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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05438239.1 E4_010100013449 fimbrial biogenesis outer membrane usher protein 1 864 -1
CDS - ZP_05438240.1 E4_010100013454 putative fimbrial protein 915 1466 -1
CDS - ZP_05438241.1 E4_010100013459 hypothetical protein 1750 2100 -1
CDS ribB ZP_05438242.1 E4_010100013464 3,4-dihydroxy-2-butanone 4-phosphate synthase 2414 3067 1
CDS - ZP_05438243.1 E4_010100013469 hypothetical protein 3329 3499 1
CDS - ZP_05438244.1 E4_010100013474 zinc transporter ZupT 3557 4330 -1
CDS - ZP_05438245.1 E4_010100013479 hypothetical protein 4473 5261 1
CDS - ZP_05438246.1 E4_010100013484 predicted enzyme 5299 6459 -1
CDS - ZP_05438247.1 E4_010100013489 hypothetical protein 6465 7136 -1
CDS tolC ZP_05438248.1 E4_010100013494 outer membrane channel protein 7284 8765 -1
CDS nudF ZP_05438249.1 E4_010100013499 ADP-ribose pyrophosphatase NudF 8970 9599 1
CDS - ZP_05438250.1 E4_010100013504 hypothetical protein 9600 10022 1
CDS - ZP_05438251.1 E4_010100013509 cyclic 3',5'-adenosine monophosphate phosphodiesterase 10047 10874 1
CDS - ZP_05438252.1 E4_010100013514 esterase YqiA 10874 11455 1
CDS - ZP_05438253.1 E4_010100013519 DNA topoisomerase IV subunit B 11484 13376 1
CDS - ZP_05438254.1 E4_010100013524 quinol monooxygenase 13424 13738 -1
CDS - ZP_05438255.1 E4_010100013529 NADPH quinone reductase 13769 14350 -1
CDS - ZP_05438256.1 E4_010100013534 conserved inner membrane protein 14669 15001 1
CDS - ZP_05438257.1 E4_010100013539 sensor protein QseC 15047 16396 -1
CDS - ZP_05438258.1 E4_010100013544 DNA-binding transcriptional regulator QseB 16393 17052 -1
CDS - ZP_05438259.1 E4_010100013549 hypothetical protein 17204 17596 1
CDS - ZP_05438260.1 E4_010100013554 predicted transcriptional regulator 17649 18131 1
CDS - ZP_05438261.1 E4_010100013559 predicted cyanide hydratase 18336 18632 1
CDS - ZP_05438262.1 E4_010100013564 predicted DNA-binding transcriptional regulator 18634 19029 1
CDS - ZP_05438263.1 E4_010100013569 putative binding protein 19162 20769 1
CDS - ZP_05438264.1 E4_010100013574 DNA topoisomerase IV subunit A 20907 23165 1
CDS - ZP_05438265.1 E4_010100013579 1-acyl-sn-glycerol-3-phosphate acyltransferase 23399 24136 1
CDS - ZP_05438266.1 E4_010100013584 repressor protein for FtsI 24211 25623 1
CDS - ZP_05438267.1 E4_010100013589 hypothetical protein 25734 27953 1
CDS - ZP_05438268.1 E4_010100013594 putative outer membrane lipoprotein 27996 28253 -1
CDS - ZP_05438269.1 E4_010100013599 hypothetical protein 28304 29230 -1
CDS dkgA ZP_05438270.1 E4_010100013604 2,5-diketo-D-gluconate reductase A 29430 30257 -1
CDS - ZP_05438271.1 E4_010100013609 alcohol dehydrogenase, NAD(P)-dependent 30362 31525 -1
CDS - ZP_05438272.1 E4_010100013614 predicted DNA-binding transcriptional regulator 31719 32618 1
CDS - ZP_05438273.1 E4_010100013619 hypothetical protein 32658 33317 -1
CDS - ZP_05438274.1 E4_010100013624 cystathionine beta-lyase 33457 34644 -1
CDS - ZP_05438275.1 E4_010100013629 biopolymer transport protein ExbB 34896 35630 1
CDS - ZP_05438276.1 E4_010100013634 biopolymer transport protein ExbD 35637 36062 1
CDS - ZP_05438277.1 E4_010100013639 oxidoreductase 36101 36985 -1
CDS - ZP_05438278.1 E4_010100013644 hypothetical protein 37176 37670 1
CDS - ZP_05438279.1 E4_010100013649 aldo-keto reductase 37710 38750 -1
CDS - ZP_05438280.1 E4_010100013654 putative enzyme 38906 39793 1
CDS - ZP_05438281.1 E4_010100013659 hypothetical protein 39912 40199 1
CDS - ZP_05438282.1 E4_010100013664 hydrogenase 2 small subunit 40388 41506 1
CDS - ZP_05438283.1 E4_010100013669 hydrogenase 2 protein HybA 41509 42495 1
CDS - ZP_05438284.1 E4_010100013674 putative hydrogenase 2 b cytochrome subunit 42485 43663 1
CDS - ZP_05438285.1 E4_010100013679 hydrogenase 2 large subunit 43660 45363 1
CDS hybD ZP_05438286.1 E4_010100013684 hydrogenase 2 maturation endopeptidase 45363 45857 1
CDS - ZP_05438287.1 E4_010100013689 hydrogenase 2-specific chaperone 45850 46338 1
CDS - ZP_05438288.1 E4_010100013694 hydrogenase nickel incorporation protein HybF 46331 46672 1
CDS - ZP_05438289.1 E4_010100013699 hydrogenase 2 accessory protein HypG 46685 46933 1
CDS - ZP_05438290.1 E4_010100013704 putative glutathione S-transferase YghU 47003 47869 -1
CDS - ZP_05438291.1 E4_010100013709 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 48074 49933 1
CDS - ZP_05438292.1 E4_010100013714 phosphate transporter 50221 51720 1
CDS - ZP_05438293.1 E4_010100013719 predicted protein with nucleoside triphosphate hydrolase domain 51769 52461 -1
CDS - ZP_05438294.1 E4_010100013724 hypothetical protein 52650 53348 1
CDS - ZP_05438295.1 E4_010100013729 hypothetical protein 53380 54138 1
CDS - ZP_05438296.1 E4_010100013734 putative membrane protein, conserved protein 54184 55533 1
CDS - ZP_05438297.1 E4_010100013739 hypothetical protein 55533 56357 1
CDS - ZP_05438298.1 E4_010100013744 Putative transcriptional regulator 56369 56929 1
CDS - ZP_05438299.1 E4_010100013749 hypothetical protein 56960 58030 1
CDS - ZP_05438300.1 E4_010100013754 hypothetical protein 58027 59106 1
CDS - ZP_05438301.1 E4_010100013759 aminotransferase 59141 60313 -1
CDS - ZP_05438302.1 E4_010100013764 hypothetical protein 60313 60561 -1
CDS - ZP_05438303.1 E4_010100013769 putative epimerase 60593 61507 -1
CDS - ZP_05438304.1 E4_010100013774 acyl-CoA synthetase 61504 63228 -1
CDS - ZP_05438305.1 E4_010100013779 predicted DNA-binding transcriptional regulator 63599 64741 1
CDS - ZP_05438306.1 E4_010100013784 DNA-binding transcriptional regulator GlcC 64817 65587 -1
CDS - ZP_05438307.1 E4_010100013789 glycolate oxidase subunit GlcD 65838 67337 1
CDS glcE ZP_05438308.1 E4_010100013794 glycolate oxidase FAD binding subunit 67337 68389 1
CDS glcF ZP_05438309.1 E4_010100013799 glycolate oxidase iron-sulfur subunit 68400 69623 1
CDS - ZP_05438310.1 E4_010100013804 hypothetical protein 69628 70032 1
CDS - ZP_05438311.1 E4_010100013809 malate synthase G 70054 72225 1
CDS - ZP_05438312.1 E4_010100013814 glycolate transporter 72581 74263 1
CDS - ZP_05438313.1 E4_010100013819 inner membrane lipoprotein 74880 79310 1
CDS - ZP_05438314.1 E4_010100013824 putative prepilin peptidase 79440 80249 1
CDS - ZP_05438315.1 E4_010100013829 uncharacterized lipoprotein YghG 80360 80725 1
CDS - ZP_05438316.1 E4_010100013834 putative type II secretion protein GspC 80743 81702 1
CDS - ZP_05438317.1 E4_010100013839 general secretion pathway protein D precursor 81732 83792 1
CDS - ZP_05438318.1 E4_010100013844 general secretion pathway protein E 83792 85285 1
CDS - ZP_05438319.1 E4_010100013849 General secretion pathway protein F 85285 86508 1
CDS - ZP_05438320.1 E4_010100013854 putative general secretion pathway protein G precursor (epsG-like) 86525 86980 1
CDS - ZP_05438321.1 E4_010100013859 hypothetical protein 86984 87547 1
CDS - ZP_05438322.1 E4_010100013864 putative type II secretion protein 87544 87915 1
CDS - ZP_05438323.1 E4_010100013869 type II secretion protein GspJ 87948 88517 1
CDS - ZP_05438324.1 E4_010100013874 putative type II secretion protein (GspK-like) 88517 89494 1
CDS - ZP_05438325.1 E4_010100013879 GspL-like protein 89491 90669 1
CDS - ZP_05438326.1 E4_010100013884 putative general secretion pathway protein YghD 90671 91207 1
CDS - ZP_05438327.1 E4_010100013889 Polysialic acid transport protein 92264 93040 1
CDS - ZP_05438328.1 E4_010100013894 Polysialic acid transport ATP-binding protein kpsT 93037 93714 1
CDS - ZP_05438329.1 E4_010100013899 hypothetical protein 93901 97410 1
CDS - ZP_05438330.1 E4_010100013904 TPR repeat-containing protein 97529 98518 1
CDS - ZP_05438331.1 E4_010100013909 KpsS protein 98596 99804 -1
CDS - ZP_05438332.1 E4_010100013914 Capsule polysaccharide export protein 99839 101866 -1
CDS - ZP_05438333.1 E4_010100013919 3-deoxy-manno-octulosonate cytidylyltransferase 101863 102603 -1
CDS - ZP_05438334.1 E4_010100013924 Polysialic acid transport protein precursor 102613 104289 -1
CDS - ZP_05438335.1 E4_010100013929 Capsule polysaccharide export inner-membrane protein 104313 105461 -1
CDS - ZP_05438336.1 E4_010100013934 polysialic acid capsule expression protein KpsF 105533 106516 -1
CDS - ZP_05438337.1 E4_010100013939 hypothetical protein 107315 107470 -1