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Escherichia coli UTI89, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS thrL YP_539042.1 UTI89_C0001 thr operon leader peptide 190 255 1
CDS thrA YP_539043.1 UTI89_C0002 bifunctional aspartokinase I/homeserine dehydrogenase I 336 2798 1
CDS thrB YP_539044.1 UTI89_C0003 homoserine kinase 2800 3732 1
CDS thrC YP_539045.1 UTI89_C0004 threonine synthase 3733 5019 1
CDS yaaX YP_539046.1 UTI89_C0005 hypothetical protein 5233 5529 1
CDS - YP_539047.1 UTI89_C0006 hypothetical protein 5309 5557 -1
CDS yaaA YP_539048.1 UTI89_C0007 hypothetical protein 5569 6345 -1
CDS yaaJ YP_539049.1 UTI89_C0008 putative transporter YaaJ 6415 7845 -1
CDS talB YP_539050.2 UTI89_C0009 transaldolase B 8124 9077 1
CDS mogA YP_539051.1 UTI89_C0010 molybdenum cofactor biosynthesis protein 9189 9779 1
CDS yaaH YP_539052.1 UTI89_C0011 hypothetical protein 9984 10550 -1
CDS yaaW YP_539053.1 UTI89_C0012 hypothetical protein 10699 11412 -1
CDS yaaI YP_539055.1 UTI89_C0014 hypothetical protein 11438 11842 -1
CDS - YP_539056.1 UTI89_C0015 putative glutamate dehydrogenase 12172 14208 -1
CDS dnaK YP_539057.1 UTI89_C0016 molecular chaperone DnaK 12214 14130 1
CDS dnaJ YP_539058.1 UTI89_C0017 chaperone protein DnaJ 14219 15349 1
CDS gef YP_539059.1 UTI89_C0018 gef membrane toxin 15454 15663 -1
CDS - YP_539060.1 UTI89_C0019 hypothetical protein 16218 16979 1
CDS - YP_539061.1 UTI89_C0020 hypothetical protein 16963 18492 1
CDS - YP_539062.1 UTI89_C0021 hypothetical protein 18621 19880 1
CDS nhaA YP_539063.1 UTI89_C0022 pH-dependent sodium/proton antiporter 20115 21281 1
CDS nhaR YP_539064.2 UTI89_C0023 transcriptional activator NhaR 21347 22246 1
CDS - YP_539065.1 UTI89_C0024 hypothetical protein 22258 22590 1
CDS rpsT YP_539066.1 UTI89_C0025 30S ribosomal protein S20 22342 22605 -1
CDS yaaY YP_539067.1 UTI89_C0026 hypothetical protein 22708 22926 1
CDS ribF YP_539068.1 UTI89_C0027 bifunctional riboflavin kinase/FMN adenylyltransferase 22934 23875 1
CDS ileS YP_539069.1 UTI89_C0028 isoleucyl-tRNA synthetase 23918 26734 1
CDS lspA YP_539070.1 UTI89_C0029 lipoprotein signal peptidase 26734 27228 1
CDS slpA YP_539071.1 UTI89_C0030 FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) 27336 27785 1
CDS ispH YP_539072.1 UTI89_C0031 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 27787 28737 1
CDS yaaF YP_539073.1 UTI89_C0032 ribonucleoside hydrolase RihC 28803 29717 1
CDS - YP_539074.1 UTI89_C0033 hypothetical protein 29740 30105 1
CDS dapB YP_539075.1 UTI89_C0034 dihydrodipicolinate reductase 30266 31087 1
CDS - YP_539076.1 UTI89_C0035 hypothetical protein 31099 31296 -1
CDS carA YP_539077.1 UTI89_C0036 carbamoyl phosphate synthase small subunit 31516 32691 1
CDS carB YP_539078.1 UTI89_C0037 carbamoyl phosphate synthase large subunit 32709 35930 1
CDS - YP_539079.1 UTI89_C0038 transposase 36103 36612 1
CDS - YP_539080.1 UTI89_C0039 hypothetical protein 36649 36867 -1
CDS caiF YP_539081.2 UTI89_C0040 DNA-binding transcriptional activator CaiF 36902 37297 1
CDS caiE YP_539082.1 UTI89_C0041 carnitine operon protein CaiE 37416 38027 -1
CDS caiD YP_539083.1 UTI89_C0042 carnitinyl-CoA dehydratase 38012 38905 -1
CDS caiC YP_539084.1 UTI89_C0043 putative crotonobetaine/carnitine-CoA ligase 38906 40474 -1
CDS caiB YP_539085.1 UTI89_C0044 crotonobetainyl-CoA:carnitine CoA-transferase 40532 41749 -1
CDS caiA YP_539086.1 UTI89_C0045 crotonobetainyl-CoA dehydrogenase 41877 43019 -1
CDS caiT YP_539087.1 UTI89_C0046 L-carnitine/gamma-butyrobetaine antiporter 43050 44564 -1
CDS fixA YP_539088.2 UTI89_C0047 putative electron transfer flavoprotein FixA 45037 45807 1
CDS fixB YP_539089.1 UTI89_C0048 putative electron transfer flavoprotein FixB 45822 46763 1
CDS fixC YP_539090.1 UTI89_C0049 putative oxidoreductase FixC 46814 48100 1
CDS fixX YP_539091.1 UTI89_C0050 putative ferredoxin 48097 48384 1
CDS yaaU YP_539092.1 UTI89_C0051 metabolite transport protein YaaU 48443 49774 1
CDS yabF YP_539093.1 UTI89_C0052 glutathione-regulated potassium-efflux system ancillary protein KefF 49882 50412 1
CDS kefC YP_539094.1 UTI89_C0053 glutathione-regulated potassium-efflux system protein KefC 50405 52267 1
CDS folA YP_539095.1 UTI89_C0054 dihydrofolate reductase 52324 52938 1
CDS - YP_539096.1 UTI89_C0055 putative antitoxin of gyrase inhibiting toxin-antitoxin system 53024 53257 1
CDS apaH YP_539097.1 UTI89_C0056 diadenosine tetraphosphatase 53572 54420 -1
CDS apaG YP_539098.1 UTI89_C0057 ApaG 54427 54804 -1
CDS ksgA YP_539099.1 UTI89_C0058 dimethyladenosine transferase 54807 55628 -1
CDS pdxA YP_539100.1 UTI89_C0059 4-hydroxythreonine-4-phosphate dehydrogenase 55625 56614 -1
CDS surA YP_539101.1 UTI89_C0060 peptidyl-prolyl cis-trans isomerase SurA 56614 57900 -1
CDS imp YP_539102.1 UTI89_C0061 organic solvent tolerance protein 57953 60307 -1
CDS djlA YP_539103.2 UTI89_C0062 Dna-J like membrane chaperone protein 60562 61377 1
CDS rluA YP_539104.1 UTI89_C0063 23S rRNA/tRNA pseudouridine synthase A 61527 62186 -1
CDS hepA YP_539105.1 UTI89_C0064 ATP-dependent helicase HepA 62198 65104 -1
CDS polB YP_539106.1 UTI89_C0065 DNA polymerase II 65268 67619 -1
CDS araD YP_539107.1 UTI89_C0066 L-ribulose-5-phosphate 4-epimerase 67694 68389 -1
CDS araA YP_539108.1 UTI89_C0067 L-arabinose isomerase 68674 70176 -1
CDS araB YP_539109.1 UTI89_C0068 ribulokinase 70187 71887 -1
CDS araC YP_539110.1 UTI89_C0069 DNA-binding transcriptional regulator AraC 72175 73071 1
CDS - YP_539111.1 UTI89_C0070 hypothetical protein 73336 73458 1
CDS - YP_539112.1 UTI89_C0071 hypothetical protein 73583 74194 1
CDS - YP_539113.1 UTI89_C0072 hypothetical protein 74440 74862 1
CDS yabI YP_539114.1 UTI89_C0073 putative integral membrane protein YabI 75017 75781 1
CDS thiQ YP_539115.1 UTI89_C0074 thiamine transporter ATP-binding subunit 75895 76614 -1
CDS thiP YP_539116.1 UTI89_C0075 thiamine transporter membrane protein 76577 78187 -1
CDS tbpA YP_539117.2 UTI89_C0076 thiamine transporter substrate binding subunit 78163 79146 -1
CDS yabN YP_539118.1 UTI89_C0077 transcriptional regulator SgrR 79310 80986 -1
CDS leuD YP_539119.1 UTI89_C0078 isopropylmalate isomerase small subunit 81293 81898 -1
CDS leuC YP_539120.1 UTI89_C0079 isopropylmalate isomerase large subunit 81909 83309 -1
CDS leuB YP_539121.1 UTI89_C0080 3-isopropylmalate dehydrogenase 83312 84406 -1
CDS leuA YP_539122.1 UTI89_C0081 2-isopropylmalate synthase 84403 85974 -1
CDS leuL YP_539123.1 UTI89_C0082 leu operon leader peptide 86066 86152 -1
CDS - YP_539124.1 UTI89_C0083 hypothetical protein 86611 86733 1
CDS leuO YP_539125.1 UTI89_C0084 leucine transcriptional activator 86810 87754 1
CDS ilvI YP_539126.2 UTI89_C0085 acetolactate synthase 3 catalytic subunit 88072 89796 1
CDS ilvH YP_539127.2 UTI89_C0086 acetolactate synthase 3 regulatory subunit 89799 90290 1
CDS fruL YP_539128.1 UTI89_C0087 FruR leader peptide 90293 90388 1
CDS - YP_539129.1 UTI89_C0088 hypothetical protein 90342 90473 1
CDS fruR YP_539130.1 UTI89_C0089 DNA-binding transcriptional regulator FruR 90470 91474 1
CDS mraZ YP_539131.1 UTI89_C0090 cell division protein MraZ 92040 92534 1
CDS mraW YP_539132.1 UTI89_C0091 S-adenosyl-methyltransferase MraW 92536 93477 1
CDS ftsL YP_539133.1 UTI89_C0092 cell division protein FtsL 93474 93839 1
CDS ftsI YP_539134.1 UTI89_C0093 peptidoglycan synthetase FtsI precursor 93855 95621 1
CDS murE YP_539135.1 UTI89_C0094 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 95608 97095 1
CDS murF YP_539136.1 UTI89_C0095 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 97092 98450 1
CDS mraY YP_539137.1 UTI89_C0096 phospho-N-acetylmuramoyl-pentapeptide- transferase 98444 99526 1
CDS murD YP_539138.1 UTI89_C0097 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 99529 100845 1
CDS ftsW YP_539139.1 UTI89_C0098 cell division protein FtsW 100842 102089 1
CDS murG YP_539140.1 UTI89_C0099 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 102086 103153 1
CDS murC YP_539141.1 UTI89_C0100 UDP-N-acetylmuramate--L-alanine ligase 103207 104682 1
CDS ddl YP_539142.1 UTI89_C0101 D-alanine--D-alanine ligase 104675 105595 1