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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05438167.1 E4_010100013077 hypothetical protein 283 1470 -1
CDS - ZP_05438168.1 E4_010100013082 hypothetical protein 1492 2031 -1
CDS - ZP_05438169.1 E4_010100013087 DNA-binding transcriptional activator TdcR 2287 2643 -1
CDS - ZP_05438170.1 E4_010100013092 DNA-binding transcriptional activator TdcA 2820 3758 1
CDS - ZP_05438171.1 E4_010100013097 threonine dehydratase 3857 4846 1
CDS - ZP_05438172.1 E4_010100013102 threonine/serine transporter TdcC 4868 6199 1
CDS - ZP_05438173.1 E4_010100013107 propionate/acetate kinase 6225 7433 1
CDS - ZP_05438174.1 E4_010100013112 pyruvate formate-lyase 4/2-ketobutyrate formate-lyase 7467 9761 1
CDS - ZP_05438175.1 E4_010100013117 hypothetical protein 9775 10164 1
CDS - ZP_05438176.1 E4_010100013122 L-serine dehydratase 3 10236 11600 1
CDS - ZP_05438177.1 E4_010100013127 serine transporter 11875 13206 1
CDS - ZP_05438178.1 E4_010100013132 hypothetical protein 13234 14544 1
CDS - ZP_05438179.1 E4_010100013137 hypothetical protein 14678 14842 -1
CDS - ZP_05438180.1 E4_010100013142 predicted pirin-related protein 14865 15566 -1
CDS - ZP_05438181.1 E4_010100013147 predicted DNA-binding transcriptional regulator 15671 16567 1
CDS - ZP_05438182.1 E4_010100013152 predicted inner membrane protein 16618 16974 -1
CDS - ZP_05438183.1 E4_010100013157 predicted inner membrane protein 17216 17581 -1
CDS - ZP_05438184.1 E4_010100013162 putative S-transferase 17875 18861 -1
CDS - ZP_05438185.1 E4_010100013167 hypothetical protein 18931 19323 -1
CDS - ZP_05438186.1 E4_010100013172 hypothetical protein 19509 19808 -1
CDS - ZP_05438187.1 E4_010100013177 conserved inner membrane protein 19798 20202 -1
CDS - ZP_05438188.1 E4_010100013182 hypothetical protein 20205 20510 -1
CDS - ZP_05438189.1 E4_010100013187 hypothetical protein 20548 20916 -1
CDS - ZP_05438190.1 E4_010100013192 hypothetical protein 21063 21431 -1
CDS - ZP_05438191.1 E4_010100013197 conserved inner membrane protein 21450 22112 -1
CDS - ZP_05438192.1 E4_010100013202 DNA-binding transcriptional repressor ExuR 22457 23233 -1
CDS - ZP_05438193.1 E4_010100013207 d-galactonate transporter 23363 24661 -1
CDS - ZP_05438194.1 E4_010100013212 glucuronate isomerase 25144 26556 1
CDS - ZP_05438195.1 E4_010100013217 altronate hydrolase 26571 28058 1
CDS - ZP_05438196.1 E4_010100013222 hypothetical protein 28141 28692 1
CDS - ZP_05438197.1 E4_010100013227 serine/threonine transporter SstT 28697 29941 -1
CDS - ZP_05438198.1 E4_010100013232 putative inner membrane protein, part of terminus 30340 31305 -1
CDS - ZP_05438199.1 E4_010100013237 NAD(P)-binding dehydrogenase 31588 32592 -1
CDS - ZP_05438200.1 E4_010100013242 predicted thioredoxin-like protein 32653 33345 -1
CDS - ZP_05438201.1 E4_010100013247 putative metal dependent hydrolase 33422 33925 -1
CDS - ZP_05438202.1 E4_010100013252 predicted methyltransferase small domain protein 34010 35146 1
CDS - ZP_05438203.1 E4_010100013257 hypothetical protein 35430 35744 1
CDS - ZP_05438204.1 E4_010100013262 predicted DNA-binding transcriptional regulator 35741 36157 1
CDS - ZP_05438205.1 E4_010100013267 2,4-dienoyl-CoA reductase, NADH and FMN-linked 36202 38220 -1
CDS - ZP_05438206.1 E4_010100013272 putative glycosyl hydrolase 38646 40997 -1
CDS - ZP_05438207.1 E4_010100013277 hypothetical protein 41014 42084 -1
CDS - ZP_05438208.1 E4_010100013282 predicted transporter 42218 43651 -1
CDS ebgC ZP_05438209.1 E4_010100013287 cryptic beta-D-galactosidase subunit beta 43714 44163 -1
CDS ebgA ZP_05438210.1 E4_010100013292 cryptic beta-D-galactosidase subunit alpha 44160 47252 -1
CDS - ZP_05438211.1 E4_010100013297 DNA-binding transcriptional repressor EbgR 47436 48419 -1
CDS - ZP_05438212.1 E4_010100013302 hypothetical protein 48638 48970 1
CDS - ZP_05438213.1 E4_010100013307 putrescine--2-oxoglutarate aminotransferase 49012 50301 -1
CDS - ZP_05438214.1 E4_010100013312 fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component 50809 52329 1
CDS - ZP_05438215.1 E4_010100013317 predicted transcriptional regulator 52482 53105 -1
CDS - ZP_05438216.1 E4_010100013322 putative siderophore interacting protein 53393 54157 1
tRNA - - E4_010100t13449 tRNA-Met 54211 54286 -1
CDS - ZP_05438217.1 E4_010100013327 G/U mismatch-specific DNA glycosylase 54411 54917 1
CDS - ZP_05438218.1 E4_010100013332 RNA polymerase sigma factor RpoD 54996 56837 -1
CDS dnaG ZP_05438219.1 E4_010100013337 DNA primase 57032 58777 -1
CDS rpsU ZP_05438220.1 E4_010100013342 30S ribosomal protein S21 58888 59103 -1
CDS - ZP_05438221.1 E4_010100013347 putative DNA-binding/iron metalloprotein/AP endonuclease 59341 60354 1
CDS - ZP_05438222.1 E4_010100013352 predicted tartrate:succinate antiporter 60397 61860 -1
CDS - ZP_05438223.1 E4_010100013357 L(+)-tartrate dehydratase subunit beta 61908 62513 -1
CDS - ZP_05438224.1 E4_010100013362 tartrate dehydratase subunit alpha 62510 63421 -1
CDS - ZP_05438225.1 E4_010100013367 transcriptional activator TtdR 63628 64560 1
CDS - ZP_05438226.1 E4_010100013372 putative glycerol-3-phosphate acyltransferase PlsY 64573 65190 -1
CDS folB ZP_05438227.1 E4_010100013377 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 65295 65663 1
CDS - ZP_05438228.1 E4_010100013382 undecaprenyl pyrophosphate phosphatase 65753 66574 1
CDS - ZP_05438229.1 E4_010100013397 putative signal transduction protein 68057 68677 -1
CDS - ZP_05438230.1 E4_010100013402 predicted adenylate cyclase 68919 70220 1
CDS - ZP_05438231.1 E4_010100013407 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 70243 73083 1
CDS - ZP_05438232.1 E4_010100013412 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 73131 74564 1
CDS - ZP_05438233.1 E4_010100013417 hypothetical protein 75358 77019 -1
CDS - ZP_05438234.1 E4_010100013422 predicted inner membrane protein 77061 77675 -1
CDS - ZP_05438235.1 E4_010100013427 glycogen synthesis protein GlgS 77944 78144 1
CDS - ZP_05438236.1 E4_010100013432 hypothetical protein 78187 79251 -1
CDS - ZP_05438237.1 E4_010100013437 predicted periplasmic pilin chaperone 79253 80002 -1
CDS - ZP_05438238.1 E4_010100013442 outer membrane usher protein 80018 81669 -1