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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05435617.1 E4_010100000140 hypothetical protein 1 169 1
CDS - ZP_05435618.1 E4_010100000145 predicted 4Fe-4S cluster-containing protein 656 916 -1
CDS - ZP_05435619.1 E4_010100000150 putative DNA-binding transcriptional regulator 972 1820 -1
CDS - ZP_05435620.1 E4_010100000155 hypothetical protein 2029 2664 1
CDS - ZP_05435621.1 E4_010100000160 tRNA-specific adenosine deaminase 2722 3225 1
CDS - ZP_05435622.1 E4_010100000165 putative transglycosylase 3222 4778 -1
CDS - ZP_05435623.1 E4_010100000170 phosphoribosylformylglycinamidine synthase 5036 8923 1
CDS - ZP_05435624.1 E4_010100000175 putative sensory kinase in two-component system 9526 10908 1
CDS - ZP_05435625.1 E4_010100000180 hypothetical protein 11073 11786 1
CDS - ZP_05435626.1 E4_010100000185 DNA-binding response regulator in two-component regulatory system with QseE 11776 13110 1
CDS - ZP_05435627.1 E4_010100000190 nitrogen regulatory protein P-II 1 13171 13509 1
CDS - ZP_05435628.1 E4_010100000195 nitric oxide dioxygenase 13554 14744 -1
CDS glyA ZP_05435629.1 E4_010100000200 serine hydroxymethyltransferase 15072 16325 1
CDS - ZP_05435630.1 E4_010100000205 putative DNA-binding transcriptional regulator 16523 17716 -1
CDS - ZP_05435631.1 E4_010100000210 hypothetical protein 17834 21115 1
CDS - ZP_05435632.1 E4_010100000215 putative sugar transporter subunit: periplasmic-binding component of ABC superfamily protein 21212 22195 1
CDS - ZP_05435633.1 E4_010100000220 fused putative sugar transporter subunits of ABC superfamily: ATP-binding components 22218 23729 1
CDS - ZP_05435634.1 E4_010100000225 predicted sugar transporter subunit: membrane component of ABC superfamily protein 23754 24752 1
CDS - ZP_05435635.1 E4_010100000230 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 24785 25879 1
CDS - ZP_05435636.1 E4_010100000235 hypothetical protein 25891 26763 1
CDS - ZP_05435637.1 E4_010100000240 hypothetical protein 26811 27278 -1
CDS - ZP_05435638.1 E4_010100000245 phenylpropionate dioxygenase ferredoxin reductase subunit 27330 28532 -1
CDS - ZP_05435639.1 E4_010100000250 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 28542 29354 -1
CDS - ZP_05435640.1 E4_010100000255 3-phenylpropionate dioxygenase ferredoxin subunit 29351 29671 -1
CDS - ZP_05435641.1 E4_010100000260 3-phenylpropionate dioxygenase subunit beta 29671 30189 -1
CDS - ZP_05435642.1 E4_010100000265 3-phenylpropionate dioxygenase, large (alpha) subunit 30186 31547 -1
CDS - ZP_05435643.1 E4_010100000270 DNA-binding transcriptional regulator HcaR 31683 32573 1
CDS - ZP_05435644.1 E4_010100000275 putative 3-phenylpropionic acid transporter 32733 33872 1
CDS - ZP_05435645.1 E4_010100000280 stationary phase inducible protein CsiE 33864 35144 -1
CDS - ZP_05435646.1 E4_010100000285 putative peptidase 35335 36189 -1
CDS - ZP_05435647.1 E4_010100000290 inositol monophosphatase 36334 37137 -1
CDS - ZP_05435648.1 E4_010100000295 predicted methyltransferase 37256 37996 1
CDS - ZP_05435649.1 E4_010100000300 DNA-binding transcriptional regulator IscR 38448 38936 1
CDS - ZP_05435650.1 E4_010100000305 cysteine desulfurase 39048 40262 1
CDS - ZP_05435651.1 E4_010100000310 scaffold protein 40290 40676 1
CDS iscA ZP_05435652.1 E4_010100000315 iron-sulfur cluster assembly protein 40693 41016 1
CDS hscB ZP_05435653.1 E4_010100000320 co-chaperone HscB 41112 41627 1
CDS hscA ZP_05435654.1 E4_010100000325 chaperone protein HscA 41644 43494 1
CDS - ZP_05435655.1 E4_010100000330 [2Fe-2S] ferredoxin 43496 43831 1
CDS - ZP_05435656.1 E4_010100000335 hypothetical protein 43843 44043 1
CDS - ZP_05435657.1 E4_010100000340 aminopeptidase B 44221 45504 1
CDS - ZP_05435658.1 E4_010100000345 enhanced serine sensitivity protein SseB 45646 46422 1
CDS sseA ZP_05435659.1 E4_010100000350 3-mercaptopyruvate sulfurtransferase 47239 48084 -1
CDS - ZP_05435660.1 E4_010100000365 penicillin-binding protein 1C 53252 55564 1
CDS ndk ZP_05435661.1 E4_010100000370 nucleoside diphosphate kinase 55713 56144 1
CDS - ZP_05435662.1 E4_010100000375 hypothetical protein 56294 57448 1
CDS - ZP_05435663.1 E4_010100000380 cytoskeletal protein RodZ 57733 58746 1
CDS ispG ZP_05435664.1 E4_010100000385 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 58773 59891 1
CDS hisS ZP_05435665.1 E4_010100000390 histidyl-tRNA synthetase 60002 61276 1
CDS - ZP_05435666.1 E4_010100000395 hypothetical protein 61294 61914 1
CDS - ZP_05435667.1 E4_010100000400 outer membrane protein assembly complex subunit YfgL 61925 63103 1
CDS engA ZP_05435668.1 E4_010100000405 GTP-binding protein EngA 63221 64693 1
CDS - ZP_05435669.1 E4_010100000410 hypothetical protein 64763 64978 1
CDS xseA ZP_05435670.1 E4_010100000415 exodeoxyribonuclease VII large subunit 64975 66345 -1
CDS - ZP_05435671.1 E4_010100000420 inosine 5'-monophosphate dehydrogenase 66507 67973 1
CDS guaA ZP_05435672.1 E4_010100000425 GMP synthase 68042 69619 1
CDS - ZP_05435673.1 E4_010100000430 hypothetical protein 69712 70251 -1
CDS - ZP_05435674.1 E4_010100000435 17 kDa surface antigen 70267 70782 -1
CDS - ZP_05435675.1 E4_010100000440 hypothetical protein 71305 71457 1
CDS - ZP_05435676.1 E4_010100000445 putative inner membrane protein 71639 73882 1
CDS - ZP_05435677.1 E4_010100000450 exopolyphosphatase 73921 75462 -1
CDS - ZP_05435678.1 E4_010100000455 polyphosphate kinase 75467 77533 -1
CDS purN ZP_05435679.1 E4_010100000460 phosphoribosylglycinamide formyltransferase 77705 78343 -1
CDS - ZP_05435680.1 E4_010100000465 phosphoribosylaminoimidazole synthetase 78343 79380 -1
CDS upp ZP_05435681.1 E4_010100000470 uracil phosphoribosyltransferase 79705 80331 1
CDS - ZP_05435682.1 E4_010100000475 uracil transporter 80417 81706 1
CDS - ZP_05435683.1 E4_010100000480 DNA replication initiation factor 81756 82502 1
CDS - ZP_05435684.1 E4_010100000485 putative oxidoreductase 82640 82999 -1
CDS - ZP_05435685.1 E4_010100000490 predicted peptidase 83020 84483 -1
CDS - ZP_05435686.1 E4_010100000495 predicted inner membrane protein 84696 85757 1
CDS focB ZP_05435687.1 E4_010100000500 putative formate transporter 85795 86643 -1
CDS - ZP_05435688.1 E4_010100000505 DNA-binding transcriptional activator, formate sensing 86665 88677 -1
CDS - ZP_05435689.1 E4_010100000510 putative processing element hydrogenase 4 88707 89120 -1
CDS - ZP_05435690.1 E4_010100000515 hydrogenase 4, Fe-S subunit 89113 89871 -1
CDS - ZP_05435691.1 E4_010100000520 hydrogenase 4 subunit H 89868 90413 -1
CDS - ZP_05435692.1 E4_010100000525 hydrogenase 4, subunit 90423 92090 -1
CDS - ZP_05435693.1 E4_010100000530 hydrogenase 4 subunit F 92080 93660 -1
CDS hyfE ZP_05435694.1 E4_010100000535 hydrogenase 4 membrane subunit 93665 94315 -1
CDS - ZP_05435695.1 E4_010100000540 hydrogenase 4 subunit D 94327 95766 -1
CDS - ZP_05435696.1 E4_010100000545 hydrogenase 4 membrane subunit 95783 96730 -1
CDS - ZP_05435697.1 E4_010100000550 hydrogenase 4 subunit B 96741 98759 -1
CDS - ZP_05435698.1 E4_010100000555 hydrogenase 4, 4Fe-4S subunit 98759 99376 -1
CDS bcp ZP_05435699.1 E4_010100000560 thioredoxin-dependent thiol peroxidase 99629 100099 -1
CDS gcvR ZP_05435700.1 E4_010100000565 glycine cleavage system transcriptional repressor 100099 100671 -1
CDS - ZP_05435701.1 E4_010100000570 dihydrodipicolinate synthase 100817 101695 1
CDS - ZP_05435702.1 E4_010100000575 lipoprotein 101712 102746 1
CDS - ZP_05435703.1 E4_010100000580 phosphoribosylaminoimidazole-succinocarboxamide synthase 102959 103672 1
CDS - ZP_05435704.1 E4_010100000585 hypothetical protein 103909 104703 1
CDS - ZP_05435705.1 E4_010100000590 predicted hydrolase 104718 106733 1
CDS - ZP_05435706.1 E4_010100000595 esterase YpfH 106807 107505 1
CDS - ZP_05435707.1 E4_010100000600 hypothetical protein 107615 107815 -1
CDS - ZP_05435708.1 E4_010100000605 succinyl-diaminopimelate desuccinylase 107843 108970 -1
CDS - ZP_05435709.1 E4_010100000610 hypothetical protein 108974 109330 -1
CDS - ZP_05435710.1 E4_010100000615 aminoglycoside/multidrug efflux system 109869 112982 -1
CDS - ZP_05435711.1 E4_010100000620 nitrate/nitrite sensor protein NarQ 113146 114846 -1
CDS - ZP_05435712.1 E4_010100000625 putative oxidoreductase Fe-S binding subunit 115052 117031 1
CDS - ZP_05435713.1 E4_010100000630 predicted NUDIX hydrolase 117099 117674 1
CDS - ZP_05435714.1 E4_010100000635 hypothetical protein 117800 118843 1
CDS - ZP_05435715.1 E4_010100000640 transketolase 118938 120941 -1
CDS - ZP_05435716.1 E4_010100000645 transaldolase A 120961 121911 -1