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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rpsT ZP_05439206.1 E4_010100018367 30S ribosomal protein S20 251 436 -1
CDS - ZP_05439207.1 E4_010100018372 bifunctional riboflavin kinase/FMN adenylyltransferase 843 1784 1
CDS ileS ZP_05439208.1 E4_010100018377 isoleucyl-tRNA synthetase 1827 4643 1
CDS lspA ZP_05439209.1 E4_010100018382 lipoprotein signal peptidase 4643 5137 1
CDS - ZP_05439210.1 E4_010100018387 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 5262 5711 1
CDS ispH ZP_05439211.1 E4_010100018392 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5713 6663 1
CDS - ZP_05439212.1 E4_010100018397 ribonucleoside hydrolase RihC 6729 7643 1
CDS - ZP_05439213.1 E4_010100018402 dihydrodipicolinate reductase 7810 8631 1
CDS - ZP_05439214.1 E4_010100018407 carbamoyl phosphate synthase small subunit 9087 10235 1
CDS carB ZP_05439215.1 E4_010100018412 carbamoyl phosphate synthase large subunit 10253 13474 1
CDS - ZP_05439216.1 E4_010100018417 DNA-binding transcriptional activator CaiF 13736 14131 1
CDS - ZP_05439217.1 E4_010100018422 carnitine operon protein CaiE 14340 14930 -1
CDS - ZP_05439218.1 E4_010100018427 carnitinyl-CoA dehydratase 14936 15721 -1
CDS caiC ZP_05439219.1 E4_010100018432 putative crotonobetaine/carnitine-CoA ligase 15830 17383 -1
CDS - ZP_05439220.1 E4_010100018437 crotonobetainyl-CoA:carnitine CoA-transferase 17457 18674 -1
CDS - ZP_05439221.1 E4_010100018442 crotonobetainyl-CoA dehydrogenase 18803 19945 -1
CDS - ZP_05439222.1 E4_010100018447 L-carnitine/gamma-butyrobetaine antiporter 19976 21490 -1
CDS - ZP_05439223.1 E4_010100018452 putative electron transfer flavoprotein FixA 21964 22734 1
CDS fixB ZP_05439224.1 E4_010100018457 putative electron transfer flavoprotein FixB 22749 23690 1
CDS - ZP_05439225.1 E4_010100018462 putative oxidoreductase FixC 23741 25027 1
CDS - ZP_05439226.1 E4_010100018467 predicted 4Fe-4S ferredoxin-type protein 25024 25311 1
CDS - ZP_05439227.1 E4_010100018472 predicted transporter 25370 26701 1
CDS - ZP_05439228.1 E4_010100018477 glutathione-regulated potassium-efflux system ancillary protein KefF 26809 27339 1
CDS - ZP_05439229.1 E4_010100018482 glutathione-regulated potassium-efflux system protein KefC 27332 29194 1
CDS folA ZP_05439230.1 E4_010100018487 dihydrofolate reductase 29386 29865 1
CDS apaH ZP_05439231.1 E4_010100018492 diadenosine tetraphosphatase 29943 30785 -1
CDS apaG ZP_05439232.1 E4_010100018497 ApaG 30792 31169 -1
CDS ksgA ZP_05439233.1 E4_010100018502 dimethyladenosine transferase 31172 31993 -1
CDS pdxA ZP_05439234.1 E4_010100018507 4-hydroxythreonine-4-phosphate dehydrogenase 31990 32979 -1
CDS - ZP_05439235.1 E4_010100018512 peptidyl-prolyl cis-trans isomerase SurA 32979 34265 -1
CDS - ZP_05439236.1 E4_010100018517 organic solvent tolerance protein 34318 36672 -1
CDS djlA ZP_05439237.1 E4_010100018522 Dna-J like membrane chaperone protein 36927 37742 1
CDS - ZP_05439238.1 E4_010100018527 23S rRNA/tRNA pseudouridine synthase A 37859 38518 -1
CDS - ZP_05439239.1 E4_010100018532 ATP-dependent helicase HepA 38530 41436 -1
CDS - ZP_05439240.1 E4_010100018537 DNA polymerase II 41601 43952 -1
CDS araD ZP_05439241.1 E4_010100018542 L-ribulose-5-phosphate 4-epimerase 44027 44722 -1
CDS - ZP_05439242.1 E4_010100018547 L-arabinose isomerase 44891 46393 -1
CDS - ZP_05439243.1 E4_010100018552 ribulokinase 46404 48104 -1
CDS - ZP_05439244.1 E4_010100018557 DNA-binding transcriptional regulator AraC 48443 49321 1
CDS - ZP_05439245.1 E4_010100018562 hypothetical protein 49407 50171 1
CDS thiQ ZP_05439246.1 E4_010100018567 thiamine transporter ATP-binding subunit 50285 50983 -1
CDS thiP ZP_05439247.1 E4_010100018572 thiamine transporter membrane protein 50967 52577 -1
CDS tbpA ZP_05439248.1 E4_010100018577 thiamine transporter substrate binding subunit 52553 53536 -1
CDS - ZP_05439249.1 E4_010100018582 transcriptional regulator SgrR 53700 55355 -1
CDS - ZP_05439250.1 E4_010100018587 hypothetical protein 55444 55575 1
CDS - ZP_05439251.1 E4_010100018592 broad specificity sugar efflux system 55677 56855 1
CDS leuD ZP_05439252.1 E4_010100018597 isopropylmalate isomerase small subunit 56904 57509 -1
CDS - ZP_05439253.1 E4_010100018602 isopropylmalate isomerase large subunit 57520 58920 -1
CDS - ZP_05439254.1 E4_010100018607 3-isopropylmalate dehydrogenase 58923 60014 -1
CDS - ZP_05439255.1 E4_010100018612 2-isopropylmalate synthase 60014 61585 -1
CDS leuO ZP_05439256.1 E4_010100018617 leucine transcriptional activator 62425 63369 1
CDS - ZP_05439257.1 E4_010100018622 acetolactate synthase 3 catalytic subunit 63687 65411 1
CDS ilvH ZP_05439258.1 E4_010100018627 acetolactate synthase 3 regulatory subunit 65414 65905 1
CDS - ZP_05439259.1 E4_010100018632 DNA-binding transcriptional regulator FruR 66085 67089 1
CDS - ZP_05439260.1 E4_010100018637 cell division protein MraZ 67691 68149 1
CDS mraW ZP_05439261.1 E4_010100018642 S-adenosyl-methyltransferase MraW 68151 69092 1
CDS - ZP_05439262.1 E4_010100018647 cell division protein FtsL 69089 69454 1
CDS - ZP_05439263.1 E4_010100018652 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 69470 71236 1
CDS murE ZP_05439264.1 E4_010100018657 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 71223 72710 1
CDS murF ZP_05439265.1 E4_010100018662 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 72707 74065 1
CDS mraY ZP_05439266.1 E4_010100018667 phospho-N-acetylmuramoyl-pentapeptide- transferase 74059 75141 1
CDS murD ZP_05439267.1 E4_010100018672 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 75144 76460 1
CDS - ZP_05439268.1 E4_010100018677 cell division protein FtsW 76460 77704 1
CDS murG ZP_05439269.1 E4_010100018682 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 77701 78768 1
CDS murC ZP_05439270.1 E4_010100018687 UDP-N-acetylmuramate--L-alanine ligase 78822 80297 1
CDS ddl ZP_05439271.1 E4_010100018692 D-alanine--D-alanine ligase 80290 81210 1
CDS - ZP_05439272.1 E4_010100018697 cell division protein FtsQ 81212 82042 1
CDS ftsA ZP_05439273.1 E4_010100018702 cell division protein FtsA 82039 83301 1
CDS - ZP_05439274.1 E4_010100018707 cell division protein FtsZ 83362 84513 1
CDS lpxC ZP_05439275.1 E4_010100018712 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 84614 85531 1
CDS - ZP_05439276.1 E4_010100018717 SecA regulator SecM 85762 86274 1
CDS - ZP_05439277.1 E4_010100018722 preprotein translocase subunit SecA 86336 89041 1
CDS - ZP_05439278.1 E4_010100018727 nucleoside triphosphate pyrophosphohydrolase 89101 89490 1
CDS - ZP_05439279.1 E4_010100018732 zinc-binding protein 89706 89903 -1
CDS - ZP_05439280.1 E4_010100018737 hypothetical protein 89913 90656 -1
CDS coaE ZP_05439281.1 E4_010100018742 dephospho-CoA kinase 90656 91276 -1
CDS - ZP_05439282.1 E4_010100018747 guanosine 5'-monophosphate oxidoreductase 91501 92544 1
CDS - ZP_05439283.1 E4_010100018752 type IV pilin biogenesis protein 92579 93781 -1
CDS - ZP_05439284.1 E4_010100018757 hypothetical protein 93771 95156 -1
CDS - ZP_05439285.1 E4_010100018762 putative major pilin subunit 95166 95606 -1
CDS - ZP_05439286.1 E4_010100018767 quinolinate phosphoribosyltransferase 95809 96702 -1
CDS - ZP_05439287.1 E4_010100018772 N-acetyl-anhydromuranmyl-L-alanine amidase 96790 97341 1
CDS - ZP_05439288.1 E4_010100018777 regulatory protein AmpE 97338 98192 1
CDS - ZP_05439289.1 E4_010100018782 aromatic amino acid transporter 98235 99605 -1
CDS pdhR ZP_05439290.1 E4_010100018787 transcriptional regulator PdhR 100149 100913 1
CDS aceE ZP_05439291.1 E4_010100018792 pyruvate dehydrogenase subunit E1 101074 103737 1
CDS aceF ZP_05439292.1 E4_010100018797 dihydrolipoamide acetyltransferase 103752 105644 1
CDS - ZP_05439293.1 E4_010100018802 dihydrolipoamide dehydrogenase 105969 107393 1
CDS - ZP_05439294.1 E4_010100018807 hypothetical protein 107464 109317 -1
CDS - ZP_05439295.1 E4_010100018812 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 109672 112269 1
CDS - ZP_05439296.1 E4_010100018817 hypothetical protein 112445 112807 1
CDS - ZP_05439297.1 E4_010100018822 S-adenosylmethionine decarboxylase 112845 113639 -1
CDS - ZP_05439298.1 E4_010100018827 spermidine synthase 113655 114521 -1
CDS - ZP_05439299.1 E4_010100018832 hypothetical protein 114627 114974 -1
CDS - ZP_05439300.1 E4_010100018837 multicopper oxidase 115140 116690 1
CDS - ZP_05439301.1 E4_010100018842 glucose dehydrogenase 116892 119282 -1
CDS - ZP_05439302.1 E4_010100018847 hypoxanthine phosphoribosyltransferase 119488 120024 1
CDS - ZP_05439303.1 E4_010100018852 carbonic anhydrase 120065 120727 -1
CDS - ZP_05439304.1 E4_010100018857 predicted transporter subunit: ATP-binding component of ABC superfamily protein 120836 121762 1
CDS - ZP_05439305.1 E4_010100018862 predicted transporter subunit: membrane component of ABC superfamily protein 121759 122529 1