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Escherichia sp. 4_1_40B, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05439659.1 E4_010100020651 putative protein in rhs element 1 81 -1
CDS - ZP_05439660.1 E4_010100020656 nickel responsive regulator 284 685 -1
CDS nikE ZP_05439661.1 E4_010100020661 nickel transporter ATP-binding protein NikE 691 1497 -1
CDS nikD ZP_05439662.1 E4_010100020666 nickel transporter ATP-binding protein NikD 1494 2258 -1
CDS nikC ZP_05439663.1 E4_010100020671 nickel transporter permease NikC 2258 3091 -1
CDS - ZP_05439664.1 E4_010100020676 nickel transporter permease NikB 3088 4032 -1
CDS - ZP_05439665.1 E4_010100020681 nickel transporter subunit 4032 5606 -1
CDS - ZP_05439666.1 E4_010100020686 holo-(acyl carrier protein) synthase 2 5717 6304 -1
CDS - ZP_05439667.1 E4_010100020691 predicted inner membrane protein 6359 7408 -1
CDS - ZP_05439668.1 E4_010100020696 major facilitator superfamily transporter 7540 8757 1
CDS - ZP_05439669.1 E4_010100020701 hypothetical protein 8761 9318 -1
CDS - ZP_05439670.1 E4_010100020706 hypothetical protein 9391 10056 -1
CDS - ZP_05439671.1 E4_010100020711 sulfur transfer protein SirA 10277 10522 1
CDS zntA ZP_05439672.1 E4_010100020716 zinc/cadmium/mercury/lead-transporting ATPase 10624 12822 -1
CDS - ZP_05439673.1 E4_010100020721 conserved inner membrane protein 12896 13522 -1
CDS - ZP_05439674.1 E4_010100020726 putative receptor 13663 14022 1
CDS - ZP_05439675.1 E4_010100020731 hypothetical protein 14025 14294 -1
CDS rsmD ZP_05439676.1 E4_010100020736 16S rRNA m(2)G966-methyltransferase 14284 14880 -1
CDS - ZP_05439677.1 E4_010100020741 cell division protein FtsY 15030 16523 1
CDS - ZP_05439678.1 E4_010100020746 cell division protein FtsE 16526 17194 1
CDS ftsX ZP_05439679.1 E4_010100020751 cell division protein FtsX 17187 18245 1
CDS - ZP_05439680.1 E4_010100020756 RNA polymerase factor sigma-32 18490 19344 1
CDS - ZP_05439681.1 E4_010100020761 periplasmic binding protein of high-affinity amino acid transport system 19615 20718 1
CDS - ZP_05439682.1 E4_010100020766 GCN5-related N-acetyltransferase 20906 21289 -1
CDS - ZP_05439683.1 E4_010100020771 Extracellular ligand-binding receptor 21713 22822 1
CDS - ZP_05439684.1 E4_010100020776 branched-chain amino acid transporter permease subunit LivH 22870 23796 1
CDS livM ZP_05439685.1 E4_010100020781 leucine/isoleucine/valine transporter permease subunit 23793 25070 1
CDS livG ZP_05439686.1 E4_010100020786 leucine/isoleucine/valine transporter ATP-binding subunit 25067 25834 1
CDS livF ZP_05439687.1 E4_010100020791 leucine/isoleucine/valine transporter ATP-binding subunit 25836 26549 1
CDS - ZP_05439688.1 E4_010100020796 glycerol-3-phosphate transporter periplasmic binding protein 26948 28264 1
CDS - ZP_05439689.1 E4_010100020801 glycerol-3-phosphate transporter permease 28362 29249 1
CDS - ZP_05439690.1 E4_010100020806 glycerol-3-phosphate transporter membrane protein 29246 30091 1
CDS ugpC ZP_05439691.1 E4_010100020811 glycerol-3-phosphate transporter ATP-binding subunit 30093 31163 1
CDS ugpQ ZP_05439692.1 E4_010100020816 cytoplasmic glycerophosphodiester phosphodiesterase 31160 31903 1
CDS - ZP_05439693.1 E4_010100020821 hypothetical protein 31890 32330 -1
CDS ggt ZP_05439694.1 E4_010100020826 gamma-glutamyltranspeptidase 32450 34192 1
CDS - ZP_05439695.1 E4_010100020831 hypothetical protein 34230 34514 -1
CDS - ZP_05439696.1 E4_010100020836 hypothetical protein 34964 35458 -1
CDS - ZP_05439697.1 E4_010100020841 type VI secretion system effector, Hcp1 family protein 35455 36633 -1
CDS - ZP_05439698.1 E4_010100020846 putative acetyltransferase YhhY 36870 37358 -1
CDS - ZP_05439699.1 E4_010100020851 putative dehydrogenase 37691 38728 1
CDS - ZP_05439700.1 E4_010100020856 hypothetical protein 38851 39546 1
CDS - ZP_05439701.1 E4_010100020861 transcriptional regulator, LacI family protein 39770 40765 1
CDS gntK ZP_05439702.1 E4_010100020866 gluconate kinase 1 40943 41431 1
CDS - ZP_05439703.1 E4_010100020871 low affinity gluconate transporter 41435 42775 1
CDS - ZP_05439704.1 E4_010100020876 putative dITP- and XTP- hydrolase 42832 43425 -1
CDS - ZP_05439705.1 E4_010100020881 aspartate-semialdehyde dehydrogenase 43618 44721 1
CDS - ZP_05439706.1 E4_010100020886 glycogen branching enzyme 44994 47180 1
CDS - ZP_05439707.1 E4_010100020891 glycogen debranching enzyme 47177 49150 1
CDS glgC ZP_05439708.1 E4_010100020896 glucose-1-phosphate adenylyltransferase 49168 50463 1
CDS glgA ZP_05439709.1 E4_010100020901 glycogen synthase 50463 51896 1
CDS - ZP_05439710.1 E4_010100020906 glycogen phosphorylase 51915 54362 1
CDS - ZP_05439711.1 E4_010100020911 hypothetical protein 54491 54772 1
CDS glpD ZP_05439712.1 E4_010100020916 glycerol-3-phosphate dehydrogenase 54978 56483 -1
CDS glpE ZP_05439713.1 E4_010100020921 thiosulfate sulfurtransferase 56673 56999 1
CDS - ZP_05439714.1 E4_010100020926 intramembrane serine protease GlpG 57044 57874 1
CDS - ZP_05439715.1 E4_010100020931 DNA-binding transcriptional repressor GlpR 57891 58649 1
CDS - ZP_05439716.1 E4_010100020936 Sigma 54 interacting domain protein 58631 60229 -1
CDS - ZP_05439717.1 E4_010100020941 hypothetical protein 60418 61644 1
CDS - ZP_05439718.1 E4_010100020946 RNA 3'-terminal-phosphate cyclase 61645 62664 1
CDS - ZP_05439719.1 E4_010100020951 transcriptional regulator MalT 62707 65412 -1
CDS - ZP_05439720.1 E4_010100020956 glycogen/starch/alpha-glucan phosphorylase 66024 68417 1
CDS malQ ZP_05439721.1 E4_010100020961 4-alpha-glucanotransferase 68427 70511 1
CDS - ZP_05439722.1 E4_010100020966 gluconate transporter, high-affinity GNT I system 70622 71938 -1
CDS - ZP_05439723.1 E4_010100020971 putative DNA uptake protein 72298 72873 -1
CDS - ZP_05439724.1 E4_010100020976 gluconate periplasmic binding protein 72932 73615 -1
CDS - ZP_05439725.1 E4_010100020981 carboxylesterase BioH 73653 74423 1
CDS - ZP_05439726.1 E4_010100020986 hypothetical protein 74452 75330 -1
CDS - ZP_05439727.1 E4_010100020991 predicted DNA-binding transcriptional regulator 75533 75769 -1
CDS feoB ZP_05439728.1 E4_010100020996 ferrous iron transport protein B 75769 78090 -1
CDS feoA ZP_05439729.1 E4_010100021001 ferrous iron transport protein A 78107 78334 -1
CDS - ZP_05439730.1 E4_010100021006 transcriptional accessory protein 78791 81112 -1
CDS greB ZP_05439731.1 E4_010100021011 transcription elongation factor GreB 81209 81685 -1
CDS ompR ZP_05439732.1 E4_010100021016 osmolarity response regulator 81913 82632 1
CDS envZ ZP_05439733.1 E4_010100021021 osmolarity sensor protein 82629 83981 1
CDS - ZP_05439734.1 E4_010100021026 phosphoenolpyruvate carboxykinase 84057 85679 -1
CDS - ZP_05439735.1 E4_010100021031 hypothetical protein 85924 86052 1
CDS - ZP_05439736.1 E4_010100021036 predicted inner membrane protein 86058 87782 1
CDS hslO ZP_05439737.1 E4_010100021041 Hsp33-like chaperonin 87845 88723 -1
CDS - ZP_05439738.1 E4_010100021046 ribosome-associated heat shock protein Hsp15 88748 89149 -1
CDS - ZP_05439739.1 E4_010100021051 putative hydrolase 89160 89828 -1
CDS - ZP_05439740.1 E4_010100021056 putative inner membrane protein 89893 92028 -1
CDS nudE ZP_05439741.1 E4_010100021061 ADP-ribose diphosphatase NudE 92348 92908 1
CDS mrcA ZP_05439742.1 E4_010100021066 peptidoglycan synthetase 93074 95626 -1
CDS - ZP_05439743.1 E4_010100021071 putative pilus assembly protein 95746 96525 1
CDS - ZP_05439744.1 E4_010100021076 predicted fimbrial assembly protein 96525 97064 1
CDS - ZP_05439745.1 E4_010100021081 hypothetical protein 97048 97488 1
CDS - ZP_05439746.1 E4_010100021086 hypothetical protein 97478 97882 1
CDS hofQ ZP_05439747.1 E4_010100021091 outer membrane porin HofQ 97794 99032 1
CDS aroK ZP_05439748.1 E4_010100021096 shikimate kinase I 99433 99954 1
CDS aroB ZP_05439749.1 E4_010100021101 3-dehydroquinate synthase 100011 101099 1
CDS - ZP_05439750.1 E4_010100021106 hypothetical protein 101191 102477 1
CDS - ZP_05439751.1 E4_010100021111 DNA adenine methylase 102584 103420 1
CDS - ZP_05439752.1 E4_010100021116 ribulose-phosphate 3-epimerase 103438 104115 1
CDS - ZP_05439753.1 E4_010100021121 phosphoglycolate phosphatase 104108 104866 1
CDS - ZP_05439754.1 E4_010100021126 tryptophanyl-tRNA synthetase 104859 105863 1
CDS - ZP_05439755.1 E4_010100021131 hypothetical protein 106153 107058 1
CDS - ZP_05439756.1 E4_010100021136 hypothetical protein 107075 107437 1
CDS - ZP_05439757.1 E4_010100021141 putative amino acid racemase 107516 108679 1
CDS - ZP_05439758.1 E4_010100021146 putative mutase 108679 109905 1