• Summary page

Sequences

• E_coliMS145-7-1.0.1_Cont0.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont1.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont2.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont3.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont4.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont5.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont6.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont7.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont8.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont9.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont10.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont11.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont12.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont13.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont14.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont15.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont16.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont17.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont18.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont19.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont20.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont21.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont22.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont23.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont24.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont25.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont26.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont27.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont28.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont29.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont30.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont31.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont32.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont33.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont34.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont35.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont36.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont37.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont38.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont39.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont40.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont41.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont42.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont43.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont44.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont45.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont46.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont47.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont48.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont49.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont50.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont51.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont52.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont53.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont54.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont55.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont56.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont57.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont58.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont59.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont60.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont61.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont62.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont63.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont64.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont65.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont66.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont67.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont68.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont69.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont70.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont71.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont72.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont73.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont74.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont75.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont76.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont77.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont78.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont79.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont80.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont81.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont82.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont83.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont84.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont85.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont86.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont87.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont88.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont89.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont90.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont91.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont92.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont93.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont94.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont95.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont96.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont97.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont98.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont99.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont100.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont101.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont102.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont103.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont104.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont105.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont106.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont107.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont108.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont109.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont110.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont111.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont112.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont113.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont114.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont115.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont116.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont117.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont118.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont119.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont120.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont121.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont122.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont123.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont124.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont125.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont126.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont127.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont128.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont129.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont130.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont131.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont132.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont133.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont134.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont135.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont136.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont137.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont138.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont139.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont140.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont141.1, whole genome shotgun sequence
• E_coliMS145-7-1.0.1_Cont143.1, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Proteobacteria
» Gammaproteobacteria
» Enterobacteriales
» Enterobacteriaceae
» Escherichia
» Escherichia coli

Escherichia coli MS 145-7

HMPREF9348_03366 - putative dipeptide ABC transporter, permease protein DppB

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve HMPREF9348_03366 nucleotide sequence in FASTA format

Retrieve HMPREF9348_03366 protein sequence in FASTA format

Retrieve HMPREF9348_03366 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9348_03366 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli )

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Annotation

Product:

putative dipeptide ABC transporter, permease protein DppB

GenBank ID: ZP_07690556.1

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