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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS tldD ZP_05438047.1 E4_010100012463 protease TldD 77 1522 1
CDS - ZP_05438048.1 E4_010100012468 putative DNA-binding transcriptional regulator 1656 2567 -1
CDS - ZP_05438049.1 E4_010100012473 hypothetical protein 2768 2971 1
CDS - ZP_05438050.1 E4_010100012478 p-hydroxybenzoic acid efflux subunit AaeA 2979 3911 1
CDS - ZP_05438051.1 E4_010100012483 p-hydroxybenzoic acid efflux subunit AaeB 3917 5884 1
CDS - ZP_05438052.1 E4_010100012488 predicted barnase inhibitor 5976 6248 1
CDS - ZP_05438053.1 E4_010100012493 protein YcfR 6304 6618 -1
CDS - ZP_05438054.1 E4_010100012498 arginine repressor 6932 7402 -1
CDS - ZP_05438055.1 E4_010100012503 malate dehydrogenase 7837 8775 1
CDS - ZP_05438056.1 E4_010100012508 serine endoprotease 8838 9905 -1
CDS - ZP_05438057.1 E4_010100012513 serine endoprotease 9995 11362 -1
CDS - ZP_05438058.1 E4_010100012518 cytochrome d ubiquinol oxidase subunit III 11516 11914 -1
CDS - ZP_05438059.1 E4_010100012523 conserved protein with nucleoside triphosphate hydrolase domain 12108 13235 1
CDS rplM ZP_05438060.1 E4_010100012528 50S ribosomal protein L13 13454 13882 1
CDS rpsI ZP_05438061.1 E4_010100012533 30S ribosomal protein S9 13898 14290 1
CDS sspA ZP_05438062.1 E4_010100012538 stringent starvation protein A 14685 15323 1
CDS - ZP_05438063.1 E4_010100012543 ClpXP protease specificity-enhancing factor 15329 15826 1
CDS - ZP_05438064.1 E4_010100012548 putative cryptic C4-dicarboxylate transporter DcuD 15869 17236 -1
CDS - ZP_05438065.1 E4_010100012553 transcriptional regulator NanR 17625 18407 1
CDS - ZP_05438066.1 E4_010100012558 N-acetylneuraminate lyase 18529 19422 1
CDS - ZP_05438067.1 E4_010100012563 putative sialic acid transporter 19531 21021 1
CDS - ZP_05438068.1 E4_010100012568 N-acetylmannosamine-6-phosphate 2-epimerase 21069 21758 1
CDS - ZP_05438069.1 E4_010100012573 N-acetylmannosamine kinase 21755 22630 1
CDS - ZP_05438070.1 E4_010100012578 hypothetical protein 22627 23091 1
CDS - ZP_05438071.1 E4_010100012583 hypothetical protein 23151 24278 -1
CDS - ZP_05438072.1 E4_010100012588 putative transcriptional regulator 24463 25179 -1
CDS - ZP_05438073.1 E4_010100012593 hypothetical protein 25176 25721 -1
CDS - ZP_05438074.1 E4_010100012598 putative outer membrane protein 25718 28099 -1
CDS - ZP_05438075.1 E4_010100012603 putative periplasmic chaperone protein 28120 28731 -1
CDS - ZP_05438076.1 E4_010100012608 periplasmic protein 28966 29730 -1
CDS gltD ZP_05438077.1 E4_010100012613 glutamate synthase subunit beta 30290 31708 -1
CDS gltB ZP_05438078.1 E4_010100012618 glutamate synthase subunit alpha 31721 36181 -1
CDS - ZP_05438079.1 E4_010100012623 putative radical SAM protein 36856 37785 1
CDS - ZP_05438080.1 E4_010100012628 aerobic respiration control sensor protein ArcB 37881 40217 1
CDS - ZP_05438081.1 E4_010100012633 isoprenoid biosynthesis protein with amidotransferase-like domain 40447 41100 1
CDS mtgA ZP_05438082.1 E4_010100012638 monofunctional biosynthetic peptidoglycan transglycosylase 41097 41825 1
CDS - ZP_05438083.1 E4_010100012643 hypothetical protein 41822 42454 -1
CDS - ZP_05438084.1 E4_010100012648 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 42668 42940 -1
CDS - ZP_05438085.1 E4_010100012653 hypothetical protein 42937 43791 -1
CDS - ZP_05438086.1 E4_010100012658 PTS IIA-like nitrogen-regulatory protein PtsN 43837 44328 -1
CDS - ZP_05438087.1 E4_010100012663 putative sigma(54) modulation protein 44446 44733 -1
CDS - ZP_05438088.1 E4_010100012668 RNA polymerase factor sigma-54 44756 46189 -1
CDS - ZP_05438089.1 E4_010100012673 putative ABC transporter ATP-binding protein YhbG 46237 46962 -1
CDS - ZP_05438090.1 E4_010100012678 lipopolysaccharide transport periplasmic protein LptA 46969 47526 -1
CDS - ZP_05438091.1 E4_010100012683 hypothetical protein 47495 48070 -1
CDS - ZP_05438092.1 E4_010100012688 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 48067 48633 -1
CDS - ZP_05438093.1 E4_010100012693 D-arabinose 5-phosphate isomerase 48654 49640 -1
CDS - ZP_05438094.1 E4_010100012698 putative calcium/sodium:proton antiporter 49654 50631 -1
CDS - ZP_05438095.1 E4_010100012703 putative ABC transporter ATP-binding protein YrbF 50841 51650 1
CDS - ZP_05438096.1 E4_010100012708 predicted toluene transporter subunit: membrane component of ABC superfamily protein 51658 52440 1
CDS - ZP_05438097.1 E4_010100012713 predicted ABC-type organic solvent transporter 52445 52996 1
CDS - ZP_05438098.1 E4_010100012718 predicted ABC-type organic solvent transporter 53015 53650 1
CDS - ZP_05438099.1 E4_010100012723 hypothetical protein 53554 53943 1
CDS - ZP_05438100.1 E4_010100012728 BolA family protein 54088 54357 1
CDS - ZP_05438101.1 E4_010100012733 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 54412 55671 1
CDS - ZP_05438102.1 E4_010100012738 DNA-binding transcriptional regulator Nlp 55719 55997 -1
CDS - ZP_05438103.1 E4_010100012743 octaprenyl diphosphate synthase 56225 57196 -1
CDS rplU ZP_05438104.1 E4_010100012748 50S ribosomal protein L21 57455 57766 1
CDS rpmA ZP_05438105.1 E4_010100012753 50S ribosomal protein L27 57787 58044 1
CDS - ZP_05438106.1 E4_010100012758 conserved inner membrane protein 58171 59136 1
CDS obgE ZP_05438107.1 E4_010100012763 GTPase ObgE 59152 60324 1
CDS - ZP_05438108.1 E4_010100012768 D-alanyl-D-alanine carboxypeptidase/endopeptidase 60510 61943 -1
CDS greA ZP_05438109.1 E4_010100012773 transcription elongation factor GreA 62191 62667 1
CDS - ZP_05438110.1 E4_010100012778 RNA-binding protein YhbY 62823 63116 -1
CDS rrmJ ZP_05438111.1 E4_010100012783 23S rRNA methyltransferase J 63242 63871 1
CDS hflB ZP_05438112.1 E4_010100012788 ATP-dependent metalloprotease 63971 65905 1
CDS folP ZP_05438113.1 E4_010100012793 dihydropteroate synthase 65995 66843 1
CDS glmM ZP_05438114.1 E4_010100012798 phosphoglucosamine mutase 66836 68173 1
CDS - ZP_05438115.1 E4_010100012803 hypothetical protein 68087 68230 -1
CDS secG ZP_05438116.1 E4_010100012808 preprotein translocase subunit SecG 68401 68733 1
tRNA - - E4_010100t13035 tRNA-Leu 68748 68834 1
CDS - ZP_05438117.1 E4_010100012813 putative hydrolase, inner membrane 69293 70918 1
CDS - ZP_05438118.1 E4_010100012818 argininosuccinate synthase 70926 72269 -1
tRNA - - E4_010100t13037 tRNA-Met 72617 72693 1
CDS - ZP_05438119.1 E4_010100012823 hypothetical protein 72900 73352 1
CDS nusA ZP_05438120.1 E4_010100012828 transcription elongation factor NusA 73380 74867 1
CDS infB ZP_05438121.1 E4_010100012833 translation initiation factor IF-2 74892 77564 1
CDS rbfA ZP_05438122.1 E4_010100012838 ribosome-binding factor A 77728 78129 1
CDS truB ZP_05438123.1 E4_010100012843 tRNA pseudouridine synthase B 78129 79073 1
CDS rpsO ZP_05438124.1 E4_010100012848 30S ribosomal protein S15 79222 79491 1
CDS - ZP_05438125.1 E4_010100012853 polynucleotide phosphorylase/polyadenylase 79738 81873 1
CDS - ZP_05438126.1 E4_010100012858 lipoprotein NlpI 81982 82866 1
CDS - ZP_05438127.1 E4_010100012863 ATP-dependent RNA helicase DeaD 83046 84935 1
CDS - ZP_05438128.1 E4_010100012868 tryptophan permease 85089 86333 1
CDS - ZP_05438129.1 E4_010100012873 hypothetical protein 86451 87458 -1
CDS - ZP_05438130.1 E4_010100012878 hypothetical protein 87539 88417 -1
CDS - ZP_05438131.1 E4_010100012883 putative peptidase (collagenase-like) protein 88426 89421 -1
CDS - ZP_05438132.1 E4_010100012888 hypothetical protein 89630 90154 1
CDS - ZP_05438133.1 E4_010100012893 predicted acyltransferase with acyl-CoA N-acyltransferase domain 90148 90651 1
CDS - ZP_05438134.1 E4_010100012898 GIY-YIG nuclease superfamily protein 90638 90940 -1
CDS - ZP_05438135.1 E4_010100012903 hypothetical protein 90991 91434 1
CDS - ZP_05438136.1 E4_010100012908 predicted intracellular protease 91414 91932 -1
CDS - ZP_05438137.1 E4_010100012913 putative nucleoside-diphosphate-sugar epimerase 92060 92695 1
CDS - ZP_05438138.1 E4_010100012918 putative permease 92768 93808 1
CDS - ZP_05438139.1 E4_010100012923 hypothetical protein 93922 94497 -1
CDS - ZP_05438140.1 E4_010100012928 DnaA initiator-associating protein DiaA 94507 95097 -1
CDS - ZP_05438141.1 E4_010100012933 hypothetical protein 95117 95512 -1
CDS - ZP_05438142.1 E4_010100012938 hypothetical protein 95470 97506 -1
CDS - ZP_05438143.1 E4_010100012943 hypothetical protein 97571 98431 1
CDS - ZP_05438144.1 E4_010100012948 predicted fimbrial-like adhesin protein 98474 99565 -1