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Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont4.1, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - HMPREF9348_01283 16S ribosomal RNA 1 459 -1
CDS - ZP_07688528.1 HMPREF9348_01282 hypothetical protein 754 888 1
CDS - ZP_07688529.1 HMPREF9348_01284 ATP-dependent chaperone protein ClpB 930 3515 -1
CDS - ZP_07688530.1 HMPREF9348_01285 conserved hypothetical protein TIGR00726 3633 4364 -1
CDS - ZP_07688531.1 HMPREF9348_01286 pseudouridine synthase, RluA family 4361 5341 -1
CDS - ZP_07688532.1 HMPREF9348_01287 outer membrane assembly lipoprotein YfiO 5476 6213 1
CDS - ZP_07688533.1 HMPREF9348_01288 ribosomal subunit interface protein 6484 6825 1
CDS - ZP_07688534.1 HMPREF9348_01289 chorismate mutase 7075 8235 1
CDS - ZP_07688535.1 HMPREF9348_01290 chorismate mutase 8278 9399 -1
CDS - ZP_07688536.1 HMPREF9348_01291 3-deoxy-7-phosphoheptulonate synthase 9410 10549 -1
CDS - ZP_07688537.1 HMPREF9348_01292 hypothetical protein 10651 11055 1
CDS - ZP_07688538.1 HMPREF9348_01293 hypothetical protein 11205 11723 1
CDS - ZP_07688539.1 HMPREF9348_01294 diguanylate cyclase domain protein 11713 12939 1
CDS - ZP_07688540.1 HMPREF9348_01295 OmpA family protein 12955 13437 1
CDS - ZP_07688541.1 HMPREF9348_01296 ribosomal protein L19 13514 13861 -1
CDS - ZP_07688542.1 HMPREF9348_01297 tRNA (guanine-N1)-methyltransferase 13903 14670 -1
CDS - ZP_07688543.1 HMPREF9348_01298 16S rRNA processing protein RimM 14701 15252 -1
CDS - ZP_07688544.1 HMPREF9348_01299 ribosomal protein S16 15268 15576 -1
CDS - ZP_07688545.1 HMPREF9348_01300 signal recognition particle protein 15765 17126 -1
CDS - ZP_07688546.1 HMPREF9348_01301 cytochrome c assembly protein 17218 18084 1
CDS - ZP_07688547.1 HMPREF9348_01302 transporter associated domain protein 18129 19391 1
CDS - ZP_07688548.1 HMPREF9348_01303 co-chaperone GrpE 19446 20039 -1
CDS - ZP_07688549.1 HMPREF9348_01304 hypothetical protein 20036 20173 -1
CDS - ZP_07688550.1 HMPREF9348_01305 NAD(+)/NADH kinase 20234 21040 1
CDS - ZP_07688551.1 HMPREF9348_01306 DNA repair protein RecN 21126 22787 1
CDS - ZP_07688552.1 HMPREF9348_01307 SmpA / OmlA family protein 22936 23277 1
CDS - ZP_07688553.1 HMPREF9348_01308 putative protein RnfH 23339 23629 -1
CDS - ZP_07688554.1 HMPREF9348_01309 polyketide cyclase/dehydrase 23619 24095 -1
CDS - ZP_07688555.1 HMPREF9348_01310 SsrA-binding protein 24227 24709 1
CDS - ZP_07688556.1 HMPREF9348_01312 site-specific recombinase, phage integrase family 25410 26681 1
CDS - ZP_07688557.1 HMPREF9348_01313 hypothetical protein 26720 27136 1
CDS - ZP_07688558.1 HMPREF9348_01314 hypothetical protein 27208 28974 -1
CDS - ZP_07688559.1 HMPREF9348_01315 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein 28958 30676 -1
CDS - ZP_07688560.1 HMPREF9348_01316 integrase core domain protein 30828 31694 -1
CDS - ZP_07688561.1 HMPREF9348_01317 transposase 31691 31990 -1
CDS - ZP_07688562.1 HMPREF9348_01318 hypothetical protein 32235 32678 -1
CDS - ZP_07688563.1 HMPREF9348_01319 RHS repeat-associated core domain protein 32678 37519 -1
CDS - ZP_07688564.1 HMPREF9348_01320 hypothetical protein 37539 38000 -1
CDS - ZP_07688565.1 HMPREF9348_01321 Rhs element Vgr protein 38028 39965 -1
CDS - ZP_07688566.1 HMPREF9348_01322 hypothetical protein 40191 40337 1
CDS - ZP_07688567.1 HMPREF9348_01323 hypothetical protein 40749 40961 -1
CDS - ZP_07688568.1 HMPREF9348_01324 hypothetical protein 41037 41654 -1
CDS - ZP_07688569.1 HMPREF9348_01325 hypothetical protein 41701 41850 -1
CDS - ZP_07688570.1 HMPREF9348_01326 amino acid permease 41875 43419 1
CDS - ZP_07688571.1 HMPREF9348_01327 PQQ enzyme repeat protein 43534 44496 -1
CDS - ZP_07688572.1 HMPREF9348_01328 hypothetical protein 44706 44840 1
CDS - ZP_07688573.1 HMPREF9348_01329 TonB-dependent siderophore receptor 44837 46939 1
CDS - ZP_07688574.1 HMPREF9348_01330 transcriptional regulator, GntR family 46975 47640 -1
CDS - ZP_07688575.1 HMPREF9348_01331 oxidoreductase, zinc-binding dehydrogenase family protein 47838 48899 -1
CDS - ZP_07688576.1 HMPREF9348_01332 toxin-antitoxin system, toxin component, GNAT family 48993 49574 1
CDS - ZP_07688577.1 HMPREF9348_01333 putative inner membrane protein 49571 50020 1
CDS - ZP_07688578.1 HMPREF9348_01334 hypothetical protein 50021 50254 -1
CDS - ZP_07688579.1 HMPREF9348_01335 hypothetical protein 50340 50495 -1
CDS - ZP_07688580.1 HMPREF9348_01336 hypothetical protein 50496 50711 1
CDS - ZP_07688581.1 HMPREF9348_01337 1-pyrroline dehydrogenase 50900 52324 -1
CDS - ZP_07688582.1 HMPREF9348_01338 ABC transporter, permease protein 52346 53140 -1
CDS - ZP_07688583.1 HMPREF9348_01339 ABC transporter, permease protein 53130 54071 -1
CDS - ZP_07688584.1 HMPREF9348_01340 ABC transporter, ATP-binding protein 54072 55085 -1
CDS - ZP_07688585.1 HMPREF9348_01341 bacterial extracellular solute-binding protein 55103 56248 -1
CDS - ZP_07688586.1 HMPREF9348_01342 hypothetical protein 56493 57104 -1
CDS - ZP_07688587.1 HMPREF9348_01343 transcriptional regulator, GntR family 57077 57898 -1
CDS - ZP_07688588.1 HMPREF9348_01344 toxin-antitoxin system, antitoxin component, HicB family 57977 58414 -1
CDS - ZP_07688589.1 HMPREF9348_01345 toxin-antitoxin system, toxin component, HicA family 58439 58615 -1
CDS - ZP_07688590.1 HMPREF9348_01346 hypothetical protein 58837 59067 1
CDS - ZP_07688591.1 HMPREF9348_01347 peptidase, U32 family 59159 61162 -1
CDS - ZP_07688592.1 HMPREF9348_01348 helix-turn-helix protein 61193 61729 -1
CDS - ZP_07688593.1 HMPREF9348_01349 benzoate transporter 61782 62996 1
CDS - ZP_07688594.1 HMPREF9348_01350 transposase, IS605 OrfB family protein 63036 64244 -1
CDS - ZP_07688595.1 HMPREF9348_01351 transposase like protein 64252 64683 1
CDS - ZP_07688596.1 HMPREF9348_01352 YoaG family protein 64699 64887 -1
CDS - ZP_07688597.1 HMPREF9348_01353 hypothetical protein 64891 65250 -1
CDS - ZP_07688598.1 HMPREF9348_01354 leucine efflux protein 65421 66059 -1
CDS - ZP_07688599.1 HMPREF9348_01355 LysR substrate binding domain protein 66186 67109 -1
CDS - ZP_07688600.1 HMPREF9348_01356 tartrate dehydrogenase 67212 68297 1
CDS - ZP_07688601.1 HMPREF9348_01357 transporter, betaine/carnitine/choline transporter family protein 68548 70158 1
CDS - ZP_07688602.1 HMPREF9348_01358 rieske [2Fe-2S] domain protein 70190 71314 1
CDS - ZP_07688603.1 HMPREF9348_01359 2Fe-2S iron-sulfur cluster binding domain protein 71370 72335 1
CDS - ZP_07688604.1 HMPREF9348_01360 ribonuclease D 72389 73504 -1
CDS - ZP_07688605.1 HMPREF9348_01362 outer membrane lipoprotein, Slp family 75476 76057 -1
CDS - ZP_07688606.1 HMPREF9348_01363 universal bacterial protein YeaZ 76097 76792 -1
CDS - ZP_07688607.1 HMPREF9348_01364 ATP-dependent helicase 76850 78760 -1
CDS - ZP_07688608.1 HMPREF9348_01365 endoribonuclease L-PSP 78844 79236 1
CDS - ZP_07688609.1 HMPREF9348_01366 hypothetical protein 79386 79517 -1
CDS - ZP_07688610.1 HMPREF9348_01367 hypothetical protein 79598 79957 1
CDS - ZP_07688611.1 HMPREF9348_01368 hypothetical protein 80077 80256 -1
CDS - ZP_07688612.1 HMPREF9348_01369 aminodeoxychorismate synthase, component I 80330 81691 1
CDS - ZP_07688613.1 HMPREF9348_01370 hydrolase, NUDIX family 81695 82273 1
CDS - ZP_07688614.1 HMPREF9348_01371 L-serine ammonia-lyase 82523 83821 1
CDS - ZP_07688615.1 HMPREF9348_01372 hypothetical protein 83849 83977 1
CDS - ZP_07688616.1 HMPREF9348_01373 cyclic diguanylate phosphodiesterase domain protein 83952 85550 1
CDS - ZP_07688617.1 HMPREF9348_01374 transporter associated domain protein 85554 87110 -1
CDS - ZP_07688619.1 HMPREF9348_01376 hypothetical protein 87408 87602 -1
CDS - ZP_07688618.1 HMPREF9348_01375 PTS system mannose-specific EIIAB component 87573 88544 1
CDS - ZP_07688620.1 HMPREF9348_01377 mannose permease IIC component 88607 89407 1
CDS - ZP_07688621.1 HMPREF9348_01378 PTS system, mannose/fructose/sorbose family, IID component 89420 90271 1
CDS - ZP_07688622.1 HMPREF9348_01379 hypothetical protein 90326 90784 1
CDS - ZP_07688623.1 HMPREF9348_01380 hypothetical protein 91159 91779 1
CDS - ZP_07688624.1 HMPREF9348_01381 methyltransferase domain protein 91776 92501 -1
CDS - ZP_07688625.1 HMPREF9348_01382 cold shock protein CspE 92751 92960 -1
CDS - ZP_07688626.1 HMPREF9348_01383 hypothetical protein 92973 93116 -1