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Clostridium perfringens NCTC 8239, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA rrl - AC7_0602 23S ribosomal RNA 59 2964 -1
rRNA rrs - AC7_0600 16S ribosomal RNA 3151 4668 -1
CDS - ZP_02641967.1 AC7_0599 MgtC family protein 5127 5852 -1
CDS - ZP_02641968.1 AC7_0598 glutaminase 6153 7076 -1
CDS - ZP_02641969.1 AC7_0597 voltage-gated chloride channel family protein 7381 8694 -1
CDS - ZP_02641971.1 AC7_0596 isochorismatase family protein 9071 9730 -1
CDS - ZP_02641972.1 AC7_0595 putative membrane protein 9988 11088 1
CDS - ZP_02641973.1 AC7_0594 hypothetical protein 11139 11591 -1
CDS - ZP_02641974.1 AC7_0593 transcriptional regulator, DeoR family 11882 12628 1
CDS fruK ZP_02641975.1 AC7_0592 1-phosphofructokinase 12628 13548 1
CDS fruA ZP_02641976.1 AC7_0591 PTS system, fructose-specific, IIABC component 13552 15444 1
CDS - ZP_02641977.1 AC7_0590 phosphate transporter family protein 15728 16726 -1
CDS - ZP_02641978.1 AC7_0589 conserved hypothetical protein 16719 17351 -1
CDS - ZP_02641979.1 AC7_0588 CDP-alcohol phosphatidyltransferase family protein 17636 18223 -1
CDS - ZP_02641980.2 AC7_0587 iron-sulfur cluster-binding protein 18387 19499 -1
CDS - ZP_02641981.1 AC7_0586 DedA family protein 19489 20184 -1
CDS - ZP_02641982.1 AC7_0585 ABC transporter, permease protein 20420 21301 -1
CDS - ZP_02641983.1 AC7_0584 ABC transporter, permease protein 21303 22229 -1
CDS - ZP_02641984.1 AC7_0583 ABC transporter, solute-binding protein 22308 23693 -1
CDS - ZP_02641985.1 AC7_0582 DNA-binding response regulator, AraC family 23846 25435 -1
CDS - ZP_02641986.1 AC7_0581 sensor histidine kinase 25448 27199 -1
CDS - ZP_02641987.1 AC7_0580 conserved hypothetical protein TIGR02336 27384 29588 -1
CDS - ZP_02641988.1 AC7_0579 conserved hypothetical protein 29880 30128 -1
CDS - ZP_02641990.1 AC7_0578 conserved hypothetical protein TIGR00149 30528 30935 1
CDS - ZP_02641991.1 AC7_0577 cell wall binding repeat domain protein 31039 32031 1
CDS ribE ZP_02641992.1 AC7_0576 6,7-dimethyl-8-ribityllumazine synthase 32158 32619 -1
CDS ribA ZP_02641993.2 AC7_0575 riboflavin biosynthesis protein RibA 32746 33984 -1
CDS ribE ZP_02641994.1 AC7_0574 riboflavin synthase, alpha subunit 34097 34750 -1
CDS ribD ZP_02641995.1 AC7_0573 riboflavin biosynthesis protein RibD 34772 35869 -1
CDS - ZP_02641996.1 AC7_0572 putative N-acetylmuramoyl-L-alanine amidase 36443 37111 -1
CDS spoVD ZP_02641997.1 AC7_0571 stage V sporulation protein D 37458 39644 1
CDS treR ZP_02641998.1 AC7_0570 trehalose operon repressor 40094 40801 -1
CDS treC ZP_02641999.1 AC7_0569 alpha,alpha-phosphotrehalase 41066 42733 -1
CDS treB ZP_02642000.1 AC7_0568 PTS system, trehalose-specific IIBC component 42937 44358 -1
CDS - ZP_02642001.1 AC7_0567 conserved hypothetical protein 44706 45797 -1
CDS - ZP_02642002.1 AC7_0566 RNA polymerase sigma-70 factor 45790 46365 -1
CDS - ZP_02642003.1 AC7_0565 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein 46624 48177 -1
CDS - ZP_02642004.1 AC7_0564 glycine betaine/L-proline transport, ATP-binding protein 48170 49306 -1
CDS - ZP_02642006.1 AC7_0563 flavodoxin family protein 50611 51267 -1
CDS - ZP_02951665.1 AC7_0562 hypothetical protein 51417 51665 -1
CDS - ZP_02951666.1 AC7_0561 copper-translocating P-type ATPase 51655 54228 1
CDS - ZP_02642008.1 AC7_0560 conserved domain protein 54341 54976 -1
CDS - ZP_02642009.1 AC7_0559 putative exo-alpha-sialidase 55122 58643 -1
CDS - ZP_02642010.1 AC7_0558 conserved hypothetical protein 58852 59115 1
CDS speB ZP_02642011.1 AC7_0557 agmatinase 59429 60286 -1
CDS speE ZP_02642012.1 AC7_0556 spermidine synthase 60273 61124 -1
CDS - ZP_02642013.1 AC7_0555 Orn/Lys/Arg decarboxylase 61139 62593 -1
CDS speD ZP_02642014.1 AC7_0554 S-adenosylmethionine decarboxylase 62611 63417 -1
CDS - ZP_02642015.1 AC7_0553 nitrite/sulfite reductase homolog 63739 65289 -1
CDS - ZP_02642016.1 AC7_0552 conserved domain protein 65539 65769 1
CDS - ZP_02642017.1 AC7_0551 hypothetical protein 65783 65998 1
CDS - ZP_02642018.1 AC7_0550 amino acid/peptide transporter 66160 67551 -1
CDS - ZP_02642019.1 AC7_0549 putative membrane protein 67956 69089 -1
CDS - ZP_02642020.1 AC7_0548 transcriptional regulator, MarR family 69343 69795 1
CDS - ZP_02642021.1 AC7_0547 TrkA domain protein 69909 70589 -1
CDS - ZP_02642022.1 AC7_0546 hypothetical protein 70625 70813 -1
CDS - ZP_02642023.1 AC7_0545 NAD-dependent 4-hydroxybutyrate dehydrogenase 70822 71937 -1
CDS - ZP_02642024.1 AC7_0544 hypothetical protein 72248 72661 -1
CDS - ZP_02642025.1 AC7_0543 putative membrane protein 72870 73511 -1
CDS - ZP_02642026.1 AC7_0542 hypothetical protein 74037 74177 -1
CDS - ZP_02642027.1 AC7_0541 putative lipoprotein 74634 75164 -1
CDS - ZP_02642028.1 AC7_0540 hypothetical protein 75322 75501 -1
CDS - ZP_02642029.1 AC7_0539 response regulator 75582 76250 -1
CDS - ZP_02642030.1 AC7_0538 sensor histidine kinase 76250 77800 -1
CDS - ZP_02642031.1 AC7_0537 putative D-lactate dehydrogenase 78096 79094 -1
CDS - ZP_02642032.1 AC7_0536 transporter, auxin efflux carrier family 79421 80470 -1
CDS - ZP_02642033.1 AC7_0535 hypothetical protein 80725 81606 -1
CDS - ZP_02642034.1 AC7_0534 ABC transporter, permease/ATP-binding protein 82122 83978 -1
CDS - ZP_02642035.1 AC7_0533 ABC transporter, permease/ATP-binding protein 83971 86268 -1
CDS - ZP_02642036.1 AC7_0532 transcriptional regulator, MarR family 86591 87037 1
CDS - ZP_02642037.1 AC7_0531 HAD hydrolase, IIB family 87171 87965 -1
CDS - ZP_02642038.1 AC7_0530 PTS system, L-Ascorbate family, IIC component 88329 89600 -1
CDS - ZP_02642039.1 AC7_0529 PTS system, lactose/cellobiose-specific IIB component 89641 89913 -1
CDS - ZP_02642040.1 AC7_0528 PTS system, L-Ascorbate family, IIA component 90088 90531 -1
CDS - ZP_02642041.1 AC7_0527 hypothetical protein 90901 91707 -1
CDS - ZP_02642042.2 AC7_0526 sensor histidine kinase 91885 93180 -1
CDS - ZP_02642043.1 AC7_0525 DNA-binding response regulator 93185 93901 -1
CDS - ZP_02642044.1 AC7_0524 von Willebrand factor type A domain protein 94179 96041 -1
CDS - ZP_02642045.1 AC7_0523 conserved hypothetical protein 96058 96684 -1
CDS - ZP_02642046.1 AC7_0522 conserved hypothetical protein 96687 97418 -1
CDS - ZP_02642047.1 AC7_0521 hypothetical protein 97466 98101 -1
CDS sipW ZP_02642048.1 AC7_0520 signal peptidase I 98155 98679 -1
CDS - ZP_02642049.1 AC7_0519 sortase B 98918 99667 1
CDS - ZP_02642050.1 AC7_0518 alpha-galactosidase AgaN 99819 102017 -1
CDS - ZP_02642051.1 AC7_0517 cell wall binding repeat domain protein 102444 107123 -1
tRNA - - AC7_0516 tRNA-Met 107486 107561 -1
CDS - ZP_02642052.1 AC7_0515 hypothetical protein 107705 108397 -1
CDS galU ZP_02642053.1 AC7_0514 UTP-glucose-1-phosphate uridylyltransferase 108723 109664 -1
CDS galE ZP_02642054.1 AC7_0513 UDP-glucose 4-epimerase 109704 110720 -1
CDS - ZP_02642055.1 AC7_0512 hypothetical protein 110798 113041 -1
CDS - ZP_02642056.1 AC7_0511 putative RNA polymerase sigma factor 113462 114109 -1
CDS - ZP_02642057.1 AC7_0510 putative capsular polysaccharide transporter protein 114783 116156 -1
CDS - ZP_02642058.1 AC7_0509 acetyltransferase, cyse/laca/lpxa/nodl family 116153 116779 -1
CDS rfbB ZP_02642059.1 AC7_0508 dTDP-glucose 4,6-dehydratase 116799 117848 -1
CDS rfbD ZP_02642060.1 AC7_0507 dTDP-4-dehydrorhamnose reductase 117998 118882 -1
CDS rfbC ZP_02642061.1 AC7_0506 dTDP-4-dehydrorhamnose 3,5-epimerase 118896 119465 -1
CDS rfbA ZP_02642062.1 AC7_0505 glucose-1-phosphate thymidylyltransferase 119478 120389 -1
CDS - ZP_02642063.1 AC7_0504 putative glycosyl transferase 120401 121270 -1
CDS - ZP_02642064.1 AC7_0503 ribitol-5-phosphate 2-dehydrogenase 121284 122324 -1
CDS - ZP_02642065.1 AC7_0502 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 122327 123034 -1