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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05438745.1 E4_010100016028 hypothetical protein 69 452 1
CDS - ZP_05438746.1 E4_010100016033 hypothetical protein 515 958 -1
CDS - ZP_05438747.1 E4_010100016038 homoserine O-succinyltransferase 1115 2044 1
CDS - ZP_05438748.1 E4_010100016043 malate synthase 2313 3914 1
CDS - ZP_05438749.1 E4_010100016048 isocitrate lyase 3944 5248 1
CDS aceK ZP_05438750.1 E4_010100016053 bifunctional isocitrate dehydrogenase kinase/phosphatase protein 5529 7265 1
CDS - ZP_05438751.1 E4_010100016058 ankyrin repeat protein 7234 9420 -1
CDS - ZP_05438752.1 E4_010100016063 transcriptional repressor IclR 9737 10561 -1
CDS metH ZP_05438753.1 E4_010100016068 B12-dependent methionine synthase 10761 14444 1
CDS - ZP_05438754.1 E4_010100016073 predicted transporter 14739 16295 1
CDS - ZP_05438755.1 E4_010100016078 peptidase E 16386 17075 -1
CDS - ZP_05438756.1 E4_010100016083 23S rRNA pseudouridine synthase F 17287 18159 1
CDS - ZP_05438757.1 E4_010100016088 hypothetical protein 18292 18564 -1
CDS - ZP_05438758.1 E4_010100016093 aspartate kinase III 18817 20166 -1
CDS pgi ZP_05438759.1 E4_010100016098 glucose-6-phosphate isomerase 20691 22340 1
CDS - ZP_05438760.1 E4_010100016103 hypothetical protein 22839 23081 1
CDS - ZP_05438761.1 E4_010100016108 putative lipoprotein 23195 23833 1
CDS - ZP_05438762.1 E4_010100016113 hypothetical protein 23830 24567 1
CDS - ZP_05438763.1 E4_010100016118 putative porin 24567 26663 1
CDS - ZP_05438764.1 E4_010100016123 hypothetical protein 26710 26988 -1
CDS - ZP_05438765.1 E4_010100016128 hypothetical protein 26989 27132 1
CDS - ZP_05438766.1 E4_010100016133 phosphate-starvation-inducible protein PsiE 27258 27668 1
CDS xylE ZP_05438767.1 E4_010100016138 D-xylose transporter XylE 27712 29187 -1
CDS malG ZP_05438768.1 E4_010100016143 maltose transporter permease 29559 30449 -1
CDS malF ZP_05438769.1 E4_010100016148 maltose transporter membrane protein 30464 32008 -1
CDS malE ZP_05438770.1 E4_010100016153 maltose ABC transporter periplasmic protein 32162 33352 -1
CDS - ZP_05438771.1 E4_010100016158 hypothetical protein 33445 33540 -1
CDS - ZP_05438772.1 E4_010100016163 maltose/maltodextrin transporter ATP-binding protein 33717 34832 1
CDS lamB ZP_05438773.1 E4_010100016168 maltoporin 34907 36244 1
CDS - ZP_05438774.1 E4_010100016173 maltose regulon periplasmic protein 36487 37407 1
CDS - ZP_05438775.1 E4_010100016178 hypothetical protein 37636 37830 1
CDS - ZP_05438776.1 E4_010100016183 hypothetical protein 37921 39216 1
CDS ubiC ZP_05438777.1 E4_010100016188 chorismate pyruvate lyase 39439 39936 1
CDS ubiA ZP_05438778.1 E4_010100016193 4-hydroxybenzoate octaprenyltransferase 39949 40821 1
CDS - ZP_05438779.1 E4_010100016198 glycerol-3-phosphate acyltransferase 40976 43399 -1
CDS - ZP_05438780.1 E4_010100016203 diacylglycerol kinase 43570 43938 1
CDS - ZP_05438781.1 E4_010100016208 LexA repressor 44048 44656 1
CDS - ZP_05438782.1 E4_010100016213 DNA-damage-inducible SOS response protein 44729 46054 1
CDS - ZP_05438783.1 E4_010100016218 putative stress-response protein 46170 46379 1
CDS - ZP_05438784.1 E4_010100016223 zinc uptake transcriptional repressor 46421 46936 -1
CDS - ZP_05438785.1 E4_010100016228 hypothetical protein 47254 47508 1
CDS - ZP_05438786.1 E4_010100016233 hypothetical protein 47532 48239 1
CDS - ZP_05438787.1 E4_010100016238 tRNA-dihydrouridine synthase A 48620 49639 1
CDS pspG ZP_05438788.1 E4_010100016243 phage shock protein G 49773 50015 1
CDS - ZP_05438789.1 E4_010100016248 quinone oxidoreductase, NADPH-dependent 50181 51164 -1
CDS - ZP_05438790.1 E4_010100016253 replicative DNA helicase 51247 52662 1
CDS alr ZP_05438791.1 E4_010100016258 alanine racemase 52715 53794 1
CDS - ZP_05438792.1 E4_010100016263 aromatic amino acid aminotransferase 54047 55240 1
CDS - ZP_05438793.1 E4_010100016268 hypothetical protein 55742 55945 -1
CDS aphA ZP_05438794.1 E4_010100016273 acid phosphatase/phosphotransferase 56347 57060 1
CDS - ZP_05438795.1 E4_010100016278 hypothetical protein 57171 57587 1
CDS - ZP_05438796.1 E4_010100016283 hypothetical protein 57591 57947 1
CDS uvrA ZP_05438797.1 E4_010100016288 excinuclease ABC subunit A 57982 60804 -1
CDS - ZP_05438798.1 E4_010100016293 single-stranded DNA-binding protein 61058 61594 1
CDS - ZP_05438799.1 E4_010100016298 hypothetical protein 61693 61974 -1
CDS - ZP_05438800.1 E4_010100016303 hypothetical protein 62404 63990 1
CDS - ZP_05438801.1 E4_010100016308 DNA-binding transcriptional regulator SoxS 63993 64316 -1
CDS - ZP_05438802.1 E4_010100016313 DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing 64402 64866 1
CDS - ZP_05438803.1 E4_010100016318 predicted permease 65412 66761 1
CDS - ZP_05438804.1 E4_010100016323 predicted cation/proton antiporter 66912 68561 1
CDS - ZP_05438805.1 E4_010100016328 hypothetical protein 68715 70007 -1
CDS actP ZP_05438806.1 E4_010100016333 acetate permease 70185 71834 -1
CDS - ZP_05438807.1 E4_010100016338 hypothetical protein 71831 72145 -1
CDS - ZP_05438808.1 E4_010100016343 acetyl-CoA synthetase 72345 74303 -1
CDS nrfA ZP_05438809.1 E4_010100016348 cytochrome c552 74696 76132 1
CDS - ZP_05438810.1 E4_010100016353 cytochrome c nitrite reductase pentaheme subunit 76177 76743 1
CDS - ZP_05438811.1 E4_010100016358 formate-dependent nitrite reductase, 4Fe4S subunit 76740 77411 1
CDS - ZP_05438812.1 E4_010100016363 formate-dependent nitrite reductase, membrane subunit 77408 78364 1
CDS - ZP_05438813.1 E4_010100016368 heme lyase subunit NrfE 78495 80102 1
CDS - ZP_05438814.1 E4_010100016373 formate-dependent nitrite reductase complex subunit NrfF 80095 80478 1
CDS - ZP_05438815.1 E4_010100016378 formate-dependent nitrite reductase complex subunit NrfG 80475 81071 1
CDS gltP ZP_05438816.1 E4_010100016383 glutamate/aspartate:proton symporter 81413 82726 1
CDS - ZP_05438817.1 E4_010100016388 hypothetical protein 83031 83720 -1
CDS - ZP_05438818.1 E4_010100016393 formate dehydrogenase-H, selenopolypeptide subunit 83814 85493 -1
CDS - ZP_05438819.1 E4_010100016398 formate dehydrogenase-H, selenopolypeptide subunit 85542 85961 -1
CDS - ZP_05438820.1 E4_010100016403 putative outer membrane efflux protein MdtP 86159 87625 -1
CDS - ZP_05438821.1 E4_010100016408 multidrug efflux system protein MdtO 87622 89673 -1
CDS - ZP_05438822.1 E4_010100016413 multidrug resistance protein MdtN 89673 90704 -1
CDS - ZP_05438823.1 E4_010100016418 formate dehydrogenase H 90723 90998 -1
CDS - ZP_05438824.1 E4_010100016423 putative alkyl sulfatase 91207 93192 -1
CDS - ZP_05438825.1 E4_010100016428 D-allose kinase 93465 94394 -1
CDS - ZP_05438826.1 E4_010100016433 allulose-6-phosphate 3-epimerase 94378 95073 -1
CDS - ZP_05438827.1 E4_010100016438 D-allose transporter subunit 95084 96064 -1
CDS - ZP_05438828.1 E4_010100016443 D-allose transporter ATP-binding protein 96043 97575 -1
CDS - ZP_05438829.1 E4_010100016448 D-allose transporter subunit 97702 98637 -1
CDS - ZP_05438830.1 E4_010100016453 DNA-binding transcriptional repressor RpiR 98696 99586 -1
CDS - ZP_05438831.1 E4_010100016458 hypothetical protein 99647 99751 1
CDS - ZP_05438832.1 E4_010100016463 ribose-5-phosphate isomerase B 99945 100394 1
CDS - ZP_05438833.1 E4_010100016468 hypothetical protein 100463 100792 1
CDS phnP ZP_05438834.1 E4_010100016473 carbon-phosphorus lyase complex accessory protein 100939 101697 -1
CDS - ZP_05438835.1 E4_010100016478 aminoalkylphosphonic acid N-acetyltransferase 101699 102133 -1
CDS - ZP_05438836.1 E4_010100016483 ribose 1,5-bisphosphokinase 102120 102677 -1
CDS - ZP_05438837.1 E4_010100016488 carbon-phosphorus lyase complex subunit 102677 103813 -1
CDS - ZP_05438838.1 E4_010100016493 carbon-phosphorus lyase complex subunit 103810 104490 -1
CDS - ZP_05438839.1 E4_010100016498 hypothetical protein 104449 104646 1
CDS phnK ZP_05438840.1 E4_010100016503 phosphonate C-P lyase system protein PhnK 104601 105359 -1
CDS - ZP_05438841.1 E4_010100016508 carbon-phosphorus lyase complex subunit 105356 106201 -1
CDS - ZP_05438842.1 E4_010100016513 carbon-phosphorus lyase complex subunit 106194 107258 -1
CDS phnH ZP_05438843.1 E4_010100016518 carbon-phosphorus lyase complex subunit 107258 107842 -1
CDS - ZP_05438844.1 E4_010100016523 carbon-phosphorus lyase complex subunit 107839 108291 -1