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Herbaspirillum seropedicae SmR1, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaA ADJ61531.1 Hsero_0001 chromosomal replication initiator protein 1 1398 1
CDS dnaN ADJ61532.1 Hsero_0002 DNA polymerase III subunit beta protein 2012 3118 1
CDS gyrB ADJ61533.1 Hsero_0003 DNA gyrase subunit B protein 3255 5753 1
CDS - ADJ61534.1 Hsero_0004 cII phage-related protein 6198 7127 1
CDS - ADJ61535.1 Hsero_0005 conserved hypothetical protein 7184 8122 1
CDS - ADJ61536.1 Hsero_0006 reverse transcriptase of bacterial retrotransposons protein 8177 11245 1
CDS - ADJ61537.1 Hsero_0007 conserved hypothetical protein 11346 12347 1
CDS gabT ADJ61538.1 Hsero_0008 4-aminobutyrate aminotransferase protein 12433 13761 -1
CDS - ADJ61539.1 Hsero_0009 homoserine kinase type II protein 13986 14987 1
CDS - ADJ61540.1 Hsero_0010 AraC family transcription regulator protein 15047 16108 1
CDS - ADJ61541.1 Hsero_0011 major facilitator superfamily (MFS) transporter protein 16312 17625 1
CDS - ADJ61542.1 Hsero_0012 amidase family protein 17667 19115 1
CDS - ADJ61543.1 Hsero_0013 conserved hypothetical protein 19478 20413 1
CDS - ADJ61544.1 Hsero_0014 conserved hypothetical protein 20607 22787 1
CDS czcR ADJ61545.1 Hsero_0015 response regulator for cobalt/zinc/cadmium resistance transcription regulator protein 23342 24049 1
CDS czcS ADJ61546.1 Hsero_0016 transmembrane sensory transduction histidine kinase for cobalt/zinc/ cadmium resistance transcription regulator protein 24046 25449 1
CDS - ADJ61547.1 Hsero_0017 transcription regulator protein 25497 25766 -1
CDS - ADJ61548.1 Hsero_0018 membrane protein 26030 27307 1
CDS acs ADJ61549.1 Hsero_0019 acetyl-coenzyme A synthetase protein 27327 28976 -1
CDS - ADJ61550.1 Hsero_0020 VGR-related protein 29277 32018 1
CDS - ADJ61551.1 Hsero_0021 conserved hypothetical protein 32022 33752 1
CDS - ADJ61552.1 Hsero_0022 conserved hypothetical protein 33743 34816 1
CDS - ADJ61553.1 Hsero_0023 conserved hypothetical protein 34891 35952 1
CDS - ADJ61554.1 Hsero_0024 conserved hypothetical protein 35949 37553 1
CDS - ADJ61555.1 Hsero_0025 signal peptide protein 37678 38736 1
CDS - ADJ61556.1 Hsero_0026 hypothetical protein 38733 39218 1
CDS - ADJ61557.1 Hsero_0027 hypothetical protein 39209 39643 1
CDS - ADJ61558.1 Hsero_0028 conserved hypothetical protein 39733 40713 1
CDS - ADJ61559.1 Hsero_0029 conserved hypothetical protein 40765 41031 1
CDS - ADJ61560.1 Hsero_0030 methyl-accepting chemotaxis protein I protein 41074 42678 -1
CDS - ADJ61561.1 Hsero_0031 ABC-type transport system, ATPase component protein 42910 43548 -1
CDS - ADJ61562.1 Hsero_0032 hypothetical protein 43582 44049 -1
CDS - ADJ61563.1 Hsero_0033 TonB-dependent ferric siderophore receptor protein 44098 46470 -1
CDS fecR ADJ61564.1 Hsero_0034 Fe2+-dicitrate sensor, membrane component protein 46587 47597 -1
CDS fecI ADJ61565.1 Hsero_0035 RNA polymerase sigma-70 factor protein 47614 48159 -1
CDS - ADJ61566.1 Hsero_0036 hypothetical protein 48219 48794 -1
CDS - ADJ61567.1 Hsero_0037 permeases of the major facilitator superfamily protein 48997 50235 -1
CDS - ADJ61568.1 Hsero_0038 transcription regulator protein 50457 51365 1
CDS - ADJ61569.1 Hsero_0039 acyl-CoA transferase protein 51384 52886 -1
CDS - ADJ61570.1 Hsero_0040 LysR family transcription regulator protein 53060 53965 1
CDS - ADJ61571.1 Hsero_0041 membrane protein 54162 56297 1
CDS - ADJ61572.1 Hsero_0042 periplasmic binding protein 56383 57507 1
CDS - ADJ61573.1 Hsero_0043 hypothetical protein 57915 58427 1
CDS - ADJ61574.1 Hsero_0044 glutamine amidotransferase protein 58885 59634 1
CDS - ADJ61575.1 Hsero_0045 hypothetical protein 60124 60444 1
CDS - ADJ61576.1 Hsero_0046 major facilitator superfamily (MFS) transporter transmembrane protein 60729 62000 -1
CDS - ADJ61577.1 Hsero_0047 LysR family transcription regulator protein 62188 63078 1
CDS - ADJ61578.1 Hsero_0048 hypothetical protein 63221 63688 1
CDS - ADJ61579.1 Hsero_0049 hypothetical protein 63766 64104 1
CDS - ADJ61580.1 Hsero_0050 Fe2+ transport system protein A 64095 64346 1
CDS feoB ADJ61581.1 Hsero_0051 ferrous iron transport B transmembrane protein 64343 66169 1
CDS tdcB ADJ61582.1 Hsero_0052 threonine dehydratase protein 66473 67678 -1
CDS - ADJ61583.1 Hsero_0053 hypothetical protein 68024 68380 1
CDS ogt ADJ61584.1 Hsero_0054 methylated-DNA-protein-cysteine methyltransferase protein 68507 69079 1
CDS tauC ADJ61585.1 Hsero_0055 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component protein 69098 69964 -1
CDS tauB ADJ61586.1 Hsero_0056 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein 69973 70845 -1
CDS tauA ADJ61587.1 Hsero_0057 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein 70881 71909 -1
CDS - ADJ61588.1 Hsero_0058 hypothetical protein 71976 72131 -1
CDS - ADJ61589.1 Hsero_0059 hypothetical protein 72192 72311 -1
CDS kup ADJ61590.1 Hsero_0060 potassium uptake protein 72338 74239 1
CDS - ADJ61591.1 Hsero_0061 ornithine cyclodeaminase protein 74416 75459 1
CDS speB ADJ61592.1 Hsero_0062 arginase/agmatinase/formimionoglutamate hydrolase protein 75471 76379 1
CDS glnH ADJ61593.1 Hsero_0063 ABC-type glutamine transport system, periplasmic component protein 76570 77349 1
CDS glnP ADJ61594.1 Hsero_0064 ABC-type glutamine transport system, permease component protein 77496 78248 1
CDS glnQ ADJ61595.1 Hsero_0065 ABC-type glutamine transport system, ATPase component protein 78254 78976 1
CDS - ADJ61596.1 Hsero_0066 permease of the drug/metabolite transporter (DMT) superfamily protein 79037 79882 -1
CDS - ADJ61597.1 Hsero_0067 methyl transferase protein 79879 80577 -1
CDS - ADJ61598.1 Hsero_0068 conserved hypothetical protein 80685 80942 -1
CDS ntrX ADJ61599.1 Hsero_0069 two component response regulator protein 81374 82123 -1
CDS ntrY ADJ61600.1 Hsero_0070 two component sensor histidine kinase protein 82258 84540 -1
CDS - ADJ61601.1 Hsero_0071 proline rich signal peptide protein 84537 85187 -1
CDS rrmB ADJ61602.1 Hsero_0072 RNA methyltransferase (SUN protein) protein 85184 86458 -1
CDS - ADJ61603.1 Hsero_0073 conserved hypothetical protein 86691 87035 -1
CDS - ADJ61604.1 Hsero_0074 transmembrane protein 87206 87751 -1
CDS - ADJ61605.1 Hsero_0075 transmembrane protein 87886 89892 1
CDS cdsA ADJ61606.1 Hsero_0076 phosphatidate cytidiltransferase protein 89932 90873 -1
CDS plsC ADJ61607.1 Hsero_0077 1-acyl-sn-glycerol-3-phosphate acyltransferase protein 90891 91511 -1
CDS - ADJ61608.1 Hsero_0078 membrane-associated phospholipid phosphatase protein 92009 93448 -1
CDS - ADJ61609.1 Hsero_0079 lysophospholipase protein 93445 95196 -1
CDS - ADJ61610.1 Hsero_0080 CDP-alcohol phosphatidyltransferase protein 95193 95807 -1
CDS - ADJ61611.1 Hsero_0081 Mg(2+) chelatase family protein 95981 97504 -1
CDS - ADJ61612.1 Hsero_0082 conserved hypothetical protein 97578 97823 -1
CDS - ADJ61613.1 Hsero_0083 membrane protein 98251 99039 1
CDS glnK ADJ61614.1 Hsero_0084 nitrogen regulatory PII-like protein 99052 99390 1
CDS amtB ADJ61615.1 Hsero_0085 ammonium transporter transmembrane protein 99406 100938 1
CDS gshA ADJ61616.1 Hsero_0086 glutamate-cysteine ligase protein 101286 102587 1
CDS gshB ADJ61617.1 Hsero_0087 glutathione synthetase protein 102626 103576 1
CDS pts ADJ61618.1 Hsero_0088 phosphotransferase (PTS) system, mannose/fructose-specific component IIA protein 103603 104079 1
CDS ptsH ADJ61619.1 Hsero_0089 phosphocarrier protein HPr (Histidine-containing protein) protein 104133 104402 1
CDS ptsI ADJ61620.1 Hsero_0090 phosphoenolpyruvate-protein phosphotransferase transmembrane protein 104657 106444 1
CDS metX ADJ61621.1 Hsero_0091 homoserine O-acetyltransferase protein 106756 107895 1
CDS - ADJ61622.1 Hsero_0092 SAM-dependent methyltransferase protein 107892 108494 1
CDS ampG ADJ61623.1 Hsero_0093 muropeptide permease of the major facilitator superfamily protein 108596 109762 1
tRNA trnY - Hsero_0094 tRNA-Tyr 109986 110071 1
tRNA trnG - Hsero_0095 tRNA-Gly 110151 110224 1
tRNA trnT - Hsero_0096 tRNA-Thr 110271 110345 1
CDS tufB ADJ61624.1 Hsero_0097 EF-Tu elongation factor protein 110426 111616 1
tRNA trnW - Hsero_0098 tRNA-Trp 111690 111765 1
CDS secE ADJ61625.1 Hsero_0099 preprotein translocase SecE subunit transmembrane protein 111797 112177 1
CDS nusG ADJ61626.1 Hsero_0100 transcription antitermination protein 112179 112769 1