• Summary page

Sequences

• cont1.1, whole genome shotgun sequence
• cont1.2, whole genome shotgun sequence
• cont1.3, whole genome shotgun sequence
• cont1.4, whole genome shotgun sequence
• cont1.5, whole genome shotgun sequence
• cont1.6, whole genome shotgun sequence
• cont1.7, whole genome shotgun sequence
• cont1.8, whole genome shotgun sequence
• cont1.9, whole genome shotgun sequence
• cont1.10, whole genome shotgun sequence
• cont1.11, whole genome shotgun sequence
• cont1.12, whole genome shotgun sequence
• cont1.13, whole genome shotgun sequence
• cont1.14, whole genome shotgun sequence
• cont1.15, whole genome shotgun sequence
• cont1.16, whole genome shotgun sequence
• cont1.17, whole genome shotgun sequence
• cont1.18, whole genome shotgun sequence
• cont1.19, whole genome shotgun sequence
• cont1.20, whole genome shotgun sequence
• cont1.21, whole genome shotgun sequence
• cont1.22, whole genome shotgun sequence
• cont1.23, whole genome shotgun sequence
• cont1.24, whole genome shotgun sequence
• cont1.25, whole genome shotgun sequence
• cont1.26, whole genome shotgun sequence
• cont1.27, whole genome shotgun sequence
• cont1.28, whole genome shotgun sequence
• cont1.29, whole genome shotgun sequence
• cont1.30, whole genome shotgun sequence
• cont1.31, whole genome shotgun sequence
• cont1.32, whole genome shotgun sequence
• cont1.33, whole genome shotgun sequence
• cont1.34, whole genome shotgun sequence
• cont1.35, whole genome shotgun sequence
• cont1.36, whole genome shotgun sequence
• cont1.37, whole genome shotgun sequence
• cont1.38, whole genome shotgun sequence
• cont1.39, whole genome shotgun sequence
• cont1.40, whole genome shotgun sequence
• cont1.41, whole genome shotgun sequence
• cont1.42, whole genome shotgun sequence
• cont1.43, whole genome shotgun sequence
• cont1.44, whole genome shotgun sequence
• cont1.45, whole genome shotgun sequence
• cont1.46, whole genome shotgun sequence
• cont1.47, whole genome shotgun sequence
• cont1.48, whole genome shotgun sequence
• cont1.49, whole genome shotgun sequence
• cont1.50, whole genome shotgun sequence
• cont1.51, whole genome shotgun sequence
• cont1.52, whole genome shotgun sequence
• cont1.53, whole genome shotgun sequence
• cont1.54, whole genome shotgun sequence
• cont1.55, whole genome shotgun sequence
• cont1.56, whole genome shotgun sequence
• cont1.57, whole genome shotgun sequence
• cont1.58, whole genome shotgun sequence
• cont1.59, whole genome shotgun sequence
• cont1.60, whole genome shotgun sequence
• cont1.61, whole genome shotgun sequence
• cont1.62, whole genome shotgun sequence
• cont1.63, whole genome shotgun sequence
• cont1.64, whole genome shotgun sequence
• cont1.65, whole genome shotgun sequence
• cont1.66, whole genome shotgun sequence
• cont1.67, whole genome shotgun sequence
• cont1.68, whole genome shotgun sequence
• cont1.69, whole genome shotgun sequence
• cont1.70, whole genome shotgun sequence
• cont1.71, whole genome shotgun sequence
• cont1.72, whole genome shotgun sequence
• cont1.73, whole genome shotgun sequence
• cont1.74, whole genome shotgun sequence
• cont1.75, whole genome shotgun sequence
• cont1.76, whole genome shotgun sequence
• cont1.77, whole genome shotgun sequence
• cont1.78, whole genome shotgun sequence
• cont1.79, whole genome shotgun sequence
• cont1.80, whole genome shotgun sequence
• cont1.81, whole genome shotgun sequence
• cont1.82, whole genome shotgun sequence
• cont1.83, whole genome shotgun sequence
• cont1.84, whole genome shotgun sequence
• cont1.85, whole genome shotgun sequence
• cont1.86, whole genome shotgun sequence
• cont1.87, whole genome shotgun sequence
• cont1.88, whole genome shotgun sequence
• cont1.89, whole genome shotgun sequence
• cont1.90, whole genome shotgun sequence
• cont1.91, whole genome shotgun sequence
• cont1.92, whole genome shotgun sequence
• cont1.93, whole genome shotgun sequence
• cont1.94, whole genome shotgun sequence
• cont1.95, whole genome shotgun sequence
• cont1.96, whole genome shotgun sequence
• cont1.97, whole genome shotgun sequence
• cont1.98, whole genome shotgun sequence
• cont1.99, whole genome shotgun sequence
• cont1.100, whole genome shotgun sequence
• cont1.101, whole genome shotgun sequence
• cont1.102, whole genome shotgun sequence
• cont1.103, whole genome shotgun sequence
• cont1.104, whole genome shotgun sequence
• cont1.105, whole genome shotgun sequence
• cont1.106, whole genome shotgun sequence
• cont1.107, whole genome shotgun sequence
• cont1.108, whole genome shotgun sequence
• cont1.109, whole genome shotgun sequence
• cont1.110, whole genome shotgun sequence
• cont1.111, whole genome shotgun sequence
• cont1.112, whole genome shotgun sequence
• cont1.113, whole genome shotgun sequence
• cont1.114, whole genome shotgun sequence
• cont1.115, whole genome shotgun sequence
• cont1.116, whole genome shotgun sequence
• cont1.117, whole genome shotgun sequence
• cont1.118, whole genome shotgun sequence
• cont1.119, whole genome shotgun sequence
• cont1.120, whole genome shotgun sequence
• cont1.121, whole genome shotgun sequence
• cont1.122, whole genome shotgun sequence
• cont1.123, whole genome shotgun sequence
• cont1.124, whole genome shotgun sequence
• cont1.125, whole genome shotgun sequence
• cont1.126, whole genome shotgun sequence
• cont1.127, whole genome shotgun sequence
• cont1.128, whole genome shotgun sequence
• cont1.129, whole genome shotgun sequence
• cont1.130, whole genome shotgun sequence
• cont1.131, whole genome shotgun sequence
• cont1.132, whole genome shotgun sequence
• cont1.133, whole genome shotgun sequence
• cont1.134, whole genome shotgun sequence
• cont1.135, whole genome shotgun sequence
• cont1.136, whole genome shotgun sequence
• cont1.137, whole genome shotgun sequence
• cont1.138, whole genome shotgun sequence
• cont1.139, whole genome shotgun sequence
• cont1.140, whole genome shotgun sequence
• cont1.141, whole genome shotgun sequence
• cont1.142, whole genome shotgun sequence
• cont1.143, whole genome shotgun sequence
• cont1.144, whole genome shotgun sequence
• cont1.145, whole genome shotgun sequence
• cont1.146, whole genome shotgun sequence
• cont1.147, whole genome shotgun sequence
• cont1.148, whole genome shotgun sequence
• cont1.149, whole genome shotgun sequence
• cont1.150, whole genome shotgun sequence
• cont1.151, whole genome shotgun sequence
• cont1.152, whole genome shotgun sequence
• cont1.153, whole genome shotgun sequence
• cont1.154, whole genome shotgun sequence
• cont1.155, whole genome shotgun sequence
• cont1.156, whole genome shotgun sequence
• cont1.157, whole genome shotgun sequence
• cont1.158, whole genome shotgun sequence
• cont1.159, whole genome shotgun sequence
• cont1.160, whole genome shotgun sequence
• cont1.161, whole genome shotgun sequence
• cont1.162, whole genome shotgun sequence
• cont1.163, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Erysipelotrichi
» Erysipelotrichales
» Erysipelotrichaceae
» unclassified Erysipelotrichaceae
» unclassified Erysipelotrichaceae (miscellaneous)

Erysipelotrichaceae bacterium 3_1_53

HMPREF0983_01235 - putative ABC transporter, permease protein

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF0983_01235 nucleotide sequence in FASTA format

Retrieve HMPREF0983_01235 protein sequence in FASTA format

Retrieve HMPREF0983_01235 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF0983_01235 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Erysipelotrichi Erysipelotrichales Erysipelotrichaceae unclassified Erysipelotrichaceae unclassified Erysipelotrichaceae (miscellaneous) )

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Annotation

Product:

putative ABC transporter, permease protein

GenBank ID: ZP_07670712.1

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