent metalloprotease FtsH 56543 58348 -1
CDS hpt ZP_02632871.1 AC3_3099 hypoxanthine phosphoribosyltransferase 58423 58974 -1
CDS tilS ZP_02632872.1 AC3_3100 tRNA(Ile)-lysidine synthetase 58977 60386 -1
CDS spoIIE ZP_02632873.1 AC3_3101 stage II sporulation protein E 60603 62993 -1
tRNA - - AC3_3102 tRNA-Leu 63316 63406 -1
tRNA - - AC3_3103 tRNA-Met 63421 63499 -1
tRNA - - AC3_3104 tRNA-Met 63501 63578 -1
tRNA - - AC3_3105 tRNA-Leu 63584 63674 -1
tRNA - - AC3_3106 tRNA-Met 63689 63767 -1
tRNA - - AC3_3107 tRNA-Met 63769 63846 -1
tRNA - - AC3_3108 tRNA-Leu 63851 63941 -1
CDS - ZP_02632874.1 AC3_3109 RNA-binding protein 64299 64703 -1