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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05438603.1 E4_010100015285 hypothetical protein 185 436 -1
CDS - ZP_05438604.1 E4_010100015290 alkaline phosphatase isozyme conversion aminopeptidase 436 1473 -1
CDS - ZP_05438605.1 E4_010100015295 sulfate adenylyltransferase subunit 2 1725 2633 1
CDS cysN ZP_05438606.1 E4_010100015300 sulfate adenylyltransferase subunit 1 2635 4062 1
CDS - ZP_05438607.1 E4_010100015305 adenylylsulfate kinase 4062 4667 1
CDS - ZP_05438608.1 E4_010100015310 hypothetical protein 4717 5040 1
CDS ftsB ZP_05438609.1 E4_010100015315 cell division protein FtsB 5234 5545 1
CDS ispD ZP_05438610.1 E4_010100015320 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5564 6274 1
CDS ispF ZP_05438611.1 E4_010100015325 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6274 6753 1
CDS truD ZP_05438612.1 E4_010100015330 tRNA pseudouridine synthase D 6750 7799 1
CDS surE ZP_05438613.1 E4_010100015335 stationary phase survival protein SurE 7780 8541 1
CDS pcm ZP_05438614.1 E4_010100015340 protein-L-isoaspartate O-methyltransferase 8535 9161 1
CDS nlpD ZP_05438615.1 E4_010100015345 lipoprotein NlpD 9301 10440 1
CDS - ZP_05438616.1 E4_010100015350 RNA polymerase sigma factor RpoS 10503 11495 1
CDS - ZP_05438617.1 E4_010100015355 inner membrane permease YgbN 11589 12953 -1
CDS - ZP_05438618.1 E4_010100015360 hypothetical protein 13042 13818 -1
CDS - ZP_05438619.1 E4_010100015365 putative aldolase 13823 14461 -1
CDS - ZP_05438620.1 E4_010100015370 type III effector Hrp-dependent outers 14458 15720 -1
CDS - ZP_05438621.1 E4_010100015375 putative dehydrogenase, with NAD(P)-binding Rossmann-fold domain 15717 16625 -1
CDS - ZP_05438622.1 E4_010100015380 putative DNA-binding transcriptional regulator 16821 17588 1
CDS - ZP_05438623.1 E4_010100015385 serine/threonine-specific protein phosphatase 2 17639 18295 -1
CDS - ZP_05438624.1 E4_010100015390 DNA mismatch repair protein MutS 18401 20962 -1
CDS - ZP_05438625.1 E4_010100015395 hypothetical protein 21038 21172 1
CDS - ZP_05438626.1 E4_010100015400 hypothetical protein 21249 21602 1
CDS - ZP_05438627.1 E4_010100015405 DNA-binding transcriptional activator 21639 23717 -1
CDS - ZP_05438628.1 E4_010100015410 hydrogenase expression/formation protein HypE 23791 24801 -1
CDS - ZP_05438629.1 E4_010100015415 HypD 24798 25919 -1
CDS - ZP_05438630.1 E4_010100015420 hydrogenase assembly chaperone 25919 26191 -1
CDS - ZP_05438631.1 E4_010100015425 hydrogenase nickel incorporation protein HypB 26182 27054 -1
CDS hypA ZP_05438632.1 E4_010100015430 hydrogenase nickel incorporation protein 27058 27420 -1
CDS - ZP_05438633.1 E4_010100015435 formate hydrogenlyase regulatory protein HycA 27620 28081 1
CDS - ZP_05438634.1 E4_010100015440 hydrogenase 3, Fe-S subunit 28206 28817 1
CDS - ZP_05438635.1 E4_010100015445 formate hydrogenlyase subunit 3 28814 30640 1
CDS - ZP_05438636.1 E4_010100015450 hydrogenase 3, membrane subunit 30643 31566 1
CDS - ZP_05438637.1 E4_010100015455 formate hydrogenlyase, subunit E 31584 33293 1
CDS - ZP_05438638.1 E4_010100015460 formate hydrogenlyase complex iron-sulfur subunit 33303 33845 1
CDS - ZP_05438639.1 E4_010100015465 hydrogenase 3 and formate hydrogenase complex, HycG subunit 33845 34612 1
CDS - ZP_05438640.1 E4_010100015470 protein required for maturation of hydrogenase 3 34609 35019 1
CDS hycI ZP_05438641.1 E4_010100015475 hydrogenase 3 maturation protease 35012 35482 1
CDS - ZP_05438642.1 E4_010100015480 cryptic 6-phospho-beta-glucosidase 35641 37065 -1
CDS - ZP_05438643.1 E4_010100015485 cellobiose/arbutin/salicin-specific PTS system components IIBC 37074 38531 -1
CDS - ZP_05438644.1 E4_010100015490 transcriptional regulator 38749 39801 1
CDS - ZP_05438645.1 E4_010100015495 electron transport protein HydN 39950 40477 1
CDS - ZP_05438646.1 E4_010100015500 carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases 40630 42882 1
CDS - ZP_05438647.1 E4_010100015505 nitric oxide reductase 43010 44143 -1
CDS - ZP_05438648.1 E4_010100015510 anaerobic nitric oxide reductase flavorubredoxin 44140 45579 -1
CDS - ZP_05438649.1 E4_010100015515 anaerobic nitric oxide reductase transcription regulator 45766 47280 1
CDS gutQ ZP_05438650.1 E4_010100015520 D-arabinose 5-phosphate isomerase 47277 48242 -1
CDS srlR ZP_05438651.1 E4_010100015525 DNA-bindng transcriptional repressor SrlR 48235 49008 -1
CDS - ZP_05438652.1 E4_010100015530 DNA-binding transcriptional activator GutM 49075 49434 -1
CDS - ZP_05438653.1 E4_010100015535 sorbitol-6-phosphate dehydrogenase 49539 50318 -1
CDS - ZP_05438654.1 E4_010100015540 glucitol/sorbitol-specific PTS system component IIA 50322 50693 -1
CDS - ZP_05438655.1 E4_010100015545 glucitol/sorbitol-specific enzyme IIB component of PTS 50704 51663 -1
CDS - ZP_05438656.1 E4_010100015550 glucitol/sorbitol-specific enzyme IIC component of PTS 51660 52223 -1
CDS - ZP_05438657.1 E4_010100015555 murein hydrolase B 52479 53564 1
CDS - ZP_05438658.1 E4_010100015560 competence damage-inducible protein A 53709 54206 1
CDS recA ZP_05438659.1 E4_010100015565 recombinase A 54286 55347 1
CDS recX ZP_05438660.1 E4_010100015570 recombination regulator RecX 55416 55916 1
CDS - ZP_05438661.1 E4_010100015575 hypothetical protein 55957 56106 -1
CDS alaS ZP_05438662.1 E4_010100015580 alanyl-tRNA synthetase 56044 58674 1
CDS - ZP_05438663.1 E4_010100015585 carbon storage regulator 58909 59094 1
tRNA - - E4_010100t15592 tRNA-Ser 59410 59502 1
tRNA - - E4_010100t15594 tRNA-Arg 59506 59582 1