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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05436973.1 E4_010100007039 2-dehydro-3-deoxyphosphooctonate aldolase 74 928 -1
CDS - ZP_05436974.1 E4_010100007044 putative transcriptional regulator 964 1773 -1
CDS - ZP_05436975.1 E4_010100007049 putative transcriptional regulator 1777 2169 -1
CDS - ZP_05436976.1 E4_010100007054 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2166 2999 -1
CDS prfA ZP_05436977.1 E4_010100007059 peptide chain release factor 1 2999 4081 -1
CDS hemA ZP_05436978.1 E4_010100007064 glutamyl-tRNA reductase 4123 5379 -1
CDS lolB ZP_05436979.1 E4_010100007069 outer membrane lipoprotein LolB 5593 6216 1
CDS ipk ZP_05436980.1 E4_010100007074 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 6216 7067 1
CDS - ZP_05436981.1 E4_010100007079 ribose-phosphate pyrophosphokinase 7152 8165 1
CDS - ZP_05436982.1 E4_010100007084 putative sulfate transporter YchM 8290 9969 1
CDS - ZP_05436983.1 E4_010100007089 hypothetical protein 10024 10302 -1
CDS - ZP_05436984.1 E4_010100007094 peptidyl-tRNA hydrolase 10580 11164 1
CDS - ZP_05436985.1 E4_010100007099 GTP-dependent nucleic acid-binding protein EngD 11281 12372 1
CDS - ZP_05436986.1 E4_010100007104 hypothetical protein 12617 12796 -1
CDS - ZP_05436987.1 E4_010100007109 putative adhesin 13141 16008 1
CDS - ZP_05436988.1 E4_010100007114 DNA-binding transcriptional regulator DhaR 16108 18027 -1
CDS - ZP_05436989.1 E4_010100007119 dihydroxyacetone kinase subunit DhaK 18255 19325 1
CDS - ZP_05436990.1 E4_010100007124 dihydroxyacetone kinase ADP-binding subunit 19336 19968 1
CDS - ZP_05436991.1 E4_010100007129 dihydroxyacetone kinase subunit M 19979 21397 1
CDS treA ZP_05436992.1 E4_010100007134 trehalase 21717 23414 1
CDS - ZP_05436993.1 E4_010100007139 hypothetical protein 23493 23933 -1
CDS - ZP_05436994.1 E4_010100007144 putative inner membrane protein 24111 24365 -1
CDS - ZP_05436995.1 E4_010100007149 YcgR 24566 25300 1
CDS - ZP_05436996.1 E4_010100007154 murein transglycosylase E 25302 25913 -1
CDS ldcA ZP_05436997.1 E4_010100007159 L,D-carboxypeptidase A 26013 26927 1
CDS - ZP_05436998.1 E4_010100007164 potassium/proton antiporter 27022 28758 1
CDS dadX ZP_05436999.1 E4_010100007169 alanine racemase 29144 30214 -1
CDS - ZP_05437000.1 E4_010100007174 D-amino acid dehydrogenase small subunit 30224 31522 -1
CDS - ZP_05437001.1 E4_010100007179 SpoVR family protein 31852 33384 1
CDS - ZP_05437002.1 E4_010100007184 fatty acid metabolism regulator 33436 34155 -1
CDS nhaB ZP_05437003.1 E4_010100007189 sodium/proton antiporter 34376 35917 1
CDS - ZP_05437004.1 E4_010100007194 disulfide bond formation protein B 36063 36593 1
CDS umuC ZP_05437005.1 E4_010100007199 DNA polymerase V subunit UmuC 36639 37907 -1
CDS - ZP_05437006.1 E4_010100007204 DNA polymerase V subunit UmuD 37907 38326 -1
CDS hlyE ZP_05437007.1 E4_010100007209 hemolysin E 38699 39610 1
CDS - ZP_05437008.1 E4_010100007214 hypothetical protein 39817 40278 -1
CDS - ZP_05437009.1 E4_010100007219 hypothetical protein 40355 41014 -1
CDS - ZP_05437010.1 E4_010100007224 hypothetical protein 41086 41379 -1
CDS - ZP_05437011.1 E4_010100007229 hypothetical protein 41621 42022 1
CDS - ZP_05437012.1 E4_010100007234 hypothetical protein 42125 42493 -1
CDS minC ZP_05437013.1 E4_010100007239 septum formation inhibitor 43013 43708 1
CDS - ZP_05437014.1 E4_010100007244 cell division inhibitor MinD 43732 44544 1
CDS minE ZP_05437015.1 E4_010100007249 cell division topological specificity factor MinE 44548 44814 1
CDS - ZP_05437016.1 E4_010100007254 adhesin-like autotransporter 45186 45398 -1
CDS - ZP_05437017.1 E4_010100007259 hypothetical protein 46165 46449 1
CDS - ZP_05437018.1 E4_010100007264 hypothetical protein 46453 46788 1
CDS - ZP_05437019.1 E4_010100007269 hypothetical protein 46871 47764 -1
CDS - ZP_05437020.1 E4_010100007274 hypothetical protein 47972 49492 -1
CDS - ZP_05437021.1 E4_010100007279 hypothetical protein 49892 50110 -1
CDS - ZP_05437022.1 E4_010100007284 hypothetical protein 50242 51765 -1
CDS - ZP_05437023.1 E4_010100007289 hypothetical protein 52097 52345 -1
CDS - ZP_05437024.1 E4_010100007294 hypothetical protein 52458 52724 -1
CDS - ZP_05437025.1 E4_010100007299 hypothetical protein 52753 53025 -1
CDS - ZP_05437026.1 E4_010100007304 hypothetical protein 53068 53304 -1
CDS - ZP_05437027.1 E4_010100007309 putative FAD-binding phosphodiesterase 53618 54829 1
CDS - ZP_05437028.1 E4_010100007314 putative DNA-binding transcriptional regulator 55034 55765 1
CDS - ZP_05437029.1 E4_010100007319 hypothetical protein 55986 56390 1
CDS - ZP_05437030.1 E4_010100007324 hypothetical protein 57092 57415 1
CDS - ZP_05437031.1 E4_010100007329 isocitrate dehydrogenase 57518 58768 -1
CDS - ZP_05437032.1 E4_010100007334 23S rRNA pseudouridine synthase E 58970 59593 1
CDS - ZP_05437033.1 E4_010100007339 thiamin pyrophosphate (TPP) hydrolase 59603 60064 1
CDS mnmA ZP_05437034.1 E4_010100007344 tRNA-specific 2-thiouridylase MnmA 60118 61224 1
CDS - ZP_05437035.1 E4_010100007349 hypothetical protein 61254 61901 1
CDS - ZP_05437036.1 E4_010100007354 adenylosuccinate lyase 61905 63275 1
CDS - ZP_05437037.1 E4_010100007359 DNA-binding transcriptional regulator PhoP 63444 64115 1
CDS - ZP_05437038.1 E4_010100007364 sensor protein PhoQ 64115 65575 1
CDS - ZP_05437039.1 E4_010100007369 hypothetical protein 65651 66772 1
CDS - ZP_05437040.1 E4_010100007374 peptidase T 66821 68047 -1
CDS potA ZP_05437041.1 E4_010100007379 putrescine/spermidine ABC transporter ATPase protein 68297 69433 1
CDS potB ZP_05437042.1 E4_010100007384 spermidine/putrescine ABC transporter membrane protein 69417 70274 1
CDS potC ZP_05437043.1 E4_010100007389 spermidine/putrescine ABC transporter membrane protein 70271 71065 1
CDS potD ZP_05437044.1 E4_010100007394 spermidine/putrescine ABC transporter periplasmic substrate-binding protein 71062 72108 1
CDS - ZP_05437045.1 E4_010100007399 putative inner membrane protein 72166 72627 1
CDS - ZP_05437046.1 E4_010100007404 putative inner membrane protein 72624 73412 1
CDS - ZP_05437047.1 E4_010100007409 NAD-dependent deacetylase 73532 74371 -1
CDS - ZP_05437048.1 E4_010100007414 N-acetyl-D-glucosamine kinase 74387 75298 -1
CDS - ZP_05437049.1 E4_010100007419 outer membrane-specific lipoprotein transporter subunit LolE 75327 76571 -1
CDS lolD ZP_05437050.1 E4_010100007424 lipoprotein transporter ATP-binding subunit 76571 77272 -1
CDS - ZP_05437051.1 E4_010100007429 outer membrane-specific lipoprotein transporter subunit LolC 77265 78464 -1
CDS - ZP_05437052.1 E4_010100007434 putative inner membrane protein 78726 79799 1
CDS - ZP_05437053.1 E4_010100007439 transcription-repair coupling factor 79927 83373 1
CDS - ZP_05437054.1 E4_010100007444 hypothetical protein 83520 84479 1
CDS - ZP_05437055.1 E4_010100007449 hypothetical protein 84561 84818 -1
CDS - ZP_05437056.1 E4_010100007454 putative DNA-binding transcriptional regulator 85059 85691 1
CDS - ZP_05437057.1 E4_010100007459 hypothetical protein 85753 86280 -1
CDS - ZP_05437058.1 E4_010100007464 respiratory NADH dehydrogenase 2/cupric reductase 86502 87806 -1
CDS - ZP_05437059.1 E4_010100007469 hypothetical protein 88206 88748 -1
CDS - ZP_05437060.1 E4_010100007474 beta-hexosaminidase 88771 89784 -1
CDS thiK ZP_05437061.1 E4_010100007479 thiamine kinase 89807 90631 -1
CDS - ZP_05437062.1 E4_010100007484 predicted outer membrane lipoprotein 90612 91253 -1
CDS - ZP_05437063.1 E4_010100007489 hypothetical protein 91267 91644 -1
CDS - ZP_05437064.1 E4_010100007494 purine nucleoside phosphoramidase 91647 92006 -1
CDS - ZP_05437065.1 E4_010100007499 ferric-rhodotorulic acid outer membrane transporter 92340 93099 1