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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - E4_010100t01932 tRNA-Val 5 80 -1
tRNA - - E4_010100t01934 tRNA-Val 127 202 -1
tRNA - - E4_010100t01936 tRNA-Val 247 322 -1
CDS gltX ZP_05435769.1 E4_010100000910 glutamyl-tRNA synthetase 581 1996 1
CDS - ZP_05435770.1 E4_010100000915 predicted DNA-binding transcriptional regulator 2048 2440 -1
CDS - ZP_05435771.1 E4_010100000920 hypothetical protein 2442 2786 -1
tRNA - - E4_010100t01938 tRNA-Ala 3022 3097 1
tRNA - - E4_010100t01940 tRNA-Ala 3137 3212 1
CDS - ZP_05435772.1 E4_010100000925 putative diguanylate cyclase 3421 5610 1
CDS - ZP_05435773.1 E4_010100000930 nucleoside (except guanosine) transporter 5660 6862 -1
CDS - ZP_05435774.1 E4_010100000935 manganese transport protein MntH 7261 8436 1
CDS - ZP_05435775.1 E4_010100000940 hypothetical protein 8577 8903 -1
CDS - ZP_05435776.1 E4_010100000945 hypothetical protein 9018 10274 -1
CDS glk ZP_05435777.1 E4_010100000950 glucokinase 10478 11443 1
CDS - ZP_05435778.1 E4_010100000955 predicted enzyme IIB component of PTS 11662 11988 1
CDS - ZP_05435779.1 E4_010100000960 predicted enzyme IIC component of PTS 12010 13257 1
CDS - ZP_05435780.1 E4_010100000965 aminopeptidase 13272 14357 1
CDS - ZP_05435781.1 E4_010100000970 exoaminopeptidase 14357 15394 1
CDS - ZP_05435782.1 E4_010100000975 fused putative PTS enzymes: Hpr component/enzyme I component/enzyme IIA component 15419 17914 1
CDS - ZP_05435783.1 E4_010100000980 putative DNA-binding protein 17917 18774 -1
CDS - ZP_05435784.1 E4_010100000985 predicted response regulator in two-component system withYpdA 18787 19521 -1
CDS - ZP_05435785.1 E4_010100000990 sensor histidine kinase 19536 21215 -1
CDS - ZP_05435786.1 E4_010100000995 aminotransferase 21609 22847 1
CDS - ZP_05435787.1 E4_010100001000 lipid A biosynthesis palmitoleoyl acyltransferase 23339 24259 -1
CDS - ZP_05435788.1 E4_010100001005 putative inner membrane protein 24612 24854 1
CDS - ZP_05435789.1 E4_010100001010 putative lipoprotein involved in colanic acid biosynthesis 24931 25206 -1
CDS - ZP_05435790.1 E4_010100001015 hypothetical protein 25502 26137 1
CDS - ZP_05435791.1 E4_010100001020 formyl-coenzyme A transferase 26650 27900 1
CDS - ZP_05435792.1 E4_010100001025 putative oxalyl-CoA decarboxylase 27954 29648 1
CDS - ZP_05435793.1 E4_010100001030 putative transporter YfdV 29718 30662 1
CDS - ZP_05435794.1 E4_010100001035 hypothetical protein 30736 31881 1
CDS - ZP_05435795.1 E4_010100001040 hybrid sensory histidine kinase in two-component regulatory system with EvgA 31937 35530 -1
CDS - ZP_05435796.1 E4_010100001045 DNA-binding transcriptional activator EvgA 35535 36149 -1
CDS - ZP_05435797.1 E4_010100001050 EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component 36565 37728 1
CDS - ZP_05435798.1 E4_010100001055 putative multidrug efflux system 37728 39266 1
CDS - ZP_05435799.1 E4_010100001060 D-serine dehydratase 39374 40702 -1
CDS - ZP_05435800.1 E4_010100001065 permease DsdX 40720 42057 -1
CDS - ZP_05435801.1 E4_010100001070 DNA-binding transcriptional regulator DsdC 42275 43210 1
CDS - ZP_05435802.1 E4_010100001075 response regulator inhibitor for tor operon 43394 43594 -1
CDS - ZP_05435803.1 E4_010100001080 hypothetical protein 43726 43905 -1
CDS - ZP_05435804.1 E4_010100001085 Eaa protein 44002 44631 -1
CDS - ZP_05435805.1 E4_010100001090 hypothetical protein 44633 45040 -1
CDS - ZP_05435806.1 E4_010100001095 hypothetical protein 45042 45341 -1
CDS - ZP_05435807.1 E4_010100001100 hypothetical protein 45338 45505 -1
CDS - ZP_05435808.1 E4_010100001105 hypothetical protein 45522 45836 -1
CDS - ZP_05435809.1 E4_010100001110 hypothetical protein 45848 46330 -1
CDS - ZP_05435810.1 E4_010100001115 putative phage-related DNA recombination protein 46314 47216 -1
CDS - ZP_05435811.1 E4_010100001120 hypothetical protein 47213 47521 -1
CDS - ZP_05435812.1 E4_010100001125 hypothetical protein 47502 47609 -1
CDS - ZP_05435813.1 E4_010100001130 predicted host-killing protein 47606 47758 -1
CDS - ZP_05435814.1 E4_010100001135 predicted reguratory protein 47743 47877 -1
CDS - ZP_05435815.1 E4_010100001140 hypothetical protein 47877 48389 -1
CDS - ZP_05435816.1 E4_010100001145 hypothetical protein 48602 49072 -1
CDS - ZP_05435817.1 E4_010100001150 Probable regulatory protein N (early gene regulator) 49081 49377 -1
CDS - ZP_05435818.1 E4_010100001155 hypothetical protein 49641 49748 1
CDS - ZP_05435819.1 E4_010100001160 hypothetical protein 49745 50113 -1
CDS - ZP_05435820.1 E4_010100001165 phage repressor protein 50133 50849 -1
CDS - ZP_05435821.1 E4_010100001170 regulatory protein cro 50956 51150 1
CDS - ZP_05435822.1 E4_010100001175 Transcriptional activator protein C1 (modular protein) 51259 51537 1
CDS - ZP_05435823.1 E4_010100001180 hypothetical protein 51572 51718 1
CDS - ZP_05435824.1 E4_010100001185 gp59 51711 52376 1
CDS - ZP_05435825.1 E4_010100001190 DNA transfer protein from phage 52524 54365 1
CDS - ZP_05435826.1 E4_010100001195 hypothetical protein 54390 54779 -1
CDS - ZP_05435827.1 E4_010100001200 hypothetical protein 54795 55130 -1
CDS - ZP_05435828.1 E4_010100001205 Mnt 55127 55381 -1
CDS - ZP_05435829.1 E4_010100001210 hypothetical protein 55490 55633 1
CDS - ZP_05435830.1 E4_010100001215 putative antirepressor protein encoded by prophage CP-933N 55702 56580 1
CDS - ZP_05435831.1 E4_010100001220 putative head-binding domain of phage tailspike protein 56681 59047 1
CDS - ZP_05435832.1 E4_010100001225 hexapaptide repeat-containing transferase 59067 59723 -1
CDS - ZP_05435833.1 E4_010100001230 CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase 59931 61088 -1
tRNA - - E4_010100t01942 tRNA-Arg 61250 61324 -1
CDS - ZP_05435834.1 E4_010100001235 putative inner membrane protein 61400 62332 -1
CDS - ZP_05435835.1 E4_010100001240 predicted lipoprotein 62626 63381 1
CDS - ZP_05435836.1 E4_010100001245 hypothetical protein 63563 64621 -1
CDS - ZP_05435837.1 E4_010100001250 long-chain fatty acid outer membrane transporter 64987 66327 -1
CDS - ZP_05435838.1 E4_010100001255 hypothetical protein 66699 66983 1
CDS fadI ZP_05435839.1 E4_010100001260 3-ketoacyl-CoA thiolase 67164 68474 1
CDS fadJ ZP_05435840.1 E4_010100001265 multifunctional fatty acid oxidation complex subunit alpha 68474 70618 1
CDS - ZP_05435841.1 E4_010100001270 phosphohistidine phosphatase 70821 71306 1
CDS - ZP_05435842.1 E4_010100001275 predicted fimbrial-like adhesin protein 71987 72550 1
CDS - ZP_05435843.1 E4_010100001280 predicted outer membrane export usher protein 72632 75277 1
CDS - ZP_05435844.1 E4_010100001285 putative periplasmic pilus chaperone 75297 76049 1
CDS - ZP_05435845.1 E4_010100001290 putative fimbrial-like adhesin protein 76064 76561 1
CDS - ZP_05435846.1 E4_010100001295 putative fimbrial-like adhesin protein 76558 77046 1
CDS - ZP_05435847.1 E4_010100001300 putative fimbrial-like adhesin protein 77043 77582 1
CDS - ZP_05435848.1 E4_010100001305 hypothetical protein 77584 78405 1
CDS - ZP_05435849.1 E4_010100001310 hypothetical protein 78476 79027 -1
CDS - ZP_05435850.1 E4_010100001315 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 79193 80125 1
CDS - ZP_05435851.1 E4_010100001320 chorismate synthase 80160 81245 1
CDS mepA ZP_05435852.1 E4_010100001325 penicillin-insensitive murein endopeptidase 81249 82073 1
CDS - ZP_05435853.1 E4_010100001330 hypothetical protein 82073 82882 1
CDS - ZP_05435854.1 E4_010100001335 hypothetical protein 82882 83430 1
CDS - ZP_05435855.1 E4_010100001340 hypothetical protein 83464 83742 1
CDS mnmC ZP_05435856.1 E4_010100001345 5-methylaminomethyl-2-thiouridine methyltransferase 83863 85869 -1
CDS - ZP_05435857.1 E4_010100001350 3-oxoacyl-(acyl carrier protein) synthase I 86028 87248 1
CDS - ZP_05435858.1 E4_010100001355 hypothetical protein 87513 88691 1
CDS flk ZP_05435859.1 E4_010100001360 flagella biosynthesis regulator 88688 89683 -1
CDS - ZP_05435860.1 E4_010100001365 erythronate-4-phosphate dehydrogenase 89782 90918 1
CDS - ZP_05435861.1 E4_010100001370 putative semialdehyde dehydrogenase 90984 91997 1
CDS truA ZP_05435862.1 E4_010100001375 tRNA pseudouridine synthase A 91997 92809 1