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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05439541.1 E4_010100020059 putative protein in rhs element 1 81 -1
CDS - ZP_05439542.1 E4_010100020064 putative glutathione S-transferase 309 917 1
CDS - ZP_05439543.1 E4_010100020069 selenocysteine synthase 1015 2406 1
CDS - ZP_05439544.1 E4_010100020074 selenocysteinyl-tRNA-specific translation factor 2403 4247 1
CDS - ZP_05439545.1 E4_010100020079 putative alcohol dehydrogenase 4437 5588 1
CDS - ZP_05439546.1 E4_010100020084 aldehyde dehydrogenase B 5753 7291 1
CDS - ZP_05439547.1 E4_010100020089 hypothetical protein 7510 7653 -1
CDS - ZP_05439548.1 E4_010100020094 conserved inner membrane protein 7836 8159 1
CDS - ZP_05439549.1 E4_010100020099 membrane fusion protein (MFP) component of efflux pump, signal anchor 8165 9301 1
CDS - ZP_05439550.1 E4_010100020104 predicted DNA-binding transcriptional regulator 9298 10272 -1
CDS - ZP_05439551.1 E4_010100020109 hypothetical protein 10396 11136 1
CDS - ZP_05439552.1 E4_010100020114 hypothetical protein 11176 11316 1
CDS sgbE ZP_05439553.1 E4_010100020119 L-ribulose-5-phosphate 4-epimerase 11483 12178 -1
CDS - ZP_05439554.1 E4_010100020124 putative L-xylulose 5-phosphate 3-epimerase 12172 13032 -1
CDS sgbH ZP_05439555.1 E4_010100020129 3-keto-L-gulonate-6-phosphate decarboxylase 13025 13687 -1
CDS - ZP_05439556.1 E4_010100020134 L-xylulose kinase 13641 15179 -1
CDS - ZP_05439557.1 E4_010100020139 predicted transporter 15183 16169 -1
CDS - ZP_05439558.1 E4_010100020144 TRAP dicarboxylate transporter, DctM subunit 16182 17459 -1
CDS - ZP_05439559.1 E4_010100020149 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 17462 17935 -1
CDS - ZP_05439560.1 E4_010100020154 hypothetical protein 18053 18520 -1
CDS - ZP_05439561.1 E4_010100020159 2,3-diketo-L-gulonate reductase 18532 19530 -1
CDS - ZP_05439562.1 E4_010100020164 putative DNA-binding transcriptional repressor 19731 20579 1
CDS - ZP_05439563.1 E4_010100020169 predicted hydrogenase, 4Fe-4S ferredoxin-type component 20681 21154 1
CDS avtA ZP_05439564.1 E4_010100020174 valine--pyruvate transaminase 21305 22558 -1
CDS malS ZP_05439565.1 E4_010100020179 periplasmic alpha-amylase precursor 22736 24766 -1
CDS - ZP_05439566.1 E4_010100020184 hypothetical protein 25338 25910 1
CDS - ZP_05439567.1 E4_010100020189 DNA-binding transcriptional activator, xylose-binding protein 26106 27284 -1
CDS - ZP_05439568.1 E4_010100020194 D-xylose transporter subunit, membrane component of ABC superfamily protein 27362 28543 -1
CDS - ZP_05439569.1 E4_010100020199 xylose transporter ATP-binding subunit 28521 30062 -1
CDS xylF ZP_05439570.1 E4_010100020204 D-xylose transporter subunit XylF 30140 31132 -1
CDS - ZP_05439571.1 E4_010100020209 xylose isomerase 31498 32820 1
CDS - ZP_05439572.1 E4_010100020214 xylulokinase 32892 34346 1
CDS - ZP_05439573.1 E4_010100020219 hypothetical protein 34515 34856 1
CDS - ZP_05439574.1 E4_010100020224 hypothetical protein 34902 35339 1
CDS - ZP_05439575.1 E4_010100020229 conserved inner membrane protein 35381 36376 -1
CDS - ZP_05439576.1 E4_010100020234 hypothetical protein 36551 36850 1
CDS glyQ ZP_05439577.1 E4_010100020239 glycyl-tRNA synthetase subunit alpha 36945 37856 1
CDS glyS ZP_05439578.1 E4_010100020244 glycyl-tRNA synthetase subunit beta 37866 39935 1
CDS - ZP_05439579.1 E4_010100020249 IS150 putative transposase 40214 41065 -1
CDS - ZP_05439580.1 E4_010100020254 hypothetical protein 41062 41583 -1
CDS - ZP_05439581.1 E4_010100020259 small toxic polypeptide 41663 41815 1
CDS - ZP_05439582.1 E4_010100020264 major cold shock protein 42002 42214 -1
CDS - ZP_05439583.1 E4_010100020269 putative transcriptional regulator 42495 42785 -1
CDS - ZP_05439584.1 E4_010100020274 hypothetical protein 43219 43929 1
CDS - ZP_05439585.1 E4_010100020279 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) 43979 44953 -1
CDS - ZP_05439586.1 E4_010100020284 putative outer membrane lipoprotein 45057 45716 -1
CDS - ZP_05439587.1 E4_010100020289 biotin sulfoxide reductase 45923 48202 1
CDS - ZP_05439588.1 E4_010100020294 hypothetical protein 48171 48611 -1
CDS - ZP_05439589.1 E4_010100020299 3-methyl-adenine DNA glycosylase I 48608 49171 -1
CDS - ZP_05439590.1 E4_010100020304 hypothetical protein 49329 50027 1
CDS - ZP_05439591.1 E4_010100020309 putative transporter 50256 51464 1
CDS - ZP_05439592.1 E4_010100020314 phosphoethanolamine transferase 51788 53479 1
tRNA - - E4_010100t20476 tRNA-Pro 53571 53647 1
CDS - ZP_05439593.1 E4_010100020319 hypothetical protein 53946 54206 1
CDS - ZP_05439594.1 E4_010100020324 dipeptide transporter 54558 56165 1
CDS - ZP_05439595.1 E4_010100020329 hypothetical protein 56228 56368 -1
CDS - ZP_05439596.1 E4_010100020334 dipeptide transporter permease DppB 56473 57492 1
CDS - ZP_05439597.1 E4_010100020339 dipeptide transporter 57502 58404 1
CDS dppD ZP_05439598.1 E4_010100020344 dipeptide transporter ATP-binding subunit 58415 59398 1
CDS dppF ZP_05439599.1 E4_010100020349 dipeptide transporter ATP-binding subunit 59395 60399 1
CDS - ZP_05439600.1 E4_010100020354 predicted transporter 60429 61700 -1
CDS - ZP_05439601.1 E4_010100020359 hypothetical protein 62176 62283 1
CDS - ZP_05439602.1 E4_010100020364 predicted inner membrane protein 62370 64049 -1
CDS - ZP_05439603.1 E4_010100020369 hypothetical protein 64046 64237 -1
CDS - ZP_05439604.1 E4_010100020374 hypothetical protein 64234 65739 -1
CDS - ZP_05439605.1 E4_010100020379 hypothetical protein 66078 66266 1
CDS - ZP_05439606.1 E4_010100020384 cell division protein 66278 67030 1
CDS bcsA ZP_05439607.1 E4_010100020389 cellulose synthase catalytic subunit 67027 69645 1
CDS - ZP_05439608.1 E4_010100020394 cellulose synthase regulator protein 69719 71995 1
CDS - ZP_05439609.1 E4_010100020399 endo-1,4-D-glucanase 72002 73108 1
CDS - ZP_05439610.1 E4_010100020404 cellulose synthase subunit BcsC 73090 76563 1
CDS - ZP_05439611.1 E4_010100020409 putative phosphodiesterase 76684 78633 1
CDS - ZP_05439612.1 E4_010100020414 C4-dicarboxylate transporter DctA 78816 80102 1
CDS - ZP_05439613.1 E4_010100020419 predicted zinc-dependent peptidase 80323 81819 1
CDS - ZP_05439614.1 E4_010100020424 ketodeoxygluconokinase 81915 82844 -1
CDS - ZP_05439615.1 E4_010100020429 EAL domain-containing protein 83076 83843 1
CDS - ZP_05439616.1 E4_010100020434 predicted outer membrane biogenesis protein 83913 85973 1
CDS - ZP_05439617.1 E4_010100020439 putative transporter 86155 87477 -1
CDS - ZP_05439618.1 E4_010100020444 conserved inner membrane protein 87888 88901 -1
CDS - ZP_05439619.1 E4_010100020449 DNA-binding transcriptional regulator 88950 89921 -1
CDS - ZP_05439620.1 E4_010100020454 predicted DNA-binding response regulator in two-component regulatory system 90369 90971 1
CDS treF ZP_05439621.1 E4_010100020459 trehalase 91022 92671 -1
CDS - ZP_05439622.1 E4_010100020464 predicted cytochrome C peroxidase 93075 94472 1
CDS - ZP_05439623.1 E4_010100020469 glutamate decarboxylase A, PLP-dependent 94683 94925 1