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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05436190.1 E4_010100003029 putative transposase 171 1154 1
CDS - ZP_05436191.1 E4_010100003034 putative transposase (part) 1233 1394 1
CDS ggt ZP_05436192.1 E4_010100003039 gamma-glutamyltranspeptidase 1495 1662 1
CDS - ZP_05436193.1 E4_010100003044 hypothetical protein 1653 1766 1
CDS - ZP_05436194.1 E4_010100003049 putative phosphotriesterase-related protein 1806 2840 -1
CDS - ZP_05436195.1 E4_010100003054 hypothetical protein 2843 3808 -1
CDS - ZP_05436196.1 E4_010100003059 hypothetical protein 3865 4623 -1
CDS - ZP_05436197.1 E4_010100003064 putative carbohydrate kinase 4735 5847 -1
CDS - ZP_05436198.1 E4_010100003069 hypothetical protein 6043 6159 -1
CDS - ZP_05436199.1 E4_010100003074 hypothetical protein 6266 6403 -1
CDS - ZP_05436200.1 E4_010100003079 hypothetical protein 6465 6608 1
CDS - ZP_05436201.1 E4_010100003084 transposase, IS3 family protein 6962 7078 1
CDS - ZP_05436202.1 E4_010100003089 hypothetical protein 7239 7340 1
CDS - ZP_05436203.1 E4_010100003094 putative thioesterase 7468 7602 1
CDS - ZP_05436204.1 E4_010100003099 putative phosphoadenosine phosphosulfate reductase 7592 8824 1
CDS - ZP_05436205.1 E4_010100003104 putative ParB-like nuclease 8809 9453 1
CDS - ZP_05436206.1 E4_010100003109 hypothetical protein 9708 9824 -1
CDS - ZP_05436207.1 E4_010100003124 hypothetical protein 13013 13177 1
CDS cobU ZP_05436208.1 E4_010100003129 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 13642 14187 1
CDS cobS ZP_05436209.1 E4_010100003134 cobalamin synthase 14184 14927 1
CDS cobT ZP_05436210.1 E4_010100003139 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14939 16018 1
CDS - ZP_05436211.1 E4_010100003144 hypothetical protein 16080 17015 1
tRNA - - E4_010100t04881 tRNA-Asn 17071 17146 -1
CDS - ZP_05436212.1 E4_010100003149 nitrogen assimilation transcriptional regulator 17472 18389 1
CDS cbl ZP_05436213.1 E4_010100003154 transcriptional regulator Cbl 18491 19441 1
tRNA - - E4_010100t04883 tRNA-Asn 19479 19554 -1
CDS - ZP_05436214.1 E4_010100003159 hypothetical protein 19562 21202 1
tRNA - - E4_010100t04885 tRNA-Asn 21303 21378 1
CDS - ZP_05436215.1 E4_010100003164 hypothetical protein 21832 22548 -1
CDS - ZP_05436216.1 E4_010100003169 AMP nucleosidase 22891 24345 -1
CDS - ZP_05436217.1 E4_010100003174 shikimate transporter 24447 25763 -1
CDS - ZP_05436218.1 E4_010100003179 hypothetical protein 26078 27130 1
CDS - ZP_05436219.1 E4_010100003194 hypothetical protein 29252 29392 -1
CDS - ZP_05436220.1 E4_010100003199 hypothetical protein 29349 30098 -1
CDS - ZP_05436221.1 E4_010100003204 Yersiniabactin/pesticin outer membrane receptor (IRPC) 30749 32770 -1
CDS - ZP_05436222.1 E4_010100003209 salicyl-AMP ligase YbtE 32901 34478 -1
CDS - ZP_05436223.1 E4_010100003214 putative thioesterase YbtT 34482 35270 -1
CDS - ZP_05436224.1 E4_010100003219 Thiazolinyl-S-HMWP1 reductase YbtU 35282 36382 -1
CDS - ZP_05436225.1 E4_010100003224 High-molecular-weight nonribosomal peptide/polyketide synthetase 1 (HMWP1) 36379 45858 -1
CDS - ZP_05436226.1 E4_010100003229 High-molecular-weight nonribosomal peptide/polyketide synthetase 2 (HMWP2) 45946 52053 -1
CDS - ZP_05436227.1 E4_010100003234 AraC type regulator of yersiniabactin gene cluster (HPI) 52244 53203 -1
CDS - ZP_05436228.1 E4_010100003239 permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtP 53460 55172 1
CDS - ZP_05436229.1 E4_010100003244 permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ 55159 56961 1
CDS - ZP_05436230.1 E4_010100003249 putative permease of yersiniabactin-iron transporter YbtX 56954 58234 1
CDS - ZP_05436231.1 E4_010100003254 salicylate synthase Irp9 58262 59566 1
CDS - ZP_05436232.1 E4_010100003259 integrase 59760 60803 -1
CDS - ZP_05436233.1 E4_010100003264 hypothetical protein 60822 61049 1
tRNA - - E4_010100t04887 tRNA-Asn 61184 61259 -1
CDS - ZP_05436234.1 E4_010100003269 hypothetical protein 61360 62157 -1
tRNA - - E4_010100t04889 tRNA-Ser 62251 62340 1
CDS - ZP_05436235.1 E4_010100003274 putative cytochrome 62910 63440 -1
CDS - ZP_05436236.1 E4_010100003279 hypothetical protein 63783 64433 -1
CDS - ZP_05436237.1 E4_010100003284 putative sulfite oxidase subunit YedZ 64690 65325 -1
CDS - ZP_05436238.1 E4_010100003289 putative sulfite oxidase subunit YedY 65326 66330 -1
CDS - ZP_05436239.1 E4_010100003294 hydroxyisourate hydrolase 66439 66852 -1
CDS - ZP_05436240.1 E4_010100003299 transcriptional regulatory protein YedW 66874 67656 1
CDS - ZP_05436241.1 E4_010100003304 sensory kinase in two-component regulatory system with YedW 67656 69014 1
CDS - ZP_05436242.1 E4_010100003309 chaperone protein HchA 69112 69963 -1
CDS - ZP_05436243.1 E4_010100003314 hypothetical protein 70171 70380 1
CDS - ZP_05436244.1 E4_010100003319 hypothetical protein 70418 70555 1
CDS - ZP_05436245.1 E4_010100003324 Outer membrane protein N precursor 70556 71671 -1
CDS - ZP_05436246.1 E4_010100003329 hypothetical protein 72238 72603 1
CDS - ZP_05436247.1 E4_010100003334 hypothetical protein 72643 73338 1
CDS - ZP_05436248.1 E4_010100003339 DNA cytosine methylase 73405 74823 1
CDS - ZP_05436249.1 E4_010100003344 DNA mismatch endonuclease of very short patch repair 74804 75274 1
CDS - ZP_05436250.1 E4_010100003349 hypothetical protein 75263 76183 -1
CDS - ZP_05436251.1 E4_010100003354 hypothetical protein 76356 77273 1
CDS - ZP_05436252.1 E4_010100003359 hypothetical protein 77352 77534 1
CDS - ZP_05436253.1 E4_010100003374 mannosyl-3-phosphoglycerate phosphatase 79396 80211 -1
CDS - ZP_05436254.1 E4_010100003379 hypothetical protein 80510 80737 -1
CDS - ZP_05436255.1 E4_010100003384 hypothetical protein 80900 81088 1
CDS - ZP_05436256.1 E4_010100003389 DNA-binding transcriptional activator, co-regulator with RcsB 81132 81755 -1
CDS fliR ZP_05436257.1 E4_010100003394 flagellar biosynthesis protein FliR 82045 82830 -1
CDS fliQ ZP_05436258.1 E4_010100003399 flagellar biosynthesis protein FliQ 82839 83108 -1
CDS fliP ZP_05436259.1 E4_010100003404 flagellar biosynthesis protein FliP 83118 83855 -1
CDS - ZP_05436260.1 E4_010100003409 flagellar biosynthesis protein FliO 83855 84220 -1
CDS fliN ZP_05436261.1 E4_010100003414 flagellar motor switch protein FliN 84223 84636 -1
CDS fliM ZP_05436262.1 E4_010100003419 flagellar motor switch protein FliM 84633 85637 -1
CDS fliL ZP_05436263.1 E4_010100003424 flagellar basal body-associated protein FliL 85642 86106 -1
CDS - ZP_05436264.1 E4_010100003429 flagellar hook-length control protein 86211 87338 -1
CDS fliJ ZP_05436265.1 E4_010100003434 flagellar biosynthesis chaperone 87335 87778 -1
CDS fliI ZP_05436266.1 E4_010100003439 flagellum-specific ATP synthase 87797 89170 -1
CDS fliH ZP_05436267.1 E4_010100003444 flagellar assembly protein H 89170 89856 -1
CDS fliG ZP_05436268.1 E4_010100003449 flagellar motor switch protein G 89849 90844 -1
CDS fliF ZP_05436269.1 E4_010100003454 flagellar MS-ring protein 90837 92495 -1
CDS fliE ZP_05436270.1 E4_010100003459 flagellar hook-basal body protein FliE 92710 93024 1
CDS - ZP_05436271.1 E4_010100003464 hypothetical protein 93112 93291 -1
CDS emrE ZP_05436272.1 E4_010100003469 multidrug efflux protein 93368 93700 1
CDS - ZP_05436273.1 E4_010100003474 putative kinase inhibitor 93869 94420 1
CDS - ZP_05436274.1 E4_010100003479 putative DNA-binding transcriptional regulator; DLP12 prophage 94430 95227 1
CDS - ZP_05436275.1 E4_010100003484 putative transposase ORF A, IS609 family protein 95384 95953 -1
CDS - ZP_05436276.1 E4_010100003489 hypothetical protein 96142 96639 -1
CDS - ZP_05436277.1 E4_010100003494 hypothetical protein 96748 96981 -1
CDS - ZP_05436278.1 E4_010100003499 putative inner membrane protein 96978 98183 -1
CDS - ZP_05436279.1 E4_010100003504 hypothetical protein 98370 98783 1
CDS - ZP_05436280.1 E4_010100003509 cytoplasmic alpha-amylase 98817 100304 -1
CDS - ZP_05436281.1 E4_010100003514 flagellar biosynthesis protein FliT 100382 100747 -1
CDS fliS ZP_05436282.1 E4_010100003519 flagellar protein FliS 100747 101157 -1
CDS fliD ZP_05436283.1 E4_010100003524 flagellar capping protein 101172 102584 -1
CDS - ZP_05436284.1 E4_010100003529 flagellin 102839 104332 1