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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05439379.1 E4_010100019232 predicted transcriptional regulator 293 985 1
CDS - ZP_05439380.1 E4_010100019237 predicted multidrug or homocysteine efflux system 1008 2435 1
CDS - ZP_05439381.1 E4_010100019242 transcriptional repressor RbsR 2401 3384 -1
CDS - ZP_05439382.1 E4_010100019247 ribokinase 3397 4341 -1
CDS - ZP_05439383.1 E4_010100019252 D-ribose transporter subunit RbsB 4452 5342 -1
CDS rbsC ZP_05439384.1 E4_010100019257 ribose ABC transporter permease protein 5367 6332 -1
CDS - ZP_05439385.1 E4_010100019262 D-ribose transporter ATP binding protein 6337 7842 -1
CDS - ZP_05439386.1 E4_010100019267 D-ribose pyranase 7850 8269 -1
CDS trkD ZP_05439387.1 E4_010100019272 potassium transport protein Kup 8436 10304 -1
CDS - ZP_05439388.1 E4_010100019277 regulatory ATPase RavA 10527 12023 1
CDS yieM ZP_05439389.1 E4_010100019282 hypothetical protein 12017 13468 1
CDS - ZP_05439390.1 E4_010100019287 asparagine synthetase AsnA 13473 14465 -1
CDS - ZP_05439391.1 E4_010100019292 DNA-binding transcriptional regulator AsnC 14617 15075 1
CDS - ZP_05439392.1 E4_010100019297 flavodoxin 15165 15608 1
CDS - ZP_05439393.1 E4_010100019302 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 15987 17876 1
CDS gidB ZP_05439394.1 E4_010100019307 16S rRNA methyltransferase GidB 17940 18563 1
CDS - ZP_05439395.1 E4_010100019312 F0F1 ATP synthase subunit I 19180 19560 1
CDS - ZP_05439396.1 E4_010100019317 F0F1 ATP synthase subunit A 19569 20384 1
CDS - ZP_05439397.1 E4_010100019322 F0F1 ATP synthase subunit C 20431 20670 1
CDS - ZP_05439398.1 E4_010100019327 F0F1 ATP synthase subunit B 20732 21202 1
CDS - ZP_05439399.1 E4_010100019332 F0F1 ATP synthase subunit delta 21217 21750 1
CDS - ZP_05439400.1 E4_010100019337 F0F1 ATP synthase subunit alpha 21763 23304 1
CDS - ZP_05439401.1 E4_010100019342 F0F1 ATP synthase subunit gamma 23355 24218 1
CDS - ZP_05439402.1 E4_010100019347 F0F1 ATP synthase subunit beta 24245 25627 1
CDS atpC ZP_05439403.1 E4_010100019352 F0F1 ATP synthase subunit epsilon 25648 26067 1
CDS glmU ZP_05439404.1 E4_010100019357 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 26420 27790 1
CDS - ZP_05439405.1 E4_010100019362 glucosamine--fructose-6-phosphate aminotransferase 27952 29781 1
CDS - ZP_05439406.1 E4_010100019367 phosphate ABC transporter periplasmic substrate-binding protein PstS 30095 31135 1
CDS pstC ZP_05439407.1 E4_010100019372 phosphate transporter permease subunit PstC 31222 32181 1
CDS pstA ZP_05439408.1 E4_010100019377 phosphate transporter permease subunit PtsA 32181 33071 1
CDS - ZP_05439409.1 E4_010100019382 phosphate transporter subunit 33254 34027 1
CDS - ZP_05439410.1 E4_010100019387 transcriptional regulator PhoU 34042 34767 1
CDS - ZP_05439411.1 E4_010100019392 transcriptional antiterminator BglG 35053 35889 1
CDS - ZP_05439412.1 E4_010100019397 beta-glucoside-specific PTS system components IIABC 36023 37900 1
CDS - ZP_05439413.1 E4_010100019402 cryptic phospho-beta-glucosidase B 37919 39331 1
CDS - ZP_05439414.1 E4_010100019407 carbohydrate-specific outer membrane porin, cryptic 39400 41016 1
CDS - ZP_05439415.1 E4_010100019412 xylanase 41043 42212 1
CDS - ZP_05439416.1 E4_010100019417 putative 6-phosphogluconolactonase 42227 42949 1
CDS - ZP_05439417.1 E4_010100019422 hypothetical protein 43011 43598 -1
CDS - ZP_05439418.1 E4_010100019427 putative inner membrane protein 43647 44114 -1
CDS - ZP_05439419.1 E4_010100019432 6-phosphogluconate phosphatase 44181 44846 -1
CDS - ZP_05439420.1 E4_010100019437 putative inner membrane protein 45011 46348 1
CDS - ZP_05439421.1 E4_010100019442 chromate reductase, Class I, flavoprotein 46402 46968 -1
CDS - ZP_05439422.1 E4_010100019447 putative phosphopantetheinyl transferase 46990 47739 -1
CDS - ZP_05439423.1 E4_010100019452 DNA-binding transcriptional regulator YidZ 47896 48855 -1
CDS - ZP_05439424.1 E4_010100019457 multidrug efflux system protein MdtL 48830 50005 -1
CDS - ZP_05439425.1 E4_010100019462 tryptophan permease TnaB 50137 51384 -1
CDS tnaA ZP_05439426.1 E4_010100019467 tryptophanase 51475 52890 -1
CDS trmE ZP_05439427.1 E4_010100019472 tRNA modification GTPase TrmE 53428 54792 -1
CDS - ZP_05439428.1 E4_010100019477 putative inner membrane protein translocase component YidC 54898 56544 -1
CDS - ZP_05439429.1 E4_010100019482 hypothetical protein 56547 56804 -1
CDS rnpA ZP_05439430.1 E4_010100019487 ribonuclease P 56768 57094 -1
CDS rpmH ZP_05439431.1 E4_010100019492 50S ribosomal protein L34 57144 57284 -1
CDS dnaA ZP_05439432.1 E4_010100019497 chromosomal replication initiation protein 57891 59294 1
CDS - ZP_05439433.1 E4_010100019502 DNA polymerase III subunit beta 59299 60399 1
CDS recF ZP_05439434.1 E4_010100019507 recombination protein F 60399 61472 1
CDS gyrB ZP_05439435.1 E4_010100019512 DNA gyrase subunit B 61501 63915 1
CDS - ZP_05439436.1 E4_010100019517 hypothetical protein 64155 64553 1
CDS - ZP_05439437.1 E4_010100019522 sugar phosphatase 64668 65480 1
CDS - ZP_05439438.1 E4_010100019527 hypothetical protein 65526 66182 -1
CDS - ZP_05439439.1 E4_010100019532 predicted DNA-binding transcriptional regulator 66460 67149 1
CDS - ZP_05439440.1 E4_010100019537 2-oxo-3-deoxygalactonate kinase 67146 68024 1
CDS - ZP_05439441.1 E4_010100019542 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 68008 68625 1
CDS - ZP_05439442.1 E4_010100019547 galactonate dehydratase 68622 69770 1
CDS - ZP_05439443.1 E4_010100019552 D-galactonate transport protein 69890 71182 1
CDS - ZP_05439444.1 E4_010100019557 putative oxidoreductase 71179 72243 -1
CDS - ZP_05439445.1 E4_010100019562 hypothetical protein 72344 73558 1
CDS - ZP_05439446.1 E4_010100019567 hypothetical protein 73560 73820 -1
CDS - ZP_05439447.1 E4_010100019572 heat shock protein IbpA 74198 74611 1
CDS - ZP_05439448.1 E4_010100019577 heat shock chaperone IbpB 74723 75151 1
CDS - ZP_05439449.1 E4_010100019582 hypothetical protein 75347 77008 1
CDS - ZP_05439450.1 E4_010100019587 putative DNA-binding transcriptional regulator 77005 77721 -1
CDS - ZP_05439451.1 E4_010100019592 hypothetical protein 77870 77968 -1
CDS - ZP_05439452.1 E4_010100019597 putative PTS component 78017 79633 1
CDS - ZP_05439453.1 E4_010100019617 predicted DNA-binding transcriptional regulator 80443 81336 -1
CDS - ZP_05439454.1 E4_010100019622 putative symporter YidK 81503 83455 1
CDS - ZP_05439455.1 E4_010100019627 predicted sulfatase/phosphatase 83566 84549 1
CDS - ZP_05439456.1 E4_010100019632 predicted inner membrane protein 84596 85045 -1
CDS - ZP_05439457.1 E4_010100019637 conserved inner membrane protein 85153 85500 1
CDS - ZP_05439458.1 E4_010100019642 predicted inner membrane protein 85490 85852 1
CDS - ZP_05439459.1 E4_010100019647 putative DNA-binding transcriptional regulator 85849 86346 1
CDS emrD ZP_05439460.1 E4_010100019652 multidrug resistance protein D 86354 87505 -1
CDS - ZP_05439461.1 E4_010100019657 hypothetical protein 88195 88677 -1
CDS - ZP_05439462.1 E4_010100019662 acetolactate synthase catalytic subunit 88676 90364 1
CDS - ZP_05439463.1 E4_010100019667 acetolactate synthase 1 regulatory subunit 90368 90658 1
CDS - ZP_05439464.1 E4_010100019672 DNA-binding transcriptional activator UhpA 90734 91324 1
CDS - ZP_05439465.1 E4_010100019677 sensory histidine kinase UhpB 91324 92826 1
CDS - ZP_05439466.1 E4_010100019682 regulatory protein UhpC 92836 94155 1
CDS uhpT ZP_05439467.1 E4_010100019687 sugar phosphate antiporter 94293 95684 1
CDS - ZP_05439468.1 E4_010100019692 cryptic adenine deaminase 95730 97496 -1
CDS - ZP_05439469.1 E4_010100019697 hypothetical protein 97659 99005 1
CDS - ZP_05439470.1 E4_010100019702 hypothetical protein 99058 99510 1
CDS nepI ZP_05439471.1 E4_010100019707 ribonucleoside transporter 99556 100911 1
CDS - ZP_05439472.1 E4_010100019712 hypothetical protein 100952 101245 -1
CDS - ZP_05439473.1 E4_010100019717 cytoplasmic membrane lipoprotein-28 101467 102285 1
CDS - ZP_05439474.1 E4_010100019722 putative inner membrane protein 102289 103212 -1
CDS - ZP_05439475.1 E4_010100019727 predicted sugar efflux system 103323 104507 -1
CDS - ZP_05439476.1 E4_010100019732 hypothetical protein 104889 105038 -1
tRNA - - E4_010100t19999 tRNA-Sec 105144 105238 -1
CDS - ZP_05439477.1 E4_010100019737 putative transporter 105531 106913 1