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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05437137.1 E4_010100007859 putative diguanylate cyclase 8 1366 -1
CDS pgaA ZP_05437138.1 E4_010100007864 outer membrane protein PgaA 1953 4376 1
CDS - ZP_05437139.1 E4_010100007869 predicted enzyme associated with biofilm formation 4385 6403 1
CDS - ZP_05437140.1 E4_010100007874 N-glycosyltransferase PgaC 6396 7721 1
CDS - ZP_05437141.1 E4_010100007879 predicted inner membrane protein 7723 8136 1
CDS - ZP_05437142.1 E4_010100007884 hypothetical protein 8186 9250 -1
CDS - ZP_05437143.1 E4_010100007889 hypothetical protein 9595 10866 -1
CDS - ZP_05437144.1 E4_010100007894 hypothetical protein 10872 11999 -1
CDS - ZP_05437145.1 E4_010100007899 ferrous iron permease 12057 12887 -1
CDS - ZP_05437146.1 E4_010100007904 proline:sodium symporter 13430 14938 -1
CDS - ZP_05437147.1 E4_010100007909 hypothetical protein 15097 15306 -1
CDS putA ZP_05437148.1 E4_010100007914 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 15361 19323 1
CDS - ZP_05437149.1 E4_010100007919 putative DNA-binding transcriptional regulator 19363 20001 -1
CDS - ZP_05437150.1 E4_010100007924 putative monooxygenase 20289 21380 1
CDS - ZP_05437151.1 E4_010100007929 putative enzyme 21380 22072 1
CDS - ZP_05437152.1 E4_010100007934 hypothetical protein 22084 22470 1
CDS - ZP_05437153.1 E4_010100007939 predicted hydrolase 22478 23278 1
CDS - ZP_05437154.1 E4_010100007944 hypothetical protein 23288 23878 1
CDS - ZP_05437155.1 E4_010100007949 putative oxidoreductase, flavin:NADH component 23889 24383 1
CDS - ZP_05437156.1 E4_010100007954 putative transporter 24404 25732 1
CDS - ZP_05437157.1 E4_010100007959 hypothetical protein 25989 26162 -1
CDS - ZP_05437158.1 E4_010100007964 TrpR binding protein WrbA 26535 27131 1
CDS - ZP_05437159.1 E4_010100007969 hypothetical protein 27152 27379 1
CDS - ZP_05437160.1 E4_010100007974 glucose-1-phosphatase/inositol phosphatase 27417 28658 -1
CDS - ZP_05437161.1 E4_010100007979 hypothetical protein 28951 30207 -1
CDS - ZP_05437162.1 E4_010100007984 curved DNA-binding protein CbpA 30468 31388 1
CDS - ZP_05437163.1 E4_010100007989 chaperone-modulator protein CbpM 31388 31693 1
CDS torD ZP_05437164.1 E4_010100007994 chaperone protein TorD 31845 32444 -1
CDS - ZP_05437165.1 E4_010100007999 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 32441 34987 -1
CDS - ZP_05437166.1 E4_010100008004 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 34987 36159 -1
CDS - ZP_05437167.1 E4_010100008009 DNA-binding transcriptional regulator TorR 36289 36981 1
CDS - ZP_05437168.1 E4_010100008014 TMAO reductase system periplasmic protein TorT 36954 37982 -1
CDS - ZP_05437169.1 E4_010100008019 hybrid sensory histidine kinase TorS 38095 40809 1
CDS - ZP_05437170.1 E4_010100008024 putative 4Fe-4S membrane protein 40881 41954 1
CDS - ZP_05437171.1 E4_010100008029 predicted regulator of phosphatidylethanolamine synthesis 42003 42176 -1
CDS - ZP_05437172.1 E4_010100008034 cold shock gene 42166 42429 -1
CDS - ZP_05437173.1 E4_010100008039 Putative cold-shock protein (fragment) 42371 42631 -1
CDS - ZP_05437174.1 E4_010100008044 cold shock protein CspG 42570 42782 -1
CDS - ZP_05437175.1 E4_010100008049 stress protein, member of the CspA-family 43068 43280 1
CDS - ZP_05437176.1 E4_010100008054 hypothetical protein 43723 44028 1
CDS - ZP_05437177.1 E4_010100008059 putative outer membrane lipoprotein 44135 44779 1
CDS - ZP_05437178.1 E4_010100008064 hypothetical protein 44776 45522 1
CDS - ZP_05437179.1 E4_010100008069 hypothetical protein 45522 47618 1
CDS - ZP_05437180.1 E4_010100008074 predicted exopolysaccharide export protein 47664 48803 1
CDS etp ZP_05437181.1 E4_010100008079 phosphotyrosine-protein phosphatase 48791 49237 1
CDS - ZP_05437182.1 E4_010100008084 cryptic autophosphorylating protein tyrosine kinase Etk 49257 51437 1
CDS - ZP_05437183.1 E4_010100008089 phosphoanhydride phosphorylase 51552 52880 -1
CDS - ZP_05437184.1 E4_010100008094 hypothetical protein 52930 53022 -1
CDS - ZP_05437185.1 E4_010100008099 cytochrome bd-II oxidase, subunit II 53035 54171 -1
CDS - ZP_05437186.1 E4_010100008104 cytochrome bd-II oxidase, subunit I 54183 55727 -1
CDS - ZP_05437187.1 E4_010100008109 HyaF 55861 56718 -1
CDS - ZP_05437188.1 E4_010100008114 hydrogenase-1 operon protein HyaE 56715 57113 -1
CDS - ZP_05437189.1 E4_010100008119 hydrogenase 1 maturation protease 57110 57697 -1
CDS - ZP_05437190.1 E4_010100008124 hydrogenase 1 b-type cytochrome subunit 57694 58401 -1
CDS - ZP_05437191.1 E4_010100008129 hydrogenase 1 large subunit 58420 60213 -1
CDS - ZP_05437192.1 E4_010100008134 hydrogenase-1 small subunit 60210 61328 -1
tRNA - - E4_010100t08651 tRNA-Ser 61755 61842 1
CDS - ZP_05437193.1 E4_010100008139 hypothetical protein 62049 62708 1
CDS - ZP_05437194.1 E4_010100008144 sulfur transfer protein TusE 62799 63128 1
CDS - ZP_05437195.1 E4_010100008149 acylphosphatase 63125 63403 -1
CDS - ZP_05437196.1 E4_010100008154 putative methyltransferase 63498 64688 1
CDS - ZP_05437197.1 E4_010100008159 heat shock protein HspQ 64746 65063 1
CDS - ZP_05437198.1 E4_010100008164 hypothetical protein 65108 65521 -1
CDS - ZP_05437199.1 E4_010100008169 hypothetical protein 65694 66356 1
CDS mgsA ZP_05437200.1 E4_010100008174 methylglyoxal synthase 66452 66910 1
CDS helD ZP_05437201.1 E4_010100008179 DNA helicase IV 66942 68996 -1
CDS - ZP_05437202.1 E4_010100008184 hypothetical protein 69119 69565 1
CDS - ZP_05437203.1 E4_010100008189 hypothetical protein 69575 71737 1
CDS - ZP_05437204.1 E4_010100008194 hypothetical protein 71700 72329 -1
CDS - ZP_05437205.1 E4_010100008199 SOS cell division inhibitor 72548 73057 1
CDS - ZP_05437206.1 E4_010100008204 outer membrane protein A 73357 74454 1
CDS - ZP_05437207.1 E4_010100008209 hypothetical protein 74530 74982 -1
CDS - ZP_05437208.1 E4_010100008214 putative peptidase 75168 76928 1
CDS - ZP_05437209.1 E4_010100008219 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 76889 77515 1
CDS - ZP_05437210.1 E4_010100008224 ribosome modulation factor 77585 77752 -1
CDS - ZP_05437211.1 E4_010100008229 hypothetical protein 78008 78571 -1
CDS - ZP_05437212.1 E4_010100008234 paraquat-inducible protein B 78568 80208 -1
CDS - ZP_05437213.1 E4_010100008239 paraquat-inducible membrane protein A 80213 81466 -1
CDS - ZP_05437214.1 E4_010100008244 ABC transporter ATPase component 81596 83503 -1
CDS rlmL ZP_05437215.1 E4_010100008249 23S rRNA m(2)G2445 methyltransferase 83515 85623 -1
CDS - ZP_05437216.1 E4_010100008254 predicted 2Fe-2S cluster-containing protein 85867 86976 1
CDS - ZP_05437217.1 E4_010100008259 hypothetical protein 86973 87515 -1
CDS - ZP_05437218.1 E4_010100008264 dihydroorotate dehydrogenase 2 87689 88699 -1
CDS - ZP_05437219.1 E4_010100008269 putativi pili assembly chaperone 88810 89499 -1
CDS - ZP_05437220.1 E4_010100008274 putative fimbrial-like adhesin protein 89513 90028 -1
CDS - ZP_05437221.1 E4_010100008279 predicted fimbrial-like adhesin protein 90036 90578 -1
CDS - ZP_05437222.1 E4_010100008284 predicted fimbrial-like adhesin protein 90590 91660 -1
CDS - ZP_05437223.1 E4_010100008289 putative outer membrane usher protein 91651 94248 -1
CDS - ZP_05437224.1 E4_010100008294 predicted periplasmic pilin chaperone 94273 94974 -1
CDS - ZP_05437225.1 E4_010100008299 predicted fimbrial-like adhesin protein 95057 95596 -1
CDS - ZP_05437226.1 E4_010100008304 NAD(P)H-dependent FMN reductase 95952 96527 1
CDS - ZP_05437227.1 E4_010100008309 alkanesulfonate transporter substrate-binding subunit 96520 97479 1
CDS - ZP_05437228.1 E4_010100008314 alkanesulfonate monooxygenase 97476 98621 1
CDS ssuC ZP_05437229.1 E4_010100008319 alkanesulfonate transporter permease subunit 98632 99423 1
CDS ssuB ZP_05437230.1 E4_010100008324 aliphatic sulfonates transport ATP-binding subunit 99420 100187 1
CDS pepN ZP_05437231.1 E4_010100008329 aminopeptidase N 100230 102842 -1
CDS - ZP_05437232.1 E4_010100008334 nicotinate phosphoribosyltransferase 103108 104310 1
CDS asnC ZP_05437233.1 E4_010100008339 asparaginyl-tRNA synthetase 104479 105879 1
CDS - ZP_05437234.1 E4_010100008344 outer membrane protein F 106481 107569 1
CDS - ZP_05437235.1 E4_010100008349 hypothetical protein 107585 107755 -1