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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05435973.1 E4_010100001942 ecotin 44 532 -1
CDS - ZP_05435974.1 E4_010100001947 hypothetical protein 667 840 -1
CDS - ZP_05435975.1 E4_010100001952 ferredoxin-type protein 940 1434 1
CDS - ZP_05435976.1 E4_010100001957 assembly protein for periplasmic nitrate reductase 1424 1687 1
CDS - ZP_05435977.1 E4_010100001962 nitrate reductase catalytic subunit 1684 4170 1
CDS napG ZP_05435978.1 E4_010100001967 quinol dehydrogenase periplasmic component 4177 4872 1
CDS napH ZP_05435979.1 E4_010100001972 quinol dehydrogenase membrane component 4859 5722 1
CDS napB ZP_05435980.1 E4_010100001977 citrate reductase cytochrome c-type subunit 5719 6168 1
CDS - ZP_05435981.1 E4_010100001982 cytochrome c-type protein NapC 6178 6780 1
CDS - ZP_05435982.1 E4_010100001987 cytochrome c biogenesis protein CcmA 6799 7416 1
CDS - ZP_05435983.1 E4_010100001992 heme exporter subunit, membrane component of ABC superfamily protein 7413 8075 1
CDS - ZP_05435984.1 E4_010100001997 heme exporter protein C 8117 8854 1
CDS - ZP_05435985.1 E4_010100002002 cytochrome c biogenesis protein 8851 9060 1
CDS - ZP_05435986.1 E4_010100002007 cytochrome c-type biogenesis protein CcmE 9057 9536 1
CDS - ZP_05435987.1 E4_010100002012 heme lyase, CcmF subunit 9533 11476 1
CDS - ZP_05435988.1 E4_010100002017 periplasmic thioredoxin of cytochrome c-type biogenesis 11473 12030 1
CDS - ZP_05435989.1 E4_010100002022 heme lyase, CcmH subunit 12027 13079 1
CDS - ZP_05435990.1 E4_010100002027 transcriptional regulator NarP 13290 13937 -1
CDS - ZP_05435991.1 E4_010100002032 Pertactin 14257 16848 1
tRNA - - E4_010100t02689 tRNA-Pro 16951 17027 -1
CDS - ZP_05435992.1 E4_010100002037 predicted hydrolase, inner membrane 17102 18862 -1
CDS - ZP_05435993.1 E4_010100002042 hypothetical protein 18882 19109 -1
CDS - ZP_05435994.1 E4_010100002047 nucleoid-associated protein NdpA 19291 20298 1
CDS - ZP_05435995.1 E4_010100002052 50S ribosomal protein L25 20437 20721 -1
CDS - ZP_05435996.1 E4_010100002057 predicted ATP-dependet helicase 20846 22606 -1
CDS - ZP_05435997.1 E4_010100002062 16S rRNA pseudouridylate synthase A 22755 23450 1
CDS - ZP_05435998.1 E4_010100002067 bicyclomycin/multidrug efflux system 23478 24668 1
CDS - ZP_05435999.1 E4_010100002072 hypothetical protein 25001 25345 1
CDS - ZP_05436000.1 E4_010100002077 fused putative oligopeptide transporter subunits of ABC superfamilly: ATP-binding components 25349 26938 -1
CDS - ZP_05436001.1 E4_010100002082 predicted oligopeptide transporter subunit 26940 27965 -1
CDS - ZP_05436002.1 E4_010100002087 predicted oligopeptide transporter subunit; membrane component of ABC superfamily protein 27965 29059 -1
CDS - ZP_05436003.1 E4_010100002092 putative oligopeptide transporter subunit 29060 30874 -1
CDS - ZP_05436004.1 E4_010100002097 hypothetical protein 30956 32512 -1
CDS spr ZP_05436005.1 E4_010100002102 putative outer membrane lipoprotein 32693 33259 -1
CDS - ZP_05436006.1 E4_010100002107 hypothetical protein 33671 34384 -1
CDS - ZP_05436007.1 E4_010100002112 predicted enzyme 34423 35409 -1
CDS - ZP_05436008.1 E4_010100002117 predicted dehydrogenase, NAD-dependent 35527 36993 -1
CDS - ZP_05436009.1 E4_010100002122 elongation factor P 37216 37788 -1
CDS - ZP_05436010.1 E4_010100002127 hypothetical protein 37943 38197 1
CDS - ZP_05436011.1 E4_010100002132 lactose/glucose efflux system 38194 39375 -1
CDS - ZP_05436012.1 E4_010100002137 bifunctional fructose-specific PTS IIA/HPr protein 39743 40873 1
CDS fruK ZP_05436013.1 E4_010100002142 1-phosphofructokinase 40873 41811 1
CDS - ZP_05436014.1 E4_010100002147 fructose-specific PTS system IIBC component 41828 43519 1
CDS - ZP_05436015.1 E4_010100002152 hypothetical protein 43942 44883 1
CDS - ZP_05436016.1 E4_010100002157 hypothetical protein 44871 45809 1
CDS - ZP_05436017.1 E4_010100002162 putative nucleoside transporter 45903 47153 1
CDS - ZP_05436018.1 E4_010100002167 DNA-binding transcriptional activator YeiL 47224 47922 -1
CDS rihB ZP_05436019.1 E4_010100002172 ribonucleoside hydrolase 2 48052 48993 1
CDS - ZP_05436020.1 E4_010100002177 putative nucleoside transporter 49093 50343 1
CDS - ZP_05436021.1 E4_010100002182 hypothetical protein 50450 51538 -1
CDS - ZP_05436022.1 E4_010100002187 endonuclease IV 51541 52398 -1
CDS - ZP_05436023.1 E4_010100002192 conserved inner membrane protein 52472 53521 -1
CDS - ZP_05436024.1 E4_010100002197 putative DNA-binding transcriptional regulator 53620 54501 1
CDS - ZP_05436025.1 E4_010100002202 lysine transporter 54706 56175 1
CDS - ZP_05436026.1 E4_010100002207 colicin I receptor 56469 58460 1
CDS - ZP_05436027.1 E4_010100002212 predicted esterase 58492 59328 -1
CDS folE ZP_05436028.1 E4_010100002217 GTP cyclohydrolase I 59586 60254 1
CDS - ZP_05436029.1 E4_010100002222 hypothetical protein 60271 61428 1
CDS - ZP_05436030.1 E4_010100002227 DNA-binding transcriptional regulator GalS 61570 62610 1
CDS - ZP_05436031.1 E4_010100002232 methyl-galactoside transporter subunit 62890 63888 1
CDS - ZP_05436032.1 E4_010100002237 galactose/methyl galaxtoside transporter ATP-binding protein 63949 65469 1
CDS mglC ZP_05436033.1 E4_010100002242 beta-methylgalactoside transporter inner membrane component 65485 66495 1
CDS - ZP_05436034.1 E4_010100002247 dihydropyrimidine dehydrogenase 66738 67973 -1
CDS - ZP_05436035.1 E4_010100002252 putative oxidoreductase 67967 69205 -1
CDS - ZP_05436036.1 E4_010100002257 predicted inner membrane protein 69399 69638 -1
CDS - ZP_05436037.1 E4_010100002262 hypothetical protein 69641 70360 -1
CDS - ZP_05436038.1 E4_010100002267 cytidine deaminase 70510 71394 -1
CDS - ZP_05436039.1 E4_010100002272 hypothetical protein 71524 72219 -1
CDS - ZP_05436040.1 E4_010100002277 hypothetical protein 72216 72614 -1
CDS - ZP_05436041.1 E4_010100002282 tRNA-dihydrouridine synthase C 72787 73800 1
CDS - ZP_05436042.1 E4_010100002287 multidrug resistance outer membrane protein MdtQ 74480 75916 1
CDS - ZP_05436043.1 E4_010100002292 acetoin dehydrogenase 75969 76730 1
CDS - ZP_05436044.1 E4_010100002297 conserved inner membrane protein 76860 77438 -1
CDS - ZP_05436045.1 E4_010100002302 hypothetical protein 77608 78195 1
CDS pbpG ZP_05436046.1 E4_010100002307 D-alanyl-D-alanine endopeptidase 78369 79301 1
CDS - ZP_05436047.1 E4_010100002312 D-lactate dehydrogenase 79339 81054 -1
CDS - ZP_05436048.1 E4_010100002317 periplasmic beta-glucosidase precursor 81250 83547 1
CDS - ZP_05436049.1 E4_010100002322 substrate-binding region of ABC-type glycine betaine transport system 83799 84716 1
CDS - ZP_05436050.1 E4_010100002327 binding-protein-dependent transport systems inner membrane component 84723 85880 1
CDS - ZP_05436051.1 E4_010100002332 ABC transporter related protein 85873 86799 1
CDS - ZP_05436052.1 E4_010100002337 predicted transporter subunit: membrane component of ABC superfamily protein 86804 87535 1
CDS - ZP_05436053.1 E4_010100002342 hypothetical protein 87516 87623 -1
CDS - ZP_05436054.1 E4_010100002347 DNA-binding transcriptional regulator 87683 88414 -1
CDS - ZP_05436055.1 E4_010100002352 predicted sensory kinase in two-component system with YehT 88636 90321 1
CDS - ZP_05436056.1 E4_010100002357 putative two-component response-regulatory protein YehT 90318 91037 1
CDS - ZP_05436057.1 E4_010100002362 hypothetical protein 91084 91554 1
CDS - ZP_05436058.1 E4_010100002367 hypothetical protein 91595 92056 -1
CDS - ZP_05436059.1 E4_010100002372 zinc finger SWIM domain-containing protein 92181 94184 -1
CDS - ZP_05436060.1 E4_010100002377 hypothetical protein 94181 95317 -1
CDS - ZP_05436061.1 E4_010100002382 hypothetical protein 95310 97589 -1
CDS - ZP_05436062.1 E4_010100002387 ATPase 97600 98688 -1
CDS - ZP_05436063.1 E4_010100002392 putative regulator 99373 103005 -1
CDS - ZP_05436064.1 E4_010100002397 WGR domain-containing protein 103015 106809 -1
CDS metG ZP_05436065.1 E4_010100002402 methionyl-tRNA synthetase 106950 108983 -1
CDS - ZP_05436066.1 E4_010100002407 putative ATPase 109115 110224 1
CDS - ZP_05436067.1 E4_010100002412 hypothetical protein 110487 110768 1
CDS - ZP_05436068.1 E4_010100002417 putative fimbrial-like adhesin protein 111061 111603 1
CDS - ZP_05436069.1 E4_010100002422 putative periplasmic pilin chaperone 111638 112357 1
CDS - ZP_05436070.1 E4_010100002427 putative outer membrane protein 112373 114853 1
CDS - ZP_05436071.1 E4_010100002432 putative exported fimbrial-like adhesin protein 114869 115903 1