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Clostridium perfringens NCTC 8239, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rplD ZP_02642257.1 AC7_2718 ribosomal protein L4 514 1128 1
CDS rplW ZP_02642258.1 AC7_2717 ribosomal protein L23 1128 1421 1
CDS rplB ZP_02642259.1 AC7_2716 ribosomal protein L2 1476 2309 1
CDS rpsS ZP_02642260.1 AC7_2715 ribosomal protein S19 2380 2661 1
CDS rplV ZP_02642261.1 AC7_2714 ribosomal protein L22 2689 3024 1
CDS rpsC ZP_02642262.1 AC7_2713 ribosomal protein S3 3045 3713 1
CDS rplP ZP_02642263.1 AC7_2712 ribosomal protein L16 3744 4178 1
CDS rpmC ZP_02642264.1 AC7_2711 ribosomal protein L29 4178 4387 1
CDS rpsQ ZP_02642265.1 AC7_2710 ribosomal protein S17 4409 4663 1
CDS rplN ZP_02642266.1 AC7_2709 ribosomal protein L14 4694 5062 1
CDS rplX ZP_02642267.1 AC7_2708 ribosomal protein L24 5086 5400 1
CDS rplE ZP_02642268.1 AC7_2707 ribosomal protein L5 5423 5962 1
CDS rpsH ZP_02642270.1 AC7_2706 ribosomal protein S8 6198 6596 1
CDS rplF ZP_02642271.1 AC7_2705 ribosomal protein L6 6693 7232 1
CDS rplR ZP_02642272.1 AC7_2704 ribosomal protein L18 7263 7622 1
CDS rpsE ZP_02642273.1 AC7_2703 ribosomal protein S5 7643 8140 1
CDS rpmD ZP_02642274.1 AC7_2702 ribosomal protein L30 8152 8325 1
CDS rplO ZP_02642275.1 AC7_2701 ribosomal protein L15 8359 8799 1
CDS secY ZP_02642276.1 AC7_2700 preprotein translocase, SecY subunit 8802 10079 1
CDS adk ZP_02642277.1 AC7_2699 adenylate kinase 10106 10756 1
CDS map ZP_02642278.1 AC7_2698 methionine aminopeptidase, type I 10756 11505 1
CDS - ZP_02642279.2 AC7_2697 conserved hypothetical protein 11594 11872 1
CDS infA ZP_02642280.1 AC7_2696 translation initiation factor IF-1 11880 12098 1
CDS rpmJ ZP_02642281.1 AC7_2695 ribosomal protein L36 12111 12224 1
CDS rpsM ZP_02642282.1 AC7_2694 ribosomal protein S13 12461 12826 1
CDS rpsK ZP_02642283.1 AC7_2693 ribosomal protein S11 12843 13238 1
CDS rpsD ZP_02642284.1 AC7_2692 ribosomal protein S4 13262 13882 1
CDS rpoA ZP_02642285.1 AC7_2691 DNA-directed RNA polymerase, alpha subunit 13967 14914 1
CDS rplQ ZP_02642286.1 AC7_2690 ribosomal protein L17 14931 15272 1
CDS - ZP_02642287.1 AC7_2689 cobalt ABC transporter, ATP-binding protein 15695 16540 1
CDS - ZP_02642288.1 AC7_2688 cobalt ABC transporter, ATP-binding protein 16525 17382 1
CDS - ZP_02642289.1 AC7_2687 cobalt ABC transporter, permease protein 17398 18204 1
CDS truA ZP_02642290.1 AC7_2686 tRNA pseudouridine synthase A 18362 19096 1
CDS rplM ZP_02642291.1 AC7_2685 ribosomal protein L13 19243 19677 1
CDS rpsI ZP_02642292.1 AC7_2684 ribosomal protein S9 19704 20096 1
CDS - ZP_02642293.1 AC7_2683 hypothetical protein 20109 20225 1
CDS cwlD ZP_02642294.1 AC7_2680 N-acetylmuramoyl-L-alanine amidase 22288 22959 1
CDS - ZP_02642295.1 AC7_2679 putative membrane protein 23220 24077 -1
CDS drrA ZP_02642296.1 AC7_2678 DNA-binding response regulator 24331 25029 1
CDS - ZP_02642297.1 AC7_2677 two-component sensor histidine kinase 25007 26836 1
CDS - ZP_02642298.1 AC7_2676 ArsC family protein 27005 27361 1
CDS nrdA ZP_02642299.1 AC7_2675 ribonucleoside-diphosphate reductase, alpha subunit 27645 29876 1
CDS nrdB ZP_02642300.1 AC7_2674 ribonucleoside-diphosphate reductase, beta subunit 29972 31006 1
CDS rpsD ZP_02642301.1 AC7_2673 ribosomal protein S4 31407 32000 1
CDS - ZP_02642302.1 AC7_2672 sigma-54 dependent transcriptional regulator/sensory box protein 32171 34177 -1
CDS ptsI ZP_02642303.1 AC7_2671 phosphoenolpyruvate-protein phosphotransferase 34652 36271 1
CDS iadA ZP_02642304.1 AC7_2670 isoaspartyl dipeptidase 36436 37605 1
CDS trx ZP_02642305.1 AC7_2669 thioredoxin 37722 38036 1
CDS - ZP_02642306.1 AC7_2668 pyridine nucleotide-disulphide oxidoreductase 38063 38923 1
CDS - ZP_02642307.1 AC7_2667 putative spore-cortex-lytic enzyme 38955 39557 -1
CDS - ZP_02642308.1 AC7_2666 conserved hypothetical protein 39628 40590 -1
CDS - ZP_02642309.1 AC7_2665 conserved hypothetical protein TIGR00159 40751 41608 1
CDS - ZP_02642310.1 AC7_2664 conserved hypothetical protein 41575 42903 1
CDS - ZP_02642311.1 AC7_2663 conserved hypothetical protein 42979 44580 1
CDS ptb ZP_02642312.1 AC7_2662 phosphate butyryltransferase 44763 45671 1
CDS buk ZP_02642313.1 AC7_2661 butyrate kinase 45696 46766 1
CDS hydA ZP_02642314.1 AC7_2660 iron hydrogenase 46992 48710 1
CDS - ZP_02642315.1 AC7_2659 putative maltose/maltodextrin ABC transporter, ATP-binding protein 48929 50038 1
CDS - ZP_02642316.1 AC7_2658 conserved hypothetical protein 50073 51014 1
CDS - ZP_02642317.1 AC7_2657 putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein 51472 52698 1
CDS - ZP_02642318.1 AC7_2656 putative maltose/maltodextrin ABC transporter, permease protein 52785 53738 1
CDS - ZP_02642319.1 AC7_2655 putative maltose/maltodextrin ABC transporter, permease protein 53740 54633 1
CDS - ZP_02642320.1 AC7_2654 transcriptional regulator, LacI family 54928 55941 1
CDS - ZP_02642321.1 AC7_2653 glycosyl hydrolase, family 31 55965 58112 1
CDS malQ ZP_02642322.1 AC7_2652 4-alpha-glucanotransferase 58134 59627 1
CDS glgP ZP_02642323.1 AC7_2651 glycogen/starch/alpha-glucan phosphorylase 59620 61983 1
CDS - ZP_02642324.1 AC7_2650 putative glycogen debranching enzyme, archaeal type 62334 64352 1
CDS - ZP_02642325.1 AC7_2649 conserved hypothetical protein 64469 65308 1
CDS - ZP_02642326.1 AC7_2648 TrpR homolog YerC/YecD 65448 65747 1
CDS - ZP_02642327.1 AC7_2647 conserved hypothetical protein 65813 66130 1
CDS - ZP_02642328.1 AC7_2646 response regulator 66300 66992 1
CDS - ZP_02642329.1 AC7_2645 sensor histidine kinase 66973 68376 1
CDS - ZP_02642330.1 AC7_2644 conserved domain protein 68637 69929 -1
CDS glmM ZP_02642331.1 AC7_2643 phosphoglucosamine mutase 70402 71748 1
CDS - ZP_02642332.1 AC7_2642 rubrerythrin family protein 71897 72421 -1
CDS glmS ZP_02642333.1 AC7_2641 glucosamine--fructose-6-phosphate aminotransferase, isomerizing 73214 75046 1
CDS - ZP_02642334.1 AC7_2640 hypothetical protein 75066 75236 1
CDS - ZP_02642335.1 AC7_2639 conserved hypothetical protein 75450 76262 1
CDS - ZP_02642336.1 AC7_2638 5-formyltetrahydrofolate cyclo-ligase family protein 76488 77066 1
CDS - ZP_02642337.1 AC7_2637 oligoendopeptidase, M3 family 77162 78856 1
CDS thrS ZP_02642338.1 AC7_2636 threonyl-tRNA synthetase 79325 81256 -1
tRNA - - AC7_2635 tRNA-Leu 81794 81879 1
tRNA - - AC7_2634 tRNA-Gly 81884 81957 1
tRNA - - AC7_2633 tRNA-Gly 81975 82049 1
tRNA - - AC7_2632 tRNA-Gly 82055 82128 1
tRNA - - AC7_2631 tRNA-Lys 82146 82223 1
CDS - ZP_02642339.1 AC7_2630 lipase/acylhydrolase family protein 82519 83928 1
CDS - ZP_02642340.1 AC7_2629 conserved hypothetical protein 83987 84391 -1
CDS - ZP_02642341.1 AC7_2628 hypothetical protein 84581 85273 1
tRNA - - AC7_2627 tRNA-OTHER 85399 85478 1
tRNA - - AC7_2626 tRNA-Gln 85481 85558 1
tRNA - - AC7_2625 tRNA-Gly 85622 85697 1
tRNA - - AC7_2624 tRNA-Lys 85740 85817 1
CDS - ZP_02642342.1 AC7_2623 putative pyridoxal kinase 85951 86793 1
CDS - ZP_02642343.1 AC7_2622 Na+/H+ antiporter family protein 87130 88443 1
CDS ispF ZP_02642344.1 AC7_2621 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 88619 89089 -1
CDS - ZP_02642345.1 AC7_2620 sortase family protein 89439 90116 1
CDS - ZP_02642346.1 AC7_2619 conserved hypothetical protein 90177 91190 1
CDS - ZP_02642347.1 AC7_2618 RNA pseudouridine synthase family protein 91212 92108 1
CDS - ZP_02642348.1 AC7_2617 conserved hypothetical protein 92370 93311 -1