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Dinoroseobacter shibae DFL 12, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - YP_001531351.1 Dshi_0001 putative oxidoreductase 128 1567 1
CDS - YP_001531352.1 Dshi_0002 glutamate synthase (ferredoxin) 1782 6320 1
CDS - YP_001531354.1 Dshi_0004 hypothetical protein 7257 8114 -1
CDS - YP_001531355.1 Dshi_0005 hypothetical protein 8220 8924 1
CDS dapD YP_001531356.1 Dshi_0006 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 9028 9855 1
CDS - YP_001531358.1 Dshi_0008 hypothetical protein 10683 11255 1
CDS - YP_001531359.1 Dshi_0009 cold-shock DNA-binding domain-containing protein 11747 11953 -1
CDS - YP_001531360.1 Dshi_0010 hypothetical protein 12121 12642 -1
CDS - YP_001531361.1 Dshi_0011 hypothetical protein 12777 13124 1
CDS - YP_001531362.1 Dshi_0012 succinyl-diaminopimelate desuccinylase 13129 14268 1
CDS - YP_001531363.1 Dshi_0013 GCN5-related N-acetyltransferase 14265 14693 1
CDS - YP_001531364.1 Dshi_0014 hypothetical protein 14693 15271 1
CDS - YP_001531365.1 Dshi_0015 ribonuclease R 15472 17727 1
CDS - YP_001531366.1 Dshi_0016 lytic murein transglycosylase 18179 19426 1
CDS - YP_001531367.1 Dshi_0017 hypothetical protein 19516 20166 -1
CDS - YP_001531368.1 Dshi_0018 multicopper oxidase type 2 20326 22629 -1
CDS - YP_001531369.1 Dshi_0019 GTP-binding protein TypA 22866 24683 1
CDS - YP_001531370.1 Dshi_0020 putative transcriptional regulator, CadC 25297 26019 -1
CDS - YP_001531371.1 Dshi_0021 hypothetical protein 25973 26377 -1
CDS - YP_001531372.1 Dshi_0022 hypothetical protein 26400 26954 1
CDS rnhB YP_001531373.1 Dshi_0023 ribonuclease HII 26998 27618 1
CDS - YP_001531374.1 Dshi_0024 DNA methylase N-4/N-6 domain-containing protein 27713 28819 1
CDS - YP_001531375.1 Dshi_0025 anti-ECFsigma factor, ChrR 29143 29814 1
CDS - YP_001531376.1 Dshi_0026 NAD-dependent epimerase/dehydratase 29888 30529 1
CDS - YP_001531377.1 Dshi_0027 alkane 1-monooxygenase 30653 31807 -1
CDS - YP_001531378.1 Dshi_0028 A/G-specific adenine glycosylase 31815 32909 -1
CDS - YP_001531379.1 Dshi_0029 hypothetical protein 32995 33507 1
CDS - YP_001531380.1 Dshi_0030 thiol-disulfide oxidoreductase D, putative 33519 34190 1
CDS lpxK YP_001531381.1 Dshi_0031 tetraacyldisaccharide 4'-kinase 34226 35239 -1
CDS - YP_001531382.1 Dshi_0032 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 35239 36555 -1
CDS - YP_001531383.1 Dshi_0033 hypothetical protein 36716 36907 -1
CDS - YP_001531384.1 Dshi_0034 peptidase S16 lon domain-containing protein 36904 37551 -1
CDS - YP_001531385.1 Dshi_0035 thioredoxin domain-containing protein 37578 38489 -1
CDS - YP_001531386.1 Dshi_0036 exodeoxyribonuclease III Xth 38563 39351 -1
CDS - YP_001531387.1 Dshi_0037 cell wall anchor domain-containing protein 39692 40216 1
CDS - YP_001531388.1 Dshi_0038 two component transcriptional regulator 40432 41118 -1
CDS - YP_001531389.1 Dshi_0039 GTP cyclohydrolase II 41277 42347 1
CDS - YP_001531390.1 Dshi_0040 hypothetical protein 42375 42662 1
CDS - YP_001531391.1 Dshi_0041 hypothetical protein 42669 43163 1
CDS - YP_001531392.1 Dshi_0042 alanine racemase domain-containing protein 43160 43816 -1
CDS - YP_001531393.1 Dshi_0043 hypothetical protein 43903 44862 -1
CDS - YP_001531394.1 Dshi_0044 hypothetical protein 45163 45633 1
CDS - YP_001531395.1 Dshi_0045 UspA domain-containing protein 45640 46014 -1
CDS - YP_001531396.1 Dshi_0046 hypothetical protein 46315 46704 1
CDS - YP_001531397.1 Dshi_0047 hypothetical protein 46984 47406 -1
CDS - YP_001531398.1 Dshi_0048 putative transposase 47483 48445 -1
CDS - YP_001531399.1 Dshi_0049 hypothetical protein 48547 48753 1
CDS - YP_001531400.1 Dshi_0050 hypothetical protein 48750 49232 -1
CDS - YP_001531401.1 Dshi_0051 hypothetical protein 49229 49645 -1
CDS - YP_001531402.1 Dshi_0052 hypothetical protein 49656 49868 -1
CDS - YP_001531403.1 Dshi_0053 hypothetical protein 49943 51163 1
CDS - YP_001531404.1 Dshi_0054 glutathione S-transferase domain-containing protein 51142 51732 -1
CDS - YP_001531405.1 Dshi_0055 DNA polymerase III, delta 51747 52772 -1
CDS - YP_001531406.1 Dshi_0056 hypothetical protein 52769 53263 -1
CDS leuS YP_001531407.1 Dshi_0057 leucyl-tRNA synthetase 53250 55859 -1
CDS - YP_001531408.1 Dshi_0058 outer membrane lipoprotein carrier protein LolA 55941 56645 -1
CDS - YP_001531409.1 Dshi_0059 cell divisionFtsK/SpoIIIE 56686 59673 -1
CDS - YP_001531410.1 Dshi_0060 aminotransferase class I and II 59687 60868 -1
CDS - YP_001531411.1 Dshi_0061 amidase 60992 62323 -1
CDS - YP_001531412.1 Dshi_0062 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 62385 63650 1
CDS - YP_001531413.1 Dshi_0063 inositol-phosphate phosphatase 63773 64567 -1
CDS - YP_001531414.1 Dshi_0064 peptidase U62 modulator of DNA gyrase 64554 65900 -1
CDS - YP_001531415.1 Dshi_0065 hypothetical protein 65978 67468 -1
CDS - YP_001531416.1 Dshi_0066 short-chain dehydrogenase/reductase SDR 67584 68342 1
CDS - YP_001531417.1 Dshi_0067 enoyl-CoA hydratase/isomerase 68339 69085 1
CDS - YP_001531418.1 Dshi_0068 putative lipoprotein 69090 69674 -1
CDS - YP_001531419.1 Dshi_0069 auxin efflux carrier 69751 70632 -1
CDS - YP_001531420.1 Dshi_0070 hemimethylated DNA binding protein 70719 71045 1
CDS - YP_001531421.1 Dshi_0071 gamma-glutamyltransferase 71093 72676 -1
CDS - YP_001531422.1 Dshi_0072 putative anti-sigma regulatory factor, serine/threonine protein kinase 72738 73247 -1
CDS - YP_001531423.1 Dshi_0073 anti-sigma-factor antagonist 73262 73594 -1
CDS - YP_001531424.1 Dshi_0074 acetyl-CoA acetyltransferase 73694 74872 1
CDS - YP_001531425.1 Dshi_0075 hypothetical protein 75136 75378 -1
CDS - YP_001531426.1 Dshi_0076 hypothetical protein 75771 76007 1
CDS - YP_001531427.1 Dshi_0077 hypothetical protein 76020 76910 1
CDS - YP_001531428.1 Dshi_0078 hypothetical protein 76953 77537 1
tRNA - - Dshi_R0001 tRNA-Pro 77867 77943 -1
CDS - YP_001531429.1 Dshi_0079 lipid A biosynthesis acyltransferase 78091 78972 1
CDS - YP_001531430.1 Dshi_0080 hypothetical protein 78969 79955 -1
CDS - YP_001531431.1 Dshi_0081 3-isopropylmalate dehydrogenase 80080 81186 -1
CDS - YP_001531432.1 Dshi_0082 hypothetical protein 81262 82386 -1
CDS leuD YP_001531433.1 Dshi_0083 isopropylmalate isomerase small subunit 82492 83097 -1
CDS - YP_001531434.1 Dshi_0084 hypothetical protein 83135 83662 -1
CDS - YP_001531435.1 Dshi_0085 isopropylmalate isomerase large subunit 83697 85100 -1
CDS - YP_001531436.1 Dshi_0086 SOUL heme-binding protein 85412 86014 1
CDS - YP_001531437.1 Dshi_0087 iojap-like protein 86213 86545 1
CDS - YP_001531438.1 Dshi_0088 hypothetical protein 86564 87034 1
CDS - YP_001531439.1 Dshi_0089 phosphoglyceromutase 87158 88675 1
CDS - YP_001531440.1 Dshi_0090 peptidase M23B 88672 89775 1
CDS - YP_001531441.1 Dshi_0091 carboxyl-terminal protease 89783 91120 1
CDS - YP_001531442.1 Dshi_0092 NUDIX hydrolase 91122 91604 1
CDS - YP_001531443.1 Dshi_0093 hypothetical protein 91896 92264 -1
CDS - YP_001531444.1 Dshi_0094 hypothetical protein 92411 93343 -1
CDS - YP_001531445.1 Dshi_0095 hypothetical protein 93348 94247 -1
CDS - YP_001531446.1 Dshi_0096 hypothetical protein 94244 94774 -1
CDS - YP_001531447.1 Dshi_0097 hypothetical protein 95154 95567 -1
CDS - YP_001531448.1 Dshi_0098 hypothetical protein 95564 96019 -1
CDS - YP_001531449.1 Dshi_0099 hypothetical protein 96161 96931 -1
CDS - YP_001531450.1 Dshi_0100 transposase, putative 96999 98882 -1
CDS - YP_001531451.1 Dshi_0101 hypothetical protein 99281 99538 1