xBASE Logo
About | Contact | Home

Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05437750.1 E4_010100010968 rhsD element protein 1 2612 -1
CDS - ZP_05437751.1 E4_010100010973 putative inner membrane protein 3043 5457 -1
CDS - ZP_05437752.1 E4_010100010978 putative ABC transporter ATP-binding protein YbbA 5454 6140 -1
CDS - ZP_05437753.1 E4_010100010983 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 6108 6734 1
CDS - ZP_05437754.1 E4_010100010988 short chain dehydrogenase 6724 7533 1
CDS - ZP_05437755.1 E4_010100010993 predicted thioredoxin domain-containing protein 7594 8448 1
CDS - ZP_05437756.1 E4_010100010998 predicted inner membrane protein 8511 9290 -1
CDS - ZP_05437757.1 E4_010100011003 putative ABC transporter ATP-binding protein YbbL 9277 9954 -1
CDS - ZP_05437758.1 E4_010100011008 predicted protease, membrane anchored 10100 11017 1
CDS - ZP_05437759.1 E4_010100011013 conserved inner membrane protein 11014 11472 1
CDS - ZP_05437760.1 E4_010100011018 DNA-binding transcriptional regulator CueR 11473 11880 -1
CDS - ZP_05437761.1 E4_010100011023 predicted transporter 12005 13297 -1
CDS - ZP_05437762.1 E4_010100011028 glutaminase 13300 14232 -1
CDS copA ZP_05437763.1 E4_010100011033 copper exporting ATPase 14494 16998 1
CDS - ZP_05437764.1 E4_010100011038 plasmid maintenance system antidote protein, XRE family 17314 17655 -1
CDS - ZP_05437765.1 E4_010100011043 hypothetical protein 17793 18587 1
CDS - ZP_05437766.1 E4_010100011048 hypothetical protein 18791 19270 1
CDS ushA ZP_05437767.1 E4_010100011053 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 19307 20959 -1
CDS - ZP_05437768.1 E4_010100011058 fosmidomycin efflux system, member of the major facilitator superfamily protein 21177 22397 1
CDS - ZP_05437769.1 E4_010100011063 putative cation:proton antiport protein 22635 24311 1
CDS - ZP_05437770.1 E4_010100011068 inosine/guanosine kinase 24444 25748 -1
CDS - ZP_05437771.1 E4_010100011073 acetyl esterase 25900 26859 1
CDS hemH ZP_05437772.1 E4_010100011078 ferrochelatase 26856 27818 -1
CDS adk ZP_05437773.1 E4_010100011083 adenylate kinase 28054 28698 -1
CDS - ZP_05437774.1 E4_010100011088 heat shock protein 90 28879 30753 -1
CDS recR ZP_05437775.1 E4_010100011093 recombination protein RecR 30863 31468 -1
CDS - ZP_05437776.1 E4_010100011098 hypothetical protein 31468 31797 -1
CDS - ZP_05437777.1 E4_010100011103 DNA polymerase III subunits gamma and tau 31850 33781 -1
CDS - ZP_05437778.1 E4_010100011108 adenine phosphoribosyltransferase 33910 34461 -1
CDS - ZP_05437779.1 E4_010100011113 hypothetical protein 34614 34991 -1
CDS - ZP_05437780.1 E4_010100011118 primosomal replication protein N'' 35061 35588 1
CDS - ZP_05437781.1 E4_010100011123 hypothetical protein 35602 35763 1
CDS - ZP_05437782.1 E4_010100011128 potassium efflux protein KefA 35975 39337 -1
CDS - ZP_05437783.1 E4_010100011133 DNA-binding transcriptional repressor AcrR 39465 40112 -1
CDS - ZP_05437784.1 E4_010100011138 acriflavine resistance protein A 40254 41447 1
CDS - ZP_05437785.1 E4_010100011143 multidrug efflux system protein 41470 44619 1
CDS - ZP_05437786.1 E4_010100011148 hypothetical protein 45165 45539 1
CDS - ZP_05437787.1 E4_010100011153 modulator of gene expression, with H-NS 45565 45783 1
CDS - ZP_05437788.1 E4_010100011158 maltose O-acetyltransferase 45955 46506 1
CDS - ZP_05437789.1 E4_010100011163 hypothetical protein 46622 47092 1
CDS - ZP_05437790.1 E4_010100011168 conserved inner membrane protein 47256 48806 1
CDS - ZP_05437791.1 E4_010100011173 hypothetical protein 48848 49201 -1
CDS - ZP_05437792.1 E4_010100011178 predicted methyltransferase 49580 49891 1
CDS - ZP_05437793.1 E4_010100011183 predicted outer membrane lipoprotein 49922 50494 -1
CDS - ZP_05437794.1 E4_010100011188 acyl-CoA thioesterase II 50712 51572 1
CDS - ZP_05437795.1 E4_010100011193 ammonium transporter 51621 52907 -1
CDS - ZP_05437796.1 E4_010100011198 glutamine synthetase activity regulation protein 52937 53275 -1
CDS - ZP_05437797.1 E4_010100011203 putative multidrug transporter membrane\ATP-binding components 53456 55237 -1
CDS - ZP_05437798.1 E4_010100011208 putative multidrug transporter membrane\ATP-binding components 55230 57002 -1
CDS - ZP_05437799.1 E4_010100011213 putative DNA-binding transcriptional regulator (Lrp-like) protein 57032 57490 -1
CDS - ZP_05437800.1 E4_010100011218 thiamin pyrimidine pyrophosphate hydrolase 57643 58461 -1
CDS - ZP_05437801.1 E4_010100011223 putative transporter subunit: periplasmic-binding component of ABC superfamily protein 58561 60261 1
CDS - ZP_05437802.1 E4_010100011228 queuosine biosynthesis protein QueC 60326 61021 1
CDS - ZP_05437803.1 E4_010100011233 hypothetical protein 61073 61471 -1
CDS - ZP_05437804.1 E4_010100011238 hypothetical protein 61565 61936 -1
CDS - ZP_05437805.1 E4_010100011243 peptidyl-prolyl cis-trans isomerase (rotamase D) 62087 63958 -1
CDS - ZP_05437806.1 E4_010100011248 transcriptional regulator HU subunit beta 64150 64422 -1
CDS - ZP_05437807.1 E4_010100011253 DNA-binding ATP-dependent protease La 64631 66985 -1
CDS clpX ZP_05437808.1 E4_010100011258 ATP-dependent protease ATP-binding subunit ClpX 67173 68447 -1
CDS - ZP_05437809.1 E4_010100011263 hypothetical protein 68474 68674 1
CDS clpP ZP_05437810.1 E4_010100011268 ATP-dependent Clp protease proteolytic subunit 68573 69196 -1
CDS tig ZP_05437811.1 E4_010100011273 trigger factor 69442 70740 -1
CDS - ZP_05437812.1 E4_010100011278 hypothetical protein 70887 71075 -1
CDS - ZP_05437813.1 E4_010100011283 transcriptional regulator BolA 71084 71401 -1
CDS - ZP_05437814.1 E4_010100011288 hypothetical protein 71706 72284 1
CDS ampG ZP_05437815.1 E4_010100011293 muropeptide transporter 72328 73803 1
CDS - ZP_05437816.1 E4_010100011298 cytochrome o ubiquinol oxidase subunit II 74263 75210 1
CDS - ZP_05437817.1 E4_010100011303 cytochrome o ubiquinol oxidase subunit I 75232 77223 1
CDS - ZP_05437818.1 E4_010100011308 cytochrome o ubiquinol oxidase subunit III 77213 77827 1
CDS - ZP_05437819.1 E4_010100011313 cytochrome o ubiquinol oxidase subunit IV 77827 78156 1
CDS - ZP_05437820.1 E4_010100011318 protoheme IX farnesyltransferase 78171 79058 1
CDS - ZP_05437821.1 E4_010100011323 putative transporter 79207 80571 1
CDS - ZP_05437822.1 E4_010100011328 putative nucleotide-binding protein 80699 81190 -1
CDS - ZP_05437823.1 E4_010100011333 2-dehydropantoate 2-reductase 81358 82269 1
CDS - ZP_05437824.1 E4_010100011338 hypothetical protein 82232 82822 1
CDS - ZP_05437825.1 E4_010100011343 thiamine biosynthesis protein ThiI 82876 84324 -1
CDS - ZP_05437826.1 E4_010100011348 exodeoxyribonuclease VII small subunit 84530 84772 1
CDS - ZP_05437827.1 E4_010100011353 geranyltranstransferase 84772 85671 1
CDS - ZP_05437828.1 E4_010100011358 1-deoxy-D-xylulose-5-phosphate synthase 85696 87558 1
CDS - ZP_05437829.1 E4_010100011363 2-carboxybenzaldehyde reductase 87738 88712 1
CDS - ZP_05437830.1 E4_010100011368 phosphatidylglycerophosphatase A 88766 89284 -1
CDS - ZP_05437831.1 E4_010100011373 thiamine monophosphate kinase 89262 90239 -1
CDS nusB ZP_05437832.1 E4_010100011378 transcription antitermination protein NusB 90317 90736 -1
CDS ribH ZP_05437833.1 E4_010100011383 6,7-dimethyl-8-ribityllumazine synthase 90756 91226 -1
CDS ribD ZP_05437834.1 E4_010100011388 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 91315 92418 -1
CDS nrdR ZP_05437835.1 E4_010100011393 transcriptional regulator NrdR 92422 92871 -1
CDS - ZP_05437836.1 E4_010100011398 hypothetical protein 93022 93561 1
CDS - ZP_05437837.1 E4_010100011403 nucleoside channel, receptor of phage T6 and colicin K 93860 94744 1
CDS - ZP_05437838.1 E4_010100011408 hypothetical protein 94921 95268 -1
CDS secF ZP_05437839.1 E4_010100011413 preprotein translocase subunit SecF 95397 96368 -1
CDS secD ZP_05437840.1 E4_010100011418 preprotein translocase subunit SecD 96379 98193 -1
CDS yajC ZP_05437841.1 E4_010100011423 preprotein translocase subunit YajC 98254 98586 -1
CDS tgt ZP_05437842.1 E4_010100011428 queuine tRNA-ribosyltransferase 98609 99736 -1
CDS queA ZP_05437843.1 E4_010100011433 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 99792 100862 -1
CDS - ZP_05437844.1 E4_010100011438 acyl carrier protein phosphodiesterase 100955 101536 1
CDS - ZP_05437845.1 E4_010100011443 maltodextrin glucosidase 101541 103355 -1
CDS proY ZP_05437846.1 E4_010100011448 putative proline-specific permease 103514 104887 -1
CDS - ZP_05437847.1 E4_010100011453 branched chain amino acid transporter (LIV-II) 104963 106282 -1
CDS phoR ZP_05437848.1 E4_010100011458 phosphate regulon sensor protein 106689 107984 -1
CDS - ZP_05437849.1 E4_010100011463 transcriptional regulator PhoB 108042 108731 -1